New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1870604 | 84 (1.320) | 4 (0.070) | 4/256 | NT | 5.3% | coding (794/924 nt) | cobD | Subunit of adenosylcobinamide‑phosphate synthase beta component |
? | NC_002947 | = 1870672 | 63 (1.030) | coding (862/924 nt) | cobD | Subunit of adenosylcobinamide‑phosphate synthase beta component |
TGCACTGTTGGGCAAGACCCGCCTGGCCCTGGCCTGCTGGCGCAAGCAGGGCCCGCTGTGGGACAGCCCCAACGCCGGGCCGGTGATGGCTGCCGGCGCCGGTGCGCTGGGCGTGGAGCTTGGTGGCCCGGCGGTGTACCACGGCGAACTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1870452‑1870604 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcaCCAGCTGCCAGCCGCGCTCGATGGCATCGGCATCGGCCACTGGCCCCTCGCCCAGACGCGGCCGCTCATGCAGTTCG < NC_002947/1870672‑1870596 TGCACTGCTGGGCAAGACCCGCCTGGCCCTGGCCTGCTGGCGCAAGCAGGGCCCGCTGTGGGACAGCCCCAACGCCGGGCCGGTGATGGCTGCCGGCGCCGGTGCGCTGGGCGTGGAGCTTGGTGGCCCGGCGGTGTACCACGGCGAAC < 3:144758/149‑1 CACTGTTGGGCAAGACCCGCCTGGCCCTGGCCTGCTGGCGCAAGCAGGGCCCGCTGTGGGACAGCCCCAACGCCGGGCCGGTGATGGCTGCCGGCGCCGGTGCGCTGGGCGTGGAGCTTGGTGGCCCGGCGGTGTACCACGGCGAACT < 7:212632/148‑1 CACTGTTGGGCAAGACCCGCCTGGCCCTGGCCTGCTGGCGCAAGCAGGGCCCGCTGTGGGACAGCCCCAACGCCGGGCCGGTGATGGATGCCGGCGCCGGTGCGCTGGGCGTGGAGCTTGGTGGCCCGGCGGTGTACCCCGGCGAACTG > 4:307948/1‑149 ACTGTTGGGCAAGACCCGCCTGGCCCTGGCCTGCTGGCGCAAGCAGGGCCCGCTGTGGGACAGCCCCAACGCCGGGCCGGTGATGGCTGCCGGCGCCGGTGCGCTGGGCGTGGAGCTTGGTGGCCCGGCGGTGTACCACGGCGAACTGC < 4:26225/149‑1 ACTGTTGGGCAAGACCCGCCTGGCCCTGGCCTGCTGGCGCAAGCAGGGCCCGCTGTGGGACAGCCCCAACGCCGGGCCGGTGATGGCTGCCGGCGCCGGTGCGCTGGGCGTGGAGCTTGGTGGCCCGGCGGTGTACCACGGCGAACTG > 1:246560/1‑148 CTGTGGGACAGCCCCAACGCCGGGCCGGTGATGGCTGCCGGCGCCGGTGCGCTGGGCGTGGAGCTTGGTGGCCCGGCGGTGTACCACGGCGAACTGCACCAGCTGCCAGCCGCGCTCGATGGCATCGGCATCGGCCACTGGCCCCTCGC > 3:329548/1‑149 ACGCCGGGCCGGTGATGGCTGCCGGCGCCGGTGCGCTGGGCGTGGAGCTTGGTGGCCCGGCGGTGTACCACGGCGAACTGCACCAGCTGCCAGCCGCGCTCGATGGCATCGGCATCGGCCACTGGCCCCTCGCCCAGACGCGGCCGCTC < 4:329548/149‑1 GCCGGTGATGGCTGCCGGCGCCGGTGCGCTGGGCGTGGAGCTTGGTGGCCCGGCGGTGTACCACGGCGAACTGCACCAGCTGCCAGCCGCGCTCGATGGCATCGGCATCGGCCACTGGCCCCTCGCCCAGACGCGGCCGCTCATGCAGT > 3:59504/1‑149 GGTGATGGCTGCCGGCGCCGGTGCGCTGGGCGTGGAGCTTGGTGGCCCGGCGGTGTACCACGGCGAACTGCACCAGCTGCCAGCCGCGCTCGATGGCATCGGCATCGGCCACTGGCCCCTCGCCCAGACGCGGCCGCTCATGCAGTTCG < 4:59504/149‑1 TGCACTGTTGGGCAAGACCCGCCTGGCCCTGGCCTGCTGGCGCAAGCAGGGCCCGCTGTGGGACAGCCCCAACGCCGGGCCGGTGATGGCTGCCGGCGCCGGTGCGCTGGGCGTGGAGCTTGGTGGCCCGGCGGTGTACCACGGCGAACTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1870452‑1870604 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcaCCAGCTGCCAGCCGCGCTCGATGGCATCGGCATCGGCCACTGGCCCCTCGCCCAGACGCGGCCGCTCATGCAGTTCG < NC_002947/1870672‑1870596 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |