| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1774932 = | 64 (1.010) | 5 (0.080) | 5/258 | NT | 8.1% | coding (112/1077 nt) | PP_1582 | hypothetical protein |
| ? | NC_002947 | 1774986 = | 52 (0.840) | coding (166/1077 nt) | PP_1582 | hypothetical protein | |||||
CAGTAGGAACTGCGGGGCCGTCCTTGAAGGTGTTGGTCACCGGATCATAGAGCCCGATCAGGTTCCGGCTGTAGGGCACGAACATAATCAGCCCATTGGGCAATACGATGCAGCCGGCGAACTTGTCGTTCGCCACCGCAACGGATGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1775082‑1774932‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccAATGGGCTGATTATGTTCGTGCCCTACAGCCGGAACCTGATCGGGCTCTATGATCCGGTGACCAACACCTTCAAGGACGGCCCCGCAGTTCCTACTGGAAGCGCCCGCTATCGCGGTGGATGCCTTCATGCCGAAACCGGCA > NC_002947/1774986‑1775127 CAGTAGGAACTGCGGGGCCGTCCTTGAAGGTGTTGGTCACCGGATCATAGAGCCCGATCAGGTTCCGGCTGTAGGGCACGAACATAATCAGCCCATTGGGCAATACGATGCAGCCGGCGAACTTGTCGTTCGCCACCGCAACGGATGGC > 5:86215/1‑149 ACCGGATCATAGAGCCCGATCAGGTTCCGGCTGTAGGGCACGAACATAATCAGCCCATTGGGCAATACGATGCAGCCGGCGAACTTGTCGTTCGCCACCGCAACGGATGG < 5:288497/110‑1 ACCGGATCATAGAGCCCGATCAGGTTCCGGCTGTAGGGCACGAACATAATCAGCCCATTGGGCAATACGATGCAGCCGGCGAACTTGTCGTTCGCCACCGCAACGGATGG > 6:288497/1‑110 CACGAACATAATCAGCCCATTGGGCAATACGATGCAGCCGGCGAACTTGTCGTTCGCCAACGCAACGGATGGCCCAATGGGCTGATTATGTTCGTGCCCTACAGCCGGAACCTGATCGGGCTCTATGATCCGGTta > 2:227103/1‑134 GGCAATACGATGCAGCCGGCGAACTTGTCGTTCGCCACCGCAACGGATGGCCCAATGGGCTGATTATGTTCGTGCCCTACAGCCGGAACCTGATCGGGCTCTATGATCCGGTGACCAACACCTTCAA < 3:227119/127‑1 GGCAATACGATGCAGCCGGCGAACTTGTCGTTCGCCACCGCAACGGATGGCCCAATGGGCTGATTATGTTCGTGCCCTACAGCCGGAACCTGATCGGGCTCTATGATCCGGTGACCAACACCTTCAA > 4:227119/1‑127 GCAATACGATGCAGCCGGCGAACTTGTCGTTCGCCACCGCAACGGATGGCCCAATGGGCTGATTATGTTCGTGCCCTACAGCCGGAACCTGATCGGGCTCTATGATCCGGTGACCAACACCTTCAAGGACGGCCCCGCAGTTCCTA < 7:158920/146‑1 GCAATACGATGCAGCCGGCGAACTTGTCGTTCGCCACCGCAACGGATGGCCCAATGGGCTGATTATGTTCGTGCCCTACAGCCGGAACCTGATCGGGCTCTATGATCCGGTGACCAACACCTTCAAGGACGGCCCCGCAGTTCCTA > 8:158920/1‑146 CAATGGGCTGATTATGTTCGTGCCCTACAGCCGGAACCTGATCGGGCTCTATGATCCGGTGACCAACACCTTCAAGGACGGCCCCGCAGTTCCTACTGGAAGCGCCCGCTATCGCGGTGGATGCCTTCATGCCGAAACCGGCA < 5:230460/143‑1 CAATGGGCTGATTATGTTCGTGCCCTACAGCCGGAACCTGATCGGGCTCTATGATCCGGTGACCAACACCTTCAAGGACGGCCCCGCAGTTCCTACTGGAAGCGCCCGCTATCGCGGTGGATGCCTTCATGCCGAAACCGGCA > 6:230460/1‑143 CAGTAGGAACTGCGGGGCCGTCCTTGAAGGTGTTGGTCACCGGATCATAGAGCCCGATCAGGTTCCGGCTGTAGGGCACGAACATAATCAGCCCATTGGGCAATACGATGCAGCCGGCGAACTTGTCGTTCGCCACCGCAACGGATGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1775082‑1774932‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccAATGGGCTGATTATGTTCGTGCCCTACAGCCGGAACCTGATCGGGCTCTATGATCCGGTGACCAACACCTTCAAGGACGGCCCCGCAGTTCCTACTGGAAGCGCCCGCTATCGCGGTGGATGCCTTCATGCCGAAACCGGCA > NC_002947/1774986‑1775127 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |