New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3321451 =	58 (0.910)	3 (0.050)	3/250	NT	5.8%	coding (389/942 nt)	PP_2921	hypothetical protein
	?	NC_002947	3321517 =	43 (0.720)					coding (455/942 nt)	PP_2921	hypothetical protein

CGGCAGGCCGGCGACAAAGCCGACCATCGATACGAACCATGGCGCGCCACTGTGGGCGGCGATGAAGGCCTCGACATCGGCCAGGCCGTTGATGCGCGCGGCGTACTCCAGGTCTGTGCTGGTCGGGTCCTGGTGGCGATCCCGAAAGCGCATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3321605‑3321451 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcatcaACGGCCTGGCCGATGTCGAGGCCTTCATCGCCGCCCACAGTGGCGCGCCATGGTTCGTATCGATGGTCGGCTTTGTCGCCGGCCTGCCGTTCATGTTCCAGATGGTCGAGCGCGAGCGGCAGCTGCAGGTGCCCAAGTACCTGCGCC  >  NC_002947/3321517‑3321663                                                                                                                                                                                                                                                                                                                CGGCAGGCCGGCGACAAAGCCGACCATCGATACGAACCATGGCGCGCCACTGTGGGCGGCGATGAAGGCCTCGACATCGGCCAGGCCGTTTATGCGCGCGGCGTACTCCAGGTCTTTGCTGGTCGTGTCCTGGTGGCGATCCCGAAAGC                                                                                                                                                           <  7:58673/149‑1    CAGGCCGGCGACAAAGCCGACCATCGATACGAACCATGGCGCGCCACTGTGGGCGGCGATGAAGGCCTCGACATCGGCCAGGCCGTTGATGCGCGCGGCGTACTCCAGGTCTGTGCTGGTCGGGTCCTGGTGGCGATCCCGAAAGCGCA                                                                                                                                                        >  3:223426/1‑149       GCCGGCGACAAAGCCGACCATCGATACGAACCATGGCGCGCCACTGTGGGCGGCGATGAAGGCCTCGACATCGGCCAGGCCGTTGATGCGCGCGGCGTACTCCAGGTCTGTGCTGGTCGGGTCCTGGTGGCGATCCCGAAAGCGCATCA                                                                                                                                                     <  7:22197/149‑1                                                             GATGAAGGCCTCGACATCGGCCAGGCCGTTGATGCGCGCGGCGTACTCCAGGTCTGTGCTGGTCGGGTCCTGGTGGCGATCCCGAAAGCGCAT                                                                                                                                                       >  1:207150/1‑93                                                             GATGAAGGCCTCGACATCGGCCAGGCCGTTGATGCGCGCGGCGTACTCCAGGTCTGTGCTGGTCGGGTCCTGGTGGCGATCCCGAAAGCGCAT                                                                                                                                                       <  2:207150/93‑1                                                                     CCTCGACATCGGCCAGGCCGTTGATGCGCGCGGCGTACTCCAGGTCTGTGCTGGTCGGGTCCTGGTGGCGATCCCGAAAGCGCATCAACGGCCTGGCCGATGTCGAGGCCTTCATCGCCGCCCACAGTGGCGCGCCATGGTTCGTATCG                                                                                       >  3:131059/1‑149                                                                                        GTTGATGCGCGCGGCGTACTCCAGGTCTGTGCTGGTCGGGTCCTGGTGGCGATCCCGAAAGCGCATCAACGGCCTGGCCGATGTCGAGGCCTTCATCGCCGCCCACAGTGGCGCGCCATGGTTCGTATCGATGGTCGGCTTTGTCGCCG                                                                    >  2:117287/1‑149                                                                                                GCGCGGCGTACTCCAGGTCTGTGCTGGTCGGGTCCTGGTGGCGATCCCGAAAGCGCATCAACGGCCTGGCCGATGTCGAGGCCTTCATCGCCGCCCACAGTGGCGCGCCATGGTTCGTATCGATGGTCGGCTTTGTCGCCGGCCTGCCG                                                            <  4:131059/149‑1                                                                                                                                                     CGCATCAACGGCCTGGCCGATGTCGAGGCCTTCATCGCCGCCCACAGTGGCGCGCCATGGTTCGTATCGATGGTCGGCTTTGTCGCCGGCCTGCCGTTCATGTTCCAGATGGTCGAGCGCGAGCGGCAGCTGCAGGTGCCCAAGTACCT       <  8:370922/149‑1                                                                                                                                                       CATCAACGGCCTGGCAGAGGTCGAGGCCTTCATCGCCGCCCACAGTGGCGCGCCATGGTTCGTATCGATGGTCGGCTTTGTCGCCGGCCTGCCGTTCATGTTCCAGATGGTCGAGCGCGAGCGGCAGCTGCAGGTGCCCAAGTACCTGC     <  8:301063/149‑1                                                                                                                                                        ATCAACGGCCTGGCCGATGTCGAGGCCTTCATCGCCGCCCACAGTGGCGCGCCGTGGTTAGTATCGATGGTCGGCTTTGTCGCCGGCCTGCCGTTCATGTTCCAGATGGTCGAGCGCGAGCGGCAGCTGCAGGTGGCCAAGTACCTTCG    >  1:102356/1‑149                                                                                                                                                         TCAACGGCCTGGCCGATGTCGAGGCCTTCATCGCCGCCCACAGTGGCGCGCCATGGTTCGTATCGAT‑GTCGGCTTTGTCGCCGGCCTGCCGTTCATGTTCCAGATGGTCGAGCGCGAGCGGCAGCTGCAGGTGCCCAAGTACCTGCGCC  >  2:6897/1‑149                                                                                                                                                          CAACGGCCTGGCCGATGTCGAGGCCTTCATCGCCGCCCACAGTGGCGCGCCATGGTTCGTATCGATGGTCGGCTTTGTCGCCGGCCTGCCGTTCATGTTCCAGATGGTCGAGCGCGAGCGGCAGCTGCAGGTGCCCAAGTACCTGCGCC  >  8:217154/1‑149                                                                                                                                                          CAACGGCCTGGCCGATGTCGAGGCCTTCATCGCCGCCCACAGTGGCGCGCCATGGTTCGTATCGATGGTCGGCTTTGTCGCCGGCCTGCCGTTCATGTTCCAGA                                               <  3:346549/104‑1                                                                                                                                                          CAACGGCCTGGCCGATGTCGAGGCCTTCATCGCCGCCCACAGTGGCGCGCCATGGTTCGTATCGATGGTCGGCTTTGTCGCCGGCCTGCCGTTCATGTTCCAGA                                               >  4:346549/1‑104                                                                                                                                                                                                                                                                                                                CGGCAGGCCGGCGACAAAGCCGACCATCGATACGAACCATGGCGCGCCACTGTGGGCGGCGATGAAGGCCTCGACATCGGCCAGGCCGTTGATGCGCGCGGCGTACTCCAGGTCTGTGCTGGTCGGGTCCTGGTGGCGATCCCGAAAGCGCATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3321605‑3321451 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcatcaACGGCCTGGCCGATGTCGAGGCCTTCATCGCCGCCCACAGTGGCGCGCCATGGTTCGTATCGATGGTCGGCTTTGTCGCCGGCCTGCCGTTCATGTTCCAGATGGTCGAGCGCGAGCGGCAGCTGCAGGTGCCCAAGTACCTGCGCC  >  NC_002947/3321517‑3321663

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.