New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2562510	40 (0.630)	5 (0.080)	4/248	NT	10.6%	coding (248/1137 nt)	dauA	FAD‑dependent catabolic D‑arginine dehydrogenase
	?	NC_002947	= 2562545	47 (0.790)					coding (283/1137 nt)	dauA	FAD‑dependent catabolic D‑arginine dehydrogenase

CGTGAATCGCAGCCTGGCTACCATTCCACCGGGCGTTCGGCGGCCATGTTCATGGAGGCTTACGGCACCCCACAGATCCAGGCACTGACCCGCGCCAGCCGGGCCTTCTACGAAGCGCCACCGCAGGGCTTCTGCGAGCACCCGCTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2562362‑2562510 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgctgctCCAGGCTGGCCACATACAGACAGCCTCGCGGCTCCAGCAGCGGGTGCTCGCAGAAGCCCTGCGGTGGCGCTTCGTAGAAGGCCCGGCTGGCGCGGGTCAGTGCCTGGATCTGTGGGGTGCCGTAAGCCTCCATGAACATGGCCGC  <  NC_002947/2562545‑2562401                                                                                                                                                                                                                                                                                                        CGTGAATCGCAGCCTGGCTACCATTCCACCGGGCGTTCGGCGGCCATGTTCATGGAGGCTTACGGCACCCCACAGATCCAGGCACTGACCCGCGCCAGCCGGGCCTTCTACGAAGCGCCACCGCAGGGCTTCTGCGAGCACCCGCTGCT                                                                                                                                                   <  4:357081/149‑1                      CATTCCACCGGGCGTTCGGCGGCCATGTTCATGGAGGCTTACGGCACCCCACAGATCCAGGCACTGACCCGCGCCAGCCGGGCCTTCTACGAAGCGCCACCGCAGGGCTTCTGCGAGCAC                                                                                                                                                           >  8:334322/1‑120                      CATTCCACCGGGCGTTCGGCGGCCATGTTCATGGAGGCTTACGGCACCCCACAGATCCAGGCACTGACCCGCGCCAGCCGGGCCTTCTACGAAGCGCCACCGCAGCGCTTCTGCGAGCAC                                                                                                                                                           <  7:334322/120‑1                                   GTTCGGCGGCCATGTTCATGGAGGCTTACGGCACCCCACAGATCCAGGCACTGACCCGCGCCAGCCGGGCCTTCTACGAAGCGCCACCGCAGGGCTTCTGCGAGCACCCGCTGCTCCAGGCTGGCCACATACAGACAGCCTCGCGGCTC                                                                                                                 >  4:179183/1‑149                                            CCATGTTCATGGAGGCTTACGGCACCCCACAGATCCAGGCACTGACCCGCGCCAGCCGGGCCTTCTACGAAGCGCCACCGCAGGGCTTCTGCGAGCACCCGCTGCTCCAGGCTGGCCACATACAGACAGCCTCGCGGCTCCAGCAGCGG                                                                                                        <  3:369403/149‑1                                            CCATGTTCATGGAGGCTTACGGCACCCCACAGATCCAGGCACTGACCCGCGCCAGCCGGGCCTTCTACGAAGCGCCACCGCAGGGCTTCTGCGAGCACCCGCTGCTCCAGGCTGGCCACATACAGACAGCCTCGCGGCTCCAGCAGCGG                                                                                                        <  3:375382/149‑1                                             CATGTTCATGGAGGCTTACGGCACCCCACAGATCCAGGCACTGACCCGCGCCAGCCGGGCCTTCTACGAAGCGCCACCGCAGGGCTTCTGCGAGCACCCGCTGCTCCAGGCTGGCCACATACAGACAGCCTCGCGGCTCCAGCAGCGGG                                                                                                       <  3:179183/149‑1                                                   CATGGAGGCTTACGGCACCCCACCGATCCAGGCACTGACCCGCGCCAGCCGGGCCTTCTACGAAGCGCCACCGCAGGGCTTCTGCGAGCACCCGCTGCTCCAGGCTGGCCACATACAGACAGCCTCGCGGCTCCAGCAGCGGGTGCTC                                                                                                  <  6:72685/148‑1                                                                                                                                              CCGCTGCTCCAGGCTGGCCACATACAGACAGCCTCGCGGCTCCAGCAGCGGGTGCTCGCAGAAGCCCTGCGGTGGCGCTTCGTAGAAGGCCCGGCTGGCGCGGGTCAGTGCCTGGATCTGTGGGGTGCCGTAAGCCTCCATGAACATGG      >  1:142662/1‑149                                                                                                                                              CCGCTGCTCCAGGCTGGCCACATACAGACAGCCTCGCGGCTCCAGCAGCGGGTGCTCGCAGAAGCCCTGCGGTGGCGCTTCGTAGAAGGCCCGGCTGGCGCGGGTCAGTGCCTGGATCTGTGGGGTGCCGTAAGCCTCCATGAACATGG      >  8:170096/1‑149                                                                                                                                               CGCTGCTCCAGGCTGGCCACATACAGACAGCCTCGCGGCTCCAGCAGCGGGTGCTCGCAGAAGCCCTGCGGTGGCGCTTCGTAGAAGGCCCGGCTGGCGCGGGTCAGTGCCTGGATCTGTGG                                >  3:342595/1‑122                                                                                                                                               CGCTGCTCCAGGCTGGCCACATACAGACAGCCTCGCGGCTCCAGCAGCGGGTGCTCGCAGAAGCCCTGCGGTGGCGCTTCGTAGAAGGCCCGGCTGGCGCGGGTCAGTGCCTGGATCTGTGG                                <  4:342595/122‑1                                                                                                                                                GCTGCTCCAGGCTGGCCACATACAGACAGCCTCGCGGCTCCAGCAGCGGGTGCTCGCAGAAGCCCTGCGGTGGCGCTTCGTAGAAGGCCCGGCTGGCGCGGGTCAGTGCCTGGATCTGTGGGGTGCCGTAAGCCTCCATGAACATG       <  1:302449/146‑1                                                                                                                                                GCTGCTCCAGGCTGGCCACATACAGACAGCCTCGCGGCTCCAGCAGCGGGTGCTCGCAGAAGCCCTGCGGTGGCGCTTCGTAGAAGGCCCGGCTGGCGCGGGTCAGTGCCTGGATCTGTGGGGTGCCGTAAGCCTCCATGAACATG       >  2:302449/1‑146                                                                                                                                                    CTCCAGGCTGGCCACATACAGACAGCCTCGCGGCTCCAGCAGCGGGTGCTCGCAGAAGCCCTGCGGTGGCGCTTCGTAGAAGGCCCGGCTGGCGCGGGTCAGTGCCTGGATCTGTGGGGTGCCGTAAGCCTCCATGAACATGGCCGC  <  2:142662/147‑1                                                                                                                                                                                                                                                                                                        CGTGAATCGCAGCCTGGCTACCATTCCACCGGGCGTTCGGCGGCCATGTTCATGGAGGCTTACGGCACCCCACAGATCCAGGCACTGACCCGCGCCAGCCGGGCCTTCTACGAAGCGCCACCGCAGGGCTTCTGCGAGCACCCGCTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2562362‑2562510 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgctgctCCAGGCTGGCCACATACAGACAGCCTCGCGGCTCCAGCAGCGGGTGCTCGCAGAAGCCCTGCGGTGGCGCTTCGTAGAAGGCCCGGCTGGCGCGGGTCAGTGCCTGGATCTGTGGGGTGCCGTAAGCCTCCATGAACATGGCCGC  <  NC_002947/2562545‑2562401

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.