New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1730993	68 (1.070)	4 (0.070)	4/256	NT	6.2%	coding (95/1152 nt)	dapE	succinyl‑diaminopimelate desuccinylase
	?	NC_002947	= 1731041	55 (0.900)					coding (47/1152 nt)	dapE	succinyl‑diaminopimelate desuccinylase

GACCGGGCCGGTAGGCACCACGTCGGTGTGGCCGGCAAAACACAGTACCGGGCCGTCCTGGCTGCCGTGGGTGGCCCAGAAGTTGTCGACGTCTTCAATGCGCATCGGCTCCAGCTGGAAACCGACGGCGCCCAGACGGTTCATCATCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1730842‑1730993 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgACCTGATCCGTCGCCCCTCGGTCACCCCCGTCGACGCCGATTGCCAGGCGCAGATGATGAACCGTCTGGGCGCCGTCGGTTTCCAGCTGGAGCCGATGCGCATTGAAGACGTCGACAACTTCTGGGCCACCCACGGCAGCCAGGAC  <  NC_002947/1731041‑1730896                                                                                                                                                                                                                                                                                                            GACCGGGCCGGTAGGCACCACGTCGGTGTGGCCGGCAAAACACAGTACCGGGCCGTCCTGGCTGCCGTGGGTGGCCCAGAAGTTGTCGACGTCTTCAATGCGCATCGGCTCCAGCTGGAAACCGACGGCGCCCAGACGGTTCATCATCT                                                                                                                                                       <  5:31523/149‑1    CGGGCCGGTAGGCACCACGTCGGTGTGGCCGGCAAAACACAGTACCGGGCCGTCCTGGCTGCCGTGGGTGGCCCAGAAGTTGTCGACGTCTTCAATGCGCATCGGCTCCAGCTGGAAACCGACGGCGCCCAGACGGTTCATCATCTGCG                                                                                                                                                    >  6:155719/1‑149                          GTGTGGCCGGCAAAACACAGTACCGGGCCGTCCTGGCTGCCGTGGGTGGCCCAGAAGTTGTCGACGTCTTCAATGCGCATCGGCTCCAGCTGGAAACCGACGGCGCCCAGACGGTTCATCATCTGCGACCTGATCCGTCGCCCCTCGGT                                                                                                                              >  4:313172/1‑149                                                             GCTGCCGTGGGTGGCCCAGAAGTTGTCGACGTCTTCAATGCGCATCGGCTCCAGCTGGAAACCGACGGCGCCCAGACGGTTCATCATCTGCGACCTGATCCGTCGCCCCTCGGTCACCCCCGTCGACGCCGATTGCCAGGCGCAGAT                                                                                             <  3:313172/147‑1                                                                                           GTCTTCAATGCGCATCGGCTCCAGCTGGAAACCGACGGCGCCCAGACGGTTCATCATCTGCGACCTGATCCGTCGCCCCTCGGTCACCCCCGTCGACGCCGATTGCCAGGCGCAGATGATGAA                                                                                       <  5:368540/123‑1                                                                                           GTCTTCAATGCGCATCGGCTCCAGCTGGAAACCGACGGCGCCCAGACGGTTCATCATCTGCGACCTGATCCGTCGCCCCTCGGTCACCCCCGTCGACGCCGATTGCCAGGCGCAGATGATGAA                                                                                       >  6:368540/1‑123                                                                                                                                                      GCGACCTGATCCGTCGCCCCTCGGTCACCCCCGTCGACGCCGATTGCCAGGCGCAGATGATGAACCGTCTGGGCGCCGTCGGTTTCCAGCTGGAGCCGATGCGCATTGAAGACGTCGACAACTTCTGGGCCACCCACGGCAGCCAGGAC  >  4:385512/1‑149                                                                                                                                                                                                                                                                                                            GACCGGGCCGGTAGGCACCACGTCGGTGTGGCCGGCAAAACACAGTACCGGGCCGTCCTGGCTGCCGTGGGTGGCCCAGAAGTTGTCGACGTCTTCAATGCGCATCGGCTCCAGCTGGAAACCGACGGCGCCCAGACGGTTCATCATCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1730842‑1730993 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgACCTGATCCGTCGCCCCTCGGTCACCCCCGTCGACGCCGATTGCCAGGCGCAGATGATGAACCGTCTGGGCGCCGTCGGTTTCCAGCTGGAGCCGATGCGCATTGAAGACGTCGACAACTTCTGGGCCACCCACGGCAGCCAGGAC  <  NC_002947/1731041‑1730896

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.