| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2475792 | 72 (1.130) | 4 (0.070) | 3/256 | NT | 5.3% | coding (577/1011 nt) | dusA | tRNA dihydrouridine synthase DusA |
| ? | NC_002947 | = 2475822 | 74 (1.210) | coding (547/1011 nt) | dusA | tRNA dihydrouridine synthase DusA | |||||
CCTCGCGCCCCAGCATCACGCCATCGAAGGTTTCAAGGTGTGCCTGGCATTCGTCCAGGGTCTTGATCCCGCCGTTGAGCACGATCTCCAGGTCCGGGAAGTCCCTCTTCAACTGCGCTGCGATGTCATAGCGCAGCGGCGGAATCTCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2475642‑2475792‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgATTCTGGAAGGGCTGTCGCCGAAAGAGAACCGCGAGATTCCGCCGCTGCGCTATGACATCGCAGCGCAGTTGAAGAGGGACTTCCCGGACCTGGAGATCGTGCTCAACGGCGGGATCAAGACCCTGGACGAATGCCAGGCACAC < NC_002947/2475822‑2475679 CCTCGCGCCCCAGCATCACGCCATCAAAGGTTTCAAGGTGTGCCTGGCATTCGTCCAGGGTCTTGATCCCGCCGTTGAGCACGATCTCCAGGTCCGGGAAGTCCCTCTTCAACTGCGCTGCGATGTCATAGCGCAGCGGCGGAATCTCG > 7:261622/1‑149 CTCGCGCCCCAGCATCACGCCATCGAAGGTTTCAAGGTGTGCCTGGCATTCGTCCAGGGTCTTGATCCCGCCGTTGAGCACGATCTCCAGGTCCGGGAAGTCCCTCTTCAACTGCGCTGCGATGTCATAGCGCAGCGGCGGAATCTCGC < 8:11835/149‑1 GTGTGCCTGGCATTCGTCCAGGGTCTTGATCCCGCCGTTGAGCACGATCTCCAGGTCCGGGAAGTCCCTCTTCAACTGCGCTGCGATGTCATAGCGCAGCGGCGGAATCTCGCGATTCTGGAAGGGCTGTCGCCGAAAGAGAACCGCGA < 1:57070/149‑1 GTGTGCCTGGCATTCGTCCAGGGTCTTGATCCCGCCGTTGAGCACGATCTCCAGGTCCGGGAAGTCCCTCTTCAACTGCGCTGCGATGTCATAGCGCAGCGGCGGAATCTCGCGATTCTGGAAGGGCTGTCGCCGAAAGAGAACCGCGA < 6:375095/149‑1 GCACGATCTCCAGGTCCGGGAAGTCCCTCTTCAACTGCGCTGCGATGTCATAGCGCAGCGGCGGAATCTCGCGATTCTGGAAGGGCTGTCGCCGAAAGAGAACCGCGAGATTC > 1:258192/1‑113 GCACGATCTCCAGGTCCGGGAAGTCCCTCTTCAACTGCGCTGCGATGTCATAGCGCAGCGGCGGAATCTCGCGATTCTGGAAGGGCTGTCGCCGAAAGAGAACCGCGAGATTC < 2:258192/113‑1 gcgTCGCGATTCTGGAAGGGCTGTCGCCGAAAGAGAACCGCGAGATTCCGCCGCTGCGCTATGACATCGCAGCGCAGTTGAAGAGGGACTTCCCGGACCTGGAGATCGTGCTCAACGGCGGGATCAAGACCCTGGACGAATGCCAGGCA > 7:50588/4‑149 TCGCGATTCTGGAAGGGCTGTCGCCGAAAGAGAACCGCGAGATTCCGCCGCTGCGCTATGACATCGCAGCGCAGTTGAAGAGGGACTTCCCGGACCTGGAGATCGTGCTCAACGGCGGGATCAAGACCCTGGACGAATGCCAGGCACAC > 2:204868/1‑149 GCGATTCTGGAAGGGCTGTCGCCGAAAGAGAACCGCGAGATTCCGCCGCTGCGCTATGACATCGCAGCGCAGTTGAAGAGGGACTTCCCGGACCTGGAGATCGTGCTCAACGGCGGGATCAAGACCCTGGACGAAT > 5:218550/1‑136 GCGATTCTGGAAGGGCTGTCGCCGAAAGAGAACCGCGAGATTCCGCCGCTGCGCTATGACATCGCAGCGCAGTTGAAGAGGGACTTCCCGGACCTGGAGATCGTGCTCAACGGCGGGATCAAGACCCTGGACGAAT < 6:218550/136‑1 CCTCGCGCCCCAGCATCACGCCATCGAAGGTTTCAAGGTGTGCCTGGCATTCGTCCAGGGTCTTGATCCCGCCGTTGAGCACGATCTCCAGGTCCGGGAAGTCCCTCTTCAACTGCGCTGCGATGTCATAGCGCAGCGGCGGAATCTCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2475642‑2475792‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgATTCTGGAAGGGCTGTCGCCGAAAGAGAACCGCGAGATTCCGCCGCTGCGCTATGACATCGCAGCGCAGTTGAAGAGGGACTTCCCGGACCTGGAGATCGTGCTCAACGGCGGGATCAAGACCCTGGACGAATGCCAGGCACAC < NC_002947/2475822‑2475679 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |