New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2086080 = | NA (NA) | 6 (0.100) | 6/256 | NT | NA | coding (195/1302 nt) | PP_1865 | transposase |
? | NC_002947 | 2086120 = | NA (NA) | coding (235/1302 nt) | PP_1865 | transposase |
GGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGCGCGCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2086231‑2086080 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgccCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAAGCGTCTTGGCGCGTTGC > NC_002947/2086120‑2086267 GGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGCGCGCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCT < 6:102603/149‑1 GCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGCGCGCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTG < 6:24666/149‑1 GCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGCGCGCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCT < 6:57726/148‑1 GCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGCGCGCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCT < 2:69627/148‑1 TGCCATCGACCACCCGAACTTGGCAATCAGGAAGCATGGCTGAGCAGCCAAACTCATGGATTGTCGGCGCCAAGCGCTGCGCGCAGCCTGTCACCAGAGAACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTGCAGAGCTGC > 8:349175/1‑148 TGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGCGCGCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCC > 3:135635/1‑149 TGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGCGCGCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGC > 7:314445/1‑148 TGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGCGCGCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGC > 4:333881/1‑148 TGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGCGCGCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGC > 5:94445/1‑148 CATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGCGCGCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCT < 6:123895/143‑1 CATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGCGCGCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCT > 5:123895/1‑143 ACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTAAAGAGCTGGCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGATTGGCGGCGACAATGCATGAGTTGGCCTGCTCAGCCATTCTTCCTGATTGGGAAGTTCGGGTGG > 1:260312/1‑149 AACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATC < 8:359127/96‑1 AACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATC > 7:359127/1‑96 ACAGGGCAGGTTCTGTTCGACTGATCTTGTCGTACAGAGCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGG < 2:137427/140‑1 ACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCAGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGacagcgg > 1:137427/1‑141 AGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGAGGG > 8:162578/1‑149 CTGCCCTGTTGCGTGCTCTAGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAAGCGTCTTGGCGCG > 5:342183/1‑149 GCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTTGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAAGCGTCTTGGCGCaac < 3:80853/149‑4 GCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAAGCGTCTTGGCGCGTT > 5:371762/1‑149 GCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAAGCGTCTTGGCGCGTT > 8:21712/1‑149 GCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAAGCGTCTTGGCGCGTT < 1:35473/149‑1 GCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAAGCGTCTTGGCGCGTT > 2:359941/1‑149 GCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTC > 6:98060/1‑125 GCCCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTC < 5:98060/125‑1 CCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAAGCGTCTTGGCGCGTTGC > 8:141955/1‑149 CCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAAGCGTCTTGGCGCGTTGC > 2:170894/1‑149 CCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAAGCGTCTTGGCGCGTTGC > 8:214428/1‑149 CCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAAGCGTCTTGGCGCGTTGC > 5:189560/1‑149 GGCTGCCATCGACCACCCGAACTTGCCAATCAGGAAGCATGGCTGAGCAGCCCAACTCATGGATTGTCGGCGCCAAGCGCTGCGCGCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2086231‑2086080 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgccCTGTTGCGTGCTCTGGTGACAGGCTGCGCGCAGCGCTTGGCGCCGACAATCCATGAGTTGGGCTGCTCAGCCATGCTTCCTGATTGGCAAGTTCGGGTGGTCGATGGCAGCCACTTGGCCTCTACCGAAAAGCGTCTTGGCGCGTTGC > NC_002947/2086120‑2086267 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |