| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2623445 = | 62 (0.980) | 4 (0.070) | 4/250 | NT | 6.4% | coding (36/585 nt) | PP_2295 | antirestriction protein |
| ? | NC_002947 | 2623469 = | 59 (0.990) | coding (60/585 nt) | PP_2295 | antirestriction protein | |||||
ACTGCTCGGGCTTCTTACCGCTGCACGCTGGGCAGGTAACGGTGACGTTAGGGTATGGGCTGGTGCGCAGGACGTAGACCGCAATGGCCTGTTTCAGCTCGTCCGCGTCCGCGTAGTCCTCCAGGTCGAACCAACGGCCGTGCAGGTGGCCGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2623599‑2623445‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgttgGTTCGACCTGGAGGACTACGCGGACGCGGACGAGCTGAAACAGGCCATTGCGGTCTACGTCCTGCGCACCAGCCCATACCCTAACGTCACCGTTACCTGCCCAGCGTGCAGCGGTAAGAAGCCCGAGCAGTTCTTCTGCAG > NC_002947/2623469‑2623609 ACTGCTCGGGCTTCTTACCGCTGCACGCTGGGCAGGTAACGGTGACGTTAGGGTATGGGCTGGTGCGCAGGACGTAGACCGCAATGGCCTGTTTCAGCTCGTCCGCGTCCGCGTAGTCCTCTAGGTCGAACCAACGGCCGTGCAGGTGG < 3:190906/149‑1ACTGCTCGGGCTTCTTACCGCTGCACGCTGGGCAGGTAACGGTGACGTTAGGGTATGGGCTGGTGCGCAGGACGTAGACCGCAATGGCCTGTTTCAGCTCGTCCGCGTCCGCGTAGTCCTCCAGGTCGAACCAACGGCCGTGCAGGTG < 7:24396/148‑1 GCTCGGGCTTCTTACCGCTGCACGCTGGGCAGGTAACGGTGACGTTAGGGTATGGGCTGGTGCGCAGGACGTAGACCGCAATGGCCTGTTTCAGCTCGTCCGCGTCCGCGTAGTCCTCCAGGTCGAACCAACGGCCGTGCAGGTGGCCG > 8:306713/1‑149 GCTGGGCAGGTAACGGTGACGTTAGGGTATGGGCTGGTGCGCAGGACGTAGACCGCAATGGCCTGTTTCAGCTCGTCCGCGTCCGCGTAGTCCTCCAGGTCGAACCAACGGCCACCTGCACGGCCGTTGGTTCGACCTGGAGGACTACG < 5:279932/149‑1 TCCAGGTCGAACCAACGGCCGTGCAGGTGGCCGTTGGTTCGACCTGGAGGACTACGCGGACGCGGACGAGCTGAAACAGGCCATTGCGGTCTACGTCCTGCGCACCAGCCCATAC > 3:61470/1‑115 TCCAGGTCGAACCAACGGCCGTGCAGGTGGCCGTTGGTTCGACCTGGAGGACTACGCGGACGCGGACGAGCTGAAACAGGCCATTGCGGTCTACGTCCTGCGCACCAGCCCATAC < 4:61470/115‑1 CAACGGCCGTGCAGGTGGCCGTTGGTTCGACCTGGAGGACTACGCGGACGCGGACGAGCTGAAACAGGCCATTGCGGTCTACGTCCTGCGCACCCGCCCATACCCTAACGTCACCGTTACCTGCCCAGCGTGCAGCGGTAAGAAGCCCG > 2:86181/1‑149 cagGGCCGTTGGTTCGACCTGGAGGACTACGCGGACGCGGACGAGCTGAAACAGTCCATTGCGGTCTACGTCCTGCGCACCAGCCCATACCCTAACGTCACCGTTACCTGCCCAGCGTGCAGCGGTAAGAAGCCCGAGCAGTTCTTCT < 8:225399/145‑1 GGCCGTTGGTTCGACCTGGAGGACTACGCGGACGCGGACGAGCTGAAACAGGCCATTGCGGTCTACGTCCTGCGCACCAGCCCATACCCTAACGTCACCGTTACCTGCCCAGCGTGCAGCGGTAAGAAGCCCGAGCAGTTCTTCTGCAG > 4:19494/1‑149 ACTGCTCGGGCTTCTTACCGCTGCACGCTGGGCAGGTAACGGTGACGTTAGGGTATGGGCTGGTGCGCAGGACGTAGACCGCAATGGCCTGTTTCAGCTCGTCCGCGTCCGCGTAGTCCTCCAGGTCGAACCAACGGCCGTGCAGGTGGCCGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2623599‑2623445‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgttgGTTCGACCTGGAGGACTACGCGGACGCGGACGAGCTGAAACAGGCCATTGCGGTCTACGTCCTGCGCACCAGCCCATACCCTAACGTCACCGTTACCTGCCCAGCGTGCAGCGGTAAGAAGCCCGAGCAGTTCTTCTGCAG > NC_002947/2623469‑2623609 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |