New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2227868 =	61 (0.960)	5 (0.080)	5/250	NT	7.7%	coding (21/987 nt)	holB	DNA polymerase III subunit delta'
	?	NC_002947	2227930 =	62 (1.040)					coding (83/987 nt)	holB	DNA polymerase III subunit delta'

CAAGCGTCCAGGCCCTGCGGCTGCTGGCACAACAGGCGCGCCATCAGACGCTCGGCCATGGCTCGCTTGCCAATACCCTGCGGCCCATGCAGCAGGTAAGCGTGGGCGTGGCGGCTGCGACCGGCCAGTTGCTGCCACAGCGCCTGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2228017‑2227868 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgctgcATGGGCCGCAGGGTATTGGCAAGCGAGCCATGGCCGAGCGTCTGATGGCGCGCCTGTTGTGCCAGCAGCCGCAGGGCCTGGACGCTTGTGGGGCGTGTAAGTCGTGCCTGTTGCTCAAGGCCGGCAGCCACCCGGACAACTTCGTCC  >  NC_002947/2227930‑2228076                                                                                                                                                                                                                                                                                                           CAAGCGTCCAGGCCCTGCGGCTGCTGGCACAACAGGCGCGCCATCAGACGCTCGGCCATGGCTCGCTTGCCAATACCCTGCGGCCCATGCAGCAGGTAAGCGTGGGCGTGGCGGCTGCGACCGGCCAGTTGCTGCCACAGCGCCTGCTG                                                                                                                                                      >  5:248267/1‑149  AAGCGTCCAGGCCCTGCGGCTGCTGGCACAACAGGCGCGCCATCAGACGCTCGGCCATGGCTCGCTTGCCAATACCCTGCGGCCCATGCAGCAGGTAAGCGTGGGCGTGGCGGCTGCGACCGGCCAGTTGCTGCCACAGCGCCTGCTGC                                                                                                                                                     >  5:70197/1‑149                                                                                    CCCATGCAGCAGGTAAGCGTGGGCGTGGCGGCTGCGACCGGCCAGTTGCTGCCACAGCGCCTGCTGCATGGGCCGCAGGGTATTGGCAAGCGAGCCATGGCCGAGCGTCTGATGGCGCGCCTGTTGTGCCAGCAGCCGCAGGGCCTGGA                                                                   >  2:133909/1‑149                                                                                      CATGCAGCAGGTAAGCGTGGGCGTGGCGGCTGCGACCGGCCAGTTGCTGCCACAGCGCCTGCTGCATGGGCCGCAGGGTATTGGCAAGCGAGCCATGGCCGAGCGTCTGATGGCGCGCCTGTTGTGCCAGCAGCCGCAGGGCCTGGACG                                                                 >  6:50492/1‑149                                                                                        TGCAGCAGGTAAGCGTGGGCGTGGCGGCTGCGACCGGCCAGTTGCTGCCACAGCGCCTGCTGCATGGGCCGCAGGGTATTGGCAAGCGAGCCATGGCCGAGCGTCTGATGGCGCGCCTGTTGTGCCAGCAGCCGCAGGGCCTGGACGCT                                                               >  5:42032/1‑149                                                                                                                   CTGCGACCGGCCAGTTGCTGCCACAGCGCCTGCTGCATGGGCCGCAGGGTATTGGCAAGCGAGCCATGGCCGAGCGTCTGATGGCGCGCCTGTTGTGCCAGCAGCCGCAGGGCCTGGACGCTTGTGGGGCGTGTAAGTCGTGCCTGTTG                                    <  5:50492/149‑1                                                                                                                      CGACCGGCCAGTTGCTGCCACAGCGCCTGCTGCATGGGCCGCAGGGTATTGGCAAGCGAGCCATGGCCGAGCGTCTGATGGCGCGCCTGTTGTGCCAGCAGCCGCAGGGCCTGGACGCTTGTGGGGCGTGTAAGTCGTGCCTGTTGC                                   <  1:133909/147‑1                                                                                                                                                    TGCATGGGCCGCAGGGTATTGGCAAGCGAGCCATGGCCGAGCGTCTGATGGCGCGCCTGTTGTGCCAGCAGCCGCAGGGCCTGGACGCTTGTGGGGCGTGTAAGTCGTGCCTGTTGCTCAAGGCCGGCAGCCACCCGGACAACTTCGTC   <  6:42032/149‑1                                                                                                                                                      CATGGGCCGCAGGGTATTGGCAAGCGAGCCATGGCCGAGCGTCTGATGGCGCGCCTGTTGTGCCAGCAGCCGCAGGGCCTGGACGCTTGTGGGGCGTGTAAGTCGTGCCTGTTGCTCAAGGCCGGCAGCCACCCGGACAACTTCGTCC  <  8:72828/148‑1                                                                                                                                                      CATGGGCCGCAGGGTATTGGCAAGCGAGCCATGGCCGAGCGTCTGATGGCGCGCCTGTTGTGCCAGCAGCCGCAGGGCCTGGACGCTTGTGGGGCGTGTAAGTCGTGCCTGTTGCTCAAGGCCGGCAGCCACCCGGACAACTTCGTC   <  4:366895/147‑1                                                                                                                                                                                                                                                                                                           CAAGCGTCCAGGCCCTGCGGCTGCTGGCACAACAGGCGCGCCATCAGACGCTCGGCCATGGCTCGCTTGCCAATACCCTGCGGCCCATGCAGCAGGTAAGCGTGGGCGTGGCGGCTGCGACCGGCCAGTTGCTGCCACAGCGCCTGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2228017‑2227868 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgctgcATGGGCCGCAGGGTATTGGCAAGCGAGCCATGGCCGAGCGTCTGATGGCGCGCCTGTTGTGCCAGCAGCCGCAGGGCCTGGACGCTTGTGGGGCGTGTAAGTCGTGCCTGTTGCTCAAGGCCGGCAGCCACCCGGACAACTTCGTCC  >  NC_002947/2227930‑2228076

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.