| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1756750 | 61 (0.960) | 5 (0.080) | 5/252 | NT | 7.9% | coding (213/384 nt) | PP_1562 | terminase small subunit |
| ? | NC_002947 | = 1756768 | 58 (0.960) | coding (231/384 nt) | PP_1562 | terminase small subunit | |||||
CCCCAGCGGCGCCGCGAGGATGCCGAACCGGTGGGTGAGCTGACCGCGCCGCCGGCTCACATCAACGGAGCAGTGCTCCACGCCTGGAAGGAGATCGCGAAGTACGCCCCGCGGGACGTGCTCACCAACTCCGACCGACTCAGCCTGGAACTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1756598‑1756750‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaactgAGCCAGCAGGTTGGCGGCCAGTTCCAGGCTGAGTCGGTCGGAGTTGGTGAGCACGTCCCGCGGGGCGTACTTCGCGATCTCCTTCCAGGCGTGGAGCACTGCTCCGTTGATGTGAGCCGGCGGCGCGGTCAGCTCACCCACCGGT < NC_002947/1756768‑1756624 CCCCAGCGGCGCCGCGAGGATGCCGAACCGGTGGGTGAGCTGACCGCGCCGCCGGCTCACATCAACGGAGCAGTGCTCCACGCCTGGAAGGAGATCGCGAAGTACGCCCCGCGGGACGTGCTCACCAACTCCGACCGACTCAGCCTGG > 7:313627/1‑148 CCAGCGGCACCGCGAGGATGCCGAACCGGTGGGTGAGCTGACCGCGCCGCCGGCTCACATCAACGGAGCAGTGCTCCACGCCTGGAAGGAGATCGCGAAGTACGCCCCGCGGGACGTGCTCACCAACTCCGACCGACTCAGCCTGGAAC > 3:230083/1‑149 AGCGGCGCCGCGAGGATGCCGAACCGGTGGGTGAGCTGACCGCGCCGCCGGCTCACATCAACGGAGCAGTGCTCCACGCCTGGAAGGAGATCGCGAAGTACGCCCCGCGGGACGTGCTCACCAACTCCGACCGACTCAGCCTGGAACTG > 6:336975/1‑149 AGCGGCGCCGCGAGGATGCCGAACCGGTGGGTGAGCTGACCGCGCCGCCGGCTCACATCAACGGAGCAGTGCTCCACGCCTGGAAGGAGATCGCGAAGTACGCCCCGCGGGACGTGCTCACCAACTCCGACCGACTCAGCCTGGAACTG > 6:343235/1‑149 GCGAGGATGCCGAACCGGTGGGTGAGCTGACCGCGCCGCCGGCTCACATCAACGGAGCAGTGCTCCACGCCTGGAAGGAGATCGCGAAGTACGCCCCGCGGGACGTGCTCACCAACTCCGACCGACTCAGCCTGGAACTGAGCCAGCAG > 4:88945/1‑149 GGTGAGCTGACCGCGCCGCCGGCTCACATCAACGGAGCAGTGCTCCACGCCTGGAAGGAGATCGCGAAGTACGCCCCGCGGGACGTGCTCACCAACTCCGACCGACTCAGCCTGGAACTGAGCCAGCAGGTTGGCGGCCAGTTCCAGG < 3:88945/148‑1 GGCTCACATCAACGGAGCAGTGCTCCACGCCTGGAAGGAGATCGCGAAGTACGCCCCGCGGGACGTGCTCACCAACTCCGACCGACTCAGCCTGGAACTGAGCCAGCAGGTTGGCGGCCAGTTCCAG > 7:229165/1‑127 GGCTCACATCAACGGAGCAGTGCTCCACGCCTGGAAGGAGATCGCGAAGTACGCCCCGCGGGACGTGCTCACCAACTCCGACCGACTCAGCCTGGAACTGAGCCAGCAGGTTGGCGGCCAGTTCCAG < 8:229165/127‑1 GTGCTCCACGCCTGGAAGGAGATCGCGAAGTACGCCCCGCGGGACGTGCTCACCAACTCCGACCGACTCAGCCTGGAACTGAGCCAGCAGGTTGGCGGCCAGTTCCA < 4:1803/107‑1 GGAACTGAGCCAGCAGGTTGGCGGCCAGTTCCAGGCTGAGTCGGTCGGAGTTGGTGAGCACGTCCCGCGGGGCGTACTTCGCGATCTCCTTCCAGGCGT > 5:61092/1‑99 GGAACTGAGCCAGCAGGTTGGCGGCCAGTTCCAGGCTGAGTCGGTCGGAGTTGGTGAGCACGTCCCGCGGGGCGTACTTCGCGATCTCCTTCCAGGCGT < 6:61092/99‑1 ACTGAGCCAGCAGGTTGGCGGCCAGTTCCAGGCTGAGTCGGTCGGAGTTGGTGAGCACGTCCCGCGGGGCGTACTTCGCGATCTCCTTCCAGGCGTGGAGCACTGCTCCGTTGATGTGAGCCGGCGGCGCGGTCAGCTCACCCACCGGT < 4:385924/149‑1 CCCCAGCGGCGCCGCGAGGATGCCGAACCGGTGGGTGAGCTGACCGCGCCGCCGGCTCACATCAACGGAGCAGTGCTCCACGCCTGGAAGGAGATCGCGAAGTACGCCCCGCGGGACGTGCTCACCAACTCCGACCGACTCAGCCTGGAACTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1756598‑1756750‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaactgAGCCAGCAGGTTGGCGGCCAGTTCCAGGCTGAGTCGGTCGGAGTTGGTGAGCACGTCCCGCGGGGCGTACTTCGCGATCTCCTTCCAGGCGTGGAGCACTGCTCCGTTGATGTGAGCCGGCGGCGCGGTCAGCTCACCCACCGGT < NC_002947/1756768‑1756624 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |