New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1834755 =	51 (0.800)	4 (0.060)	4/258	NT	6.9%	coding (614/780 nt)	fpr‑I	ferredoxin‑‑NADP(+) reductase
	?	NC_002947	1834812 =	58 (0.940)					coding (671/780 nt)	fpr‑I	ferredoxin‑‑NADP(+) reductase

ACGTTCGATCAGGTAGTCACCCGGCTCGCGCATGCGCGGGGAGATCTTCAGGCCGAAGCTGTCCAGCACTTCGCTGGTCTCGTCGAGCATGCTCGGGCTGCCGCAGATCATCGCGCGGTCGTCTTGCGGGTTGATCGGCGGCAGGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1834903‑1834755 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgaGCATGCTCGACGAGACCAGCGAAGTGCTGGACAGCTTCGGCCTGAAGATCTCCCCGCGCATGCGCGAGCCGGGTGACTACCTGATCGAACGTGCCTTCGTCGAGAAGTAAGGCGCAGGCGGGTAGAGGAAGGCGACTTTCGGGTCGC  >  NC_002947/1834812‑1834958                                                                                                                                                                                                                                                                                                          ACGTTCGATCAGGTAGTCACCCGGCTCGCGCATGCGCGGGGAGATCTTCAGGCCGAAGCTGTCCAGCACTTCGCTGGTCTCGTCGAGCATGCTCGGGCTGCCGCAGATCATCGCGCGGTCGTCTTGCGGGTTGATCGGCGGCAGGCCGA                                                                                                                                                     <  4:340719/149‑1                                                                                               GGGCTGCCGCAGATCATCGCGCGGTCGTCTTGCGGGTTGATCGGCGGCAGGCCGAGCATGCTCGACGAGACCAGCGAAGAGCTGGACAGCTTCGGCCTGAAGATCTCCCCGCGCATGCGCGAGGCGGGTGACTACCTGATCGAACGTGC                                                       >  2:208844/1‑149                                                                                                GGCTGCCGCAGATCATCGCGCGGTCGTCTTGCGGGTTGATCGGCGGCAGGCCGAGCATGCTCGACGAGACCAGCGAAGTGCTGGACAGCTTCGGCCTGAAGATCTCCCCGCGCATGCGCGAGCCGGGTGACTACCTGATCGAACGTGCC                                                      >  6:84780/1‑149                                                                                                     CCGCAGATCATCGCGCGGTCGTCTTGCGGGTTGATCGGCGGCAGGCCGAGCATGCTCGACGAGACCAGCGAAGTGCTGGACAGCTTCGGCCTGAAGATCTCCCCGCGCATGCGCGAGCCGGGTGACTACCTGATCGAACGTGCCTTCGT                                                 >  7:276441/1‑149                                                                                                                                GGGTTGATCGGCGGCAGGCCGAGCATGCTCGACGAGACCAGCGAAGTGCTGGACAGCTTCGGCCTGAAGATCTCCCCGCGCATGCGCGAGCCGGGTGACTACCTGATCGAACGTGCCTTCGTCGAGAAGTAAGGCGCAGGCGGGTAGAG                      <  5:84780/149‑1                                                                                                                                                 gtCGAGCATGCTCGACGAGACCAGCGAAGTGCTGGACAGCTTCGGCCTGAAGATCTCCCCGCGCATGCGCGAGCCGGGTGACTACCTGATCGAACGTGCCTTCGTCGAGAAGTAAGGCGCAGGCGGGTAGAGGAAGGCGACTTTCGGGT     >  6:221955/3‑149                                                                                                                                                  CCGAGCATGCTCGACGAGACCAGCGAAGTGCTGGACAGCTTCGGCCTGAAGATCTCCCCGCGCATGCGCGAGCCGGGTGACTACCTGATCGAACGTGCCTTCGTCGAGAAGTAAGGCGCAGGCGGGTAGAGGAAGACGACTTTCGGGTC    >  3:265620/1‑149                                                                                                                                                    GAGCATGCTCGACGAGACCAGCGAAGTGCTGGACAGCTTCGGCCTGAAGATCTCCCCGCGCATGCGCGAGCCGGGTGACTACCTGATCGAACGTGCCTTCGTCGAGAAGTAAGGCGCAGGCGGGTAGAGGAAGGCGACTTTCGGGTCGC  >  1:360467/1‑149                                                                                                                                                    GAGCATGCTCGACGAGACCAGCGAAGTGCTGGACAGCTTCGGCCTGAAGATCTCCCCGCGCATGCGCGAGCCGGGTGACTACCTGATCGAACGTGCCTTCGTCGAGAAGTAAGGCGCAGGCGGGTAGAGGAAGGCGACTTTCGGGTCGC  >  4:73200/1‑149                                                                                                                                                    GAGCATGCTCGACGAGACCAGCGAAGTGCTGGACAGCTTCGGCCTGAAGATCTCCCCGCGCATGCGCGAGCCGGGTGACTACCTGATCGAACGTGCCTTCGTCGAGAAGTAAGGCGCAGGCGGGTAGAGGAAGGCGACTTTCGGGTCGC  >  8:48661/1‑149                                                                                                                                                                                                                                                                                                          ACGTTCGATCAGGTAGTCACCCGGCTCGCGCATGCGCGGGGAGATCTTCAGGCCGAAGCTGTCCAGCACTTCGCTGGTCTCGTCGAGCATGCTCGGGCTGCCGCAGATCATCGCGCGGTCGTCTTGCGGGTTGATCGGCGGCAGGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1834903‑1834755 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgaGCATGCTCGACGAGACCAGCGAAGTGCTGGACAGCTTCGGCCTGAAGATCTCCCCGCGCATGCGCGAGCCGGGTGACTACCTGATCGAACGTGCCTTCGTCGAGAAGTAAGGCGCAGGCGGGTAGAGGAAGGCGACTTTCGGGTCGC  >  NC_002947/1834812‑1834958

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.