| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2211258 | 52 (0.820) | 4 (0.070) | 4/256 | NT | 6.8% | coding (649/1167 nt) | PP_1954 | hypothetical protein |
| ? | NC_002947 | = 2211283 | 60 (0.980) | coding (674/1167 nt) | PP_1954 | hypothetical protein | |||||
GCAGCAAGCCTCGCCGAGTTGATGGACCAGCGCTTGTTTAGCCGGCTGGGTATGTCCTCGACGTCCCTCGGCCCAACATCCCAGATCCGAGATCGACTGGTGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2211153‑2211258‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacCCGCCCTCTGGGAAGTCAGAGGTCAGTGGCACCAGTCGATCTCGGATCTGGGATGTTGGGCCGAGGGACGTCGAGGACATACCCAGCCGGCTAAACAAGCGCTGGTCCATCAACTCGGCGAGGCTTGCTGCACCGTGAACTCGACGAA < NC_002947/2211283‑2211136 GCAGCAAGCCTCGCCGAGTTGATGGACCAGCGCTTGTTTAGCCGGCTGGGTATGTCCTCGACGTCCCTCGGCCCAACATCCCAGATCCGAGATCGACTGGTGCCACCCGCCCTCTGGGAAGTCAGAGGTCAGTGGCACCAGT < 1:186577/142‑1GCAGCAAGCCTCGCCGAGTTGATGGACCAGCGCTTGTTTAGCCGGCTGGGTATGTCCTCGACGTCCCTCGGCCCAACATCCCAGATCCGAGATCGACTGGTGCCACCCGCCCTCTGGGAAGTCAGAGGTCAGTGGCACCAGT > 2:186577/1‑142 GACCAGCGCTTGTTTAGCCGGCTGGGTATGTCCTCGACGTCCCTCGGCCCAACATCCCAGATCCGAGATCGACTGGTGCCACCCGCCCTCTGGGAAGTCAGAGGTCAGTGG < 5:173740/111‑1 GACCAGCGCTTGTTTAGCCGGCTGGGTATGTCCTCGACGTCCCTCGGCCCAACATCCCAGATCCGAGATCGACTGGTGCCACCCGCCCTCTGGGAAGTCAGAGGTCAGTGG > 6:173740/1‑111 CCACCCGCCCTCTGGGAAGTCAGAGGTCAGTGGCACCAGTCGATCTCGGATCTGGGATGTTGGGCCGAGGGACGTCGAGGACATACCCAGCCGGCTAAACAAGCGCTGGTCCATCAACTCGGCGAGGCTTGCTGCACCGTGAACTCGAC > 2:368378/1‑149 ACCCGCCCTCTGGGAAGTCAGAGGTCAGTGGCACCAGTCGATCTCGGATCTGGGATGTTGGGCCGAGGGACGTCGAGGACATACCCAGCCGGCTAAACAAGCGCTGGTCCATCAACTCGGCGAGGCTTGCTGCACCGTGAACTCGACG > 4:256395/1‑148 CCCGCCCTCTGGGAAGTCAGAGGTCAGTGGCACCAGTCGATCTCGGATCTGGGATGTTGGGCCGAGGGACGTCGAGGACATACCCAGCCGGCTAAACAAGCGCTGGTCCATCAACTCGGCGAGGCTTGCTGCACCGTGAACTCGACGAA > 6:335389/1‑149 GCAGCAAGCCTCGCCGAGTTGATGGACCAGCGCTTGTTTAGCCGGCTGGGTATGTCCTCGACGTCCCTCGGCCCAACATCCCAGATCCGAGATCGACTGGTGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2211153‑2211258‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacCCGCCCTCTGGGAAGTCAGAGGTCAGTGGCACCAGTCGATCTCGGATCTGGGATGTTGGGCCGAGGGACGTCGAGGACATACCCAGCCGGCTAAACAAGCGCTGGTCCATCAACTCGGCGAGGCTTGCTGCACCGTGAACTCGACGAA < NC_002947/2211283‑2211136 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |