New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1947800	42 (0.660)	6 (0.120)	6/214	NT	12.8%	intergenic (‑61/+109)	PP_1748/PP_1749	hypothetical protein/acetyltransferase
	?	NC_002947	= 1947867	48 (0.940)					intergenic (‑128/+42)	PP_1748/PP_1749	hypothetical protein/acetyltransferase

CCACGTAGCGCACGATGGTGTCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1947628‑1947800 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgtgggagcggccttgtgtcgcgaaTGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAGACTGCAAAATTTTAACCCGACCGGAGGCCTGGACATGTCCGAACGACTCCCC  <  NC_002947/1947867‑1947722                                                                                                                                                                                                                                                                                                                                 CCACGTAGCGCACGATGGTGTCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTT                                                                                                                                                                            <  2:170336/149‑1  CACGTAGCGCACGATGGTGTCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTG                                                                                                                                                                           >  4:223968/1‑149   ACGTAGCGCACGATGGTGTCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCAAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTAGGCTTATAATTTTGCAGTCTTGT                                                                                                                                                                          >  6:271099/1‑149     GTAGCGCACGATGGTGTCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGG                                                                                                                                                                        <  3:223968/149‑1     GTAGCGCACGATGGTGTCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGGCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGG                                                                                                                                                                        <  1:303243/149‑1           CACGATGGTGTCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGG                                                                                                                                                                  >  3:21364/1‑149            ACGATGGTGTCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGC                                                                                                                                                                 >  7:155229/1‑149              GATGGTGTCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCT                                                                                                                                                               >  3:227074/1‑149              GATGGTGTCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGAGGCCT                                                                                                                                                               >  8:256211/1‑149              GATGGTGTCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGAAGTCTTGTGGGAGCagact                                                                                                                                                               >  8:251784/1‑144                        GTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTCGTGTCGCG                                                                                                                                                      >  4:206800/1‑148                          GAAGCCGGAGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTATGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTACAGGACTACGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTTTGTAGCGA                                                                                                                                                     >  7:50939/1‑147                                            GATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCC                                                                                                                                  >  5:292461/1‑148                                                GCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGC                                                                                                                                                       >  8:356372/1‑123                                                GCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGCGTCGC                                                                                                                                                       <  7:356372/123‑1                                                                                GTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTTTCGCGAATTGGGTGCGAAGCGCCCCTAGGGTCTAAGCTTAGCTGCCGATATTGCAGGGGCCG                                                                                             >  2:36792/1‑149                                                                                                   AGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGA                                                                          <  1:158289/149‑1                                                                                                       GTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTATGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACAC                                                                       <  5:271099/148‑1                                                                                                          CGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAG                                                                    <  6:292461/148‑1                                                                                                                   CCAGGCCTCCGGTCGGGTTAAAATTTTGCTGTCTTGTGGGAGCGGCCTTGTGTCGCTAATGGGGGGCGATGCGCCCCTAGGGTCTCAGCTTCGCTGCCTATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCA                                                          <  1:36792/149‑1                                                                                                                                                         gcAGCGGCGTTGTGTCGCGAATGGGGGGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAGACTGCAAAATTTTAACCCGACCGGAGGCCTGGAC                    <  7:272076/147‑1                                                                                                                                                         GGAGCGGCCTTGTGTCGCTATTGGGGTGCTAAGCGCCCCTAGGGTCTCAGCTTCGCTCCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACATGGCCGCTCCCACAAGACTGCAAAATTTTAACCCGACCGGAGGCCTGGA                     <  5:390144/148‑1                                                                                                                                                               GCCTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAGACTGCAAAATTTTAACCCGACCGGAGGCCTGGACATGTCC              >  6:91069/1‑149                                                                                                                                                                 CTTGTGTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAGACTGCAAAATTTTAACCCGACCGGAGGCCTGGACATGTCCG             >  1:288170/1‑148                                                                                                                                                                      GTCGCTAATGGGGTGCGAAGCGCCCATAGGGTCTCAGCTTCGCTGCCTATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCTACACAAGGCCGCTCCCACAAGACTGCAAAATTTTAACCCGACCGGAGGCCTGGACATGTCCGAACGA        <  7:7033/148‑1                                                                                                                                                                      GTCGCGAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAGACTGCAAAATTTTAACCCGCCCGGAGGCCGGGACATGTCCGCACGAC       >  4:21364/1‑149                                                                                                                                                                       TCGCTAATGGGGGCCGACGCGCCCTTAGGGGCTCACCTGCGCGGCCTATATTGCCGGGGCCGCTTTGCGGCCCTTGCGCGACACAAGGCCGCTCCCACAAGACTGCAAAATTTTAACCCGACCGGAGGCCTGGACATGTCCGAACGAC       <  3:329869/148‑1                                                                                                                                                                           GAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAGACTGCAAAATTTTAACCCGACCGGAGGCCTGGACATGTCCGAACGACTCCCC  >  3:250293/1‑149                                                                                                                                                                           GAATGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAGACTGCAAAATTTTAACCCGACCGGAGGCCTGGACATGTCCGAACGACTCCCC  <  2:288170/149‑1                                                                                                                                                                           GAATGGGGTGCGAAGCGCCCCTAGGGTCACAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGCCACAAGGCCGCGGCCCCAAGACTGCAAAATTTTAACCCGACCGGCGGCCGGGGCATGGCCGAACGCCTCCCC  >  1:222062/1‑149                                                                                                                                                                                                                                                                                                                                 CCACGTAGCGCACGATGGTGTCGGTGAAGCCGGTGGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCAGTCTTGTGGGAGCGGCCTTGTGTCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1947628‑1947800 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgtgggagcggccttgtgtcgcgaaTGGGGTGCGAAGCGCCCCTAGGGTCTCAGCTTCGCTGCCGATATTGCCGGGGCCGCTTTGCGGCCCTTTCGCGACACAAGGCCGCTCCCACAAGACTGCAAAATTTTAACCCGACCGGAGGCCTGGACATGTCCGAACGACTCCCC  <  NC_002947/1947867‑1947722

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.