New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3044538 = | 55 (0.870) | 5 (0.080) | 5/256 | NT | 7.9% | coding (80/969 nt) | pstC | phosphate ABC transporter permease |
? | NC_002947 | 3044574 = | 64 (1.050) | coding (116/969 nt) | pstC | phosphate ABC transporter permease |
GGTTAACGTCCCAGACGCTGCCGAACAACACGTCAAAACCGTGCTTTTCAATCCCAGGCAGTGCCTTGCGGCCGACTTCGTAGACCAGCGCGAAGACCAGCGCCAGCACCAGCACCACGCCAATGCGCGCAAGCGCACGGAAGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3044684‑3044538 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcTGGTGCTGGCGCTGGTCTTCGCGCTGGTCTACGAAGTCGGCCGCAAGGCACTGCCTGGGATTGAAAAGCACGGTTTTGACGTGTTGTTCGGCAGCGTCTGGGACGTTAACCAAGGCAAGTACGGTATTCTGCCAGCGATCTGGGGTA > NC_002947/3044574‑3044720 GGTTAACGTCCCAGACGCTGCCGAACAACACGTCAAAACCGTGCTTTTCAATCCCAGGCAGTGCCTTGCGGCCGACTTCGTAGACCAGCGCGAAGACCAGCGCCAGCACCAGCACCACGCCAATGCGCGCAAGCGCACGGAAGGTGC < 1:784/147‑1 CAGCGCCAGCACCAGCACCACGCCAATGCGCGCAAGCGCACGGAAGGTGCTGGTGCTGGCGCTGGTCTTCGCGCTGGTCTACGAAGTCGGCCGCAAGGCACTGCCTGGGATTGAAAAGCACGGTTTTGACGTGTTGTTCG > 7:171979/1‑140 CAGCGCCAGCACCAGCACCACGCCAATGCGCGCAAGCGCACGGAAGGTGCTGGTGCTGGCGCTGGTCTTCGCGCTGGTCTACGAAGTCGGCCGCAAGGCACTGCCTGGGATTGAAAAGCACGGTTTTGACGTGTTGTTCG < 8:171979/140‑1 ACCAGCACCACGCCAATGCGCGCAAGCGCACGGAAGGTGCTGGTGCTGGCGCTGGTCTTCGCGCTGGTCTACGAAGTCGGCCGCAAGGCACTGCCTGGGATTGAAAAGCACGGTTTTGACGTGTTGTTCGGCAGCGTCTGGGACGTTAA > 6:245149/1‑149 CAGCACCACGCCAATGCGCGCAAGCGCACGGAAGGTGCTGGTGCTGGCGCTGGTCTTCGCGCTGGTCTACGAAGTCGGCCGCAAGGCACTGCCTGGGATTGAAAAGCACGGTTTTGACGTGTTGTTCGGCAGCGTCTGGGACGTTAAC > 3:268095/1‑148 CGCGCAAGCGCACGGAAGGTGCTGGTGCTGGCGCTGGTCTTCGCGCTGGTCTACGAAGTCGGCCGCAAGGCACTGCCTGGGATTGAAAAGCACGGTTTTGACGTGTTGTTCGGCAGCGTCTGGGACGTTAACCAAGGCAAGTACGGTA < 5:245149/148‑1 gggGCTGGTGCTGGCGGTGGTCTTCGCGCTGGTCTACGCAGTCGGCCGCAAGGCACTGCCTGGGATGGAACAGCACGGGTTTGACGTGTTGTTCGGCAGCGTCTGGGACGTTAACCAAGGCAAGTACGGTATTCTGCCAGCGATCTGGG < 3:391767/146‑1 ggGCTGGTGCTGGCGCTGGTCTTCGCGCTGGTCTACGAAGTCGGCCGCAAGGCACTGCCTGGGATTGAAAAGCACGGTTTTGACGTGTTGTTCGGCAGCGTCTGGGACGTTAACCAAGGCAAGTACGGTATTCTGCCAGCGATCTGGGG < 7:342230/147‑1 GTGCTGGTGCTGGCGCTGGTCTTCGCGCTGGTCTACGAAGTCGGCCGCAAGGCACTGCCTGGGATTGAAAAGCACGGTTTTGACGTGTTGTTCGGCAGCGTCTGGGACGTTAACCAAGGCAAGTACGGTATTCTGCCAGCGATCTGGGG > 8:361735/1‑149 GTGCTGGTGCTGGCGCTGGTCTTCGCGCTGGTCTACGAAGTCGGCCGCAAGGCACTGCCTGGGATTGAAAAGCACGGTTTTGACGTGTTGTTCGGCAGCGTCTGGGACGTTAACCAAGGCAAGTACGGTATTCTGCCAGCGATCTGGG < 1:360633/148‑1 CTGGTGCTGGCGCTGGTCTTCGCGCTGGTCTACGAAGTCGGCCGCAAGGCACTGCCTGGGATTGAAAAGCACGGTTTTGACGTGTTGTTCGGCAGCGTCTGGGACGTTAACCAAGGCAAGTACGGTATTCTGCCAGCGATCTGGGGTA < 7:361735/148‑1 GGTTAACGTCCCAGACGCTGCCGAACAACACGTCAAAACCGTGCTTTTCAATCCCAGGCAGTGCCTTGCGGCCGACTTCGTAGACCAGCGCGAAGACCAGCGCCAGCACCAGCACCACGCCAATGCGCGCAAGCGCACGGAAGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3044684‑3044538 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcTGGTGCTGGCGCTGGTCTTCGCGCTGGTCTACGAAGTCGGCCGCAAGGCACTGCCTGGGATTGAAAAGCACGGTTTTGACGTGTTGTTCGGCAGCGTCTGGGACGTTAACCAAGGCAAGTACGGTATTCTGCCAGCGATCTGGGGTA > NC_002947/3044574‑3044720 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |