New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 177089868 (1.070)6 (0.100) 6/248 NT 8.2% coding (1646/3000 nt) PP_1579 hypothetical protein
?NC_002947 = 1770925 71 (1.200)coding (1673/3000 nt) PP_1579 hypothetical protein

TCGACACCGGGTGGGCCGGCTTCACTGTGCGCACGCTGCTGGACTTCTCGCTTGGTGCGGACGGGGCTTCCACCCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCTGCCCGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1770742‑1770898
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccggcggTGGCCGTTGCTCTTGTACCAGGCCAAGCCGCCGGGCAGATAGAAGTCGTACTCGATGGTGTCGGTCAGCTCCTGCTCTGGCACCGCCATGAACGGCCCAAGCCAGTCCAGGGTGGAAGCCCCGTCCGCACCAAGCGAGAAGTC  <  NC_002947/1770925‑1770783
                                                                                                                                                                                                                                                                                                            
TCGACACCGGGTGGGCCGGCTTCACTGTGCGCACGCTGCTGGACTTCTCGCTTGGTGCGGACGGGGCTTCCACCCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCTG                                                                                                                                                         >  2:309633/1‑149
  GACACCGGGTGGGCCGGCTTCACTGTGCGCACGCTGCTGGACTTCTCGCTTGGTGCGGACGGGGCTTCCACCCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACCCCATCGAGTACGACTTCTATCTGCC                                                                                                                                                       >  4:77057/1‑149
  GACACCGGGTGGGCCGGCTTCACTGTGCGCACGCTGCTGGACTTCTCGCTTGGTGCGGACGGGGCTTCCACCCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCTGCC                                                                                                                                                       >  3:332630/1‑149
               CCGGCTTCACTGTGCGCACGCTGCTGGACTTCTCGCTTGGTGCGGACGGGGCTTCCACCCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCTGCCCGGCGGTGGCCGT                                                                                                                                          >  5:315826/1‑149
                                          ACTTCTCGCTTGGTGCGGACGGGGCTTCCACCCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCTGCCCGGCGGTGGCCGTTGCTCTTGTACCAGGCCAAGCCGCCGG                                                                                                               <  6:315826/149‑1
                                                           GACGGGGCTTCCACCCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCTGCCCGGCGGTGGCCGTTGCTCTTGTACCAGGCCAAGCCGCCG                                                                                                                >  1:105600/1‑131
                                                           GACGGGGCTTCCACCCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCTGCCCGGCGGTGGCCGTTGCTCTTGTACCAGGCCAAGCCGCCG                                                                                                                <  2:105600/131‑1
                                                              GGGGCTTCCACCCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCCGCCCGGCGGTGGCCGGTGCTCTTGTACCAGGCCAAGCCGCCGGGCAGATAGAAGTCGTACTCG                                                                                           >  7:163265/1‑149
                                                                         CCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCCGCCCGGCGGTGGCCGTTGCTCTTGTACCAGGCCAAGCCGCCGGGCAGATAGAAGTCGTACTCGATGGTGTCGGT                                                                                <  8:163265/149‑1
                                                                                                                                                    GCCCGGCGGTGGCCGTTGCTCTTGTACCAGGCCAAGCCGCCGGGCAGATAGAAGTCGTACTCGATGGTGTCGGTCAGCTCCTGCTCTGGCACCGCCATGAACGGCCCAAGCCAGTCCAGGGTGGAAGCCCCGTCCGCACCAAGCGAGAA     <  6:11468/149‑1
                                                                                                                                                    GCCCGGCGGTGGCCGTTGCTCTTGTACCAGGCCAAGCCGCCGGGCAGATAGAAGTCGTACTCGATGGTGTCGGTCAGCTCCTGCTCTGGCACCGCCATGAACGGCCCAAGCCAGTCCAGGGTGGAAGCCCCGTCCGCACCAAGCGAG       >  4:211488/1‑147
                                                                                                                                                       CGGCGGTGGCCGTTGCTCTTGTACCAGGCCAAGCCGCCGGGCAGATAGAAGTCGTACTCGATGGTGTCGGTCAGCTCCTGCTCTGGCACCGCCATGAACGGCCCAAGCCAGTCCAGGGTGGAAGCCCCGTCCGCACCAAGCGAGAAGTC  <  6:161409/149‑1
                                                                                                                                                                                                                                                                                                            
TCGACACCGGGTGGGCCGGCTTCACTGTGCGCACGCTGCTGGACTTCTCGCTTGGTGCGGACGGGGCTTCCACCCTGGACTGGCTTGGGCCGTTCATGGCGGTGCCAGAGCAGGAGCTGACCGACACCATCGAGTACGACTTCTATCTGCCCGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1770742‑1770898
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccggcggTGGCCGTTGCTCTTGTACCAGGCCAAGCCGCCGGGCAGATAGAAGTCGTACTCGATGGTGTCGGTCAGCTCCTGCTCTGGCACCGCCATGAACGGCCCAAGCCAGTCCAGGGTGGAAGCCCCGTCCGCACCAAGCGAGAAGTC  <  NC_002947/1770925‑1770783

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.