| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3568534 | 66 (1.040) | 4 (0.070) | 4/256 | NT | 5.7% | coding (1091/1998 nt) | PP_3150 | hypothetical protein |
| ? | NC_002947 | = 3568560 | 70 (1.150) | coding (1117/1998 nt) | PP_3150 | hypothetical protein | |||||
CGTTCTGCCACAGTGCCGATACCCAGCTTCAGCTGCACCACTTGCCCTGGGCCGGGCCTGGCACCTCGCCGCTGGATCAGGAGGTGCTGCTGGAAAAGGCACGCCTGTACTGGCAAGAGCTGATTCGCCCGTCGGCGCGGGACATTCAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3568384‑3568534‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagctTGACCCGGTGGTAGTCACGCACCGGCAGCTGAATGTCCCGCGCCGACGGGCGAATCAGCTCTTGCCAGTACAGGCGTGCCTTTTCCAGCAGCACCTCCTGATCCAGCGGCGAGGTGCCAGGCCCGGCCCAGGGCAAGTGGTGCA < NC_002947/3568560‑3568417 CGTTCTGCCACAGTGCCGATACCCAGCTTCAGCTGCACCACTTGCCCTGGGCCGGGCCTGGCACCTCGCCGCTGGATCAGGAGGTGCTGCTGGAAAAGGCACGCCTGTACTGGCAAGAGCTGATTCGCCCGTCGGCGCGGGACATTCAG < 1:172075/149‑1 CACAGTGCCGATACCCAGCTTCAGCTGCACCACTTGCCCTGGGCCGGGCCTGGCACCTCGCCGCTGGATCAGGAGGTGCTGCTGGAAAAGGCACGCCTGTACTGGCAAGAGCTGATTCGCCCGTCGGCGCGGGACATTCA < 5:360066/140‑1 CACAGTGCCGATACCCAGCTTCAGCTGCACCACTTGCCCTGGGCCGGGCCTGGCACCTCGCCGCTGGATCAGGAGGTGCTGCTGGAAAAGGCACGCCTGTACTGGCAAGAGCTGATTCGCCCGTCGGCGCGGGACATTCA > 6:360066/1‑140 CCACTTGCCCTGGGCCGGGCCTGGCAGCTCGCCGCTGGATCAGGAGGTGCTGCTGGAAAACGCACGCCTGTACTGGCAAGAGCTGATTCGCCCGTCGGCGCGGAACATTCAGCTTGACCCGGTGGTAGTCACGCACCGGCAGCTGAATG < 6:14139/149‑1 CACTTGCCCTGGGCCGGGCCGGGCACCTCGCCGCTGGATCAGGAGGTGCTGCTGGAAAAGGCACGCCTGTACTGGCAAGAGCTGATTCGCCCGTCGGCGCGGGACATTCAGCTTGACCCGGTGGTAGTCACGCACCGGCAGCTGAATGT < 8:136920/149‑1 TCAGGAGGTGCTGCTGGAAAAGGCACGCCTGTACTGGCAAGAGCTGATTCGCCCGTCGGCGCGGGACATTCAGCTTGACCCGGTGGTAGTCACGCACCGGCAGCTGAATGTCCC > 5:78787/1‑114 TCAGGAGGTGCTGCTGGAAAAGGCACGCCTGTACTGGCAAGAGCTGATTCGCCCGTCGGCGCGGGACATTCAGCTTGACCCGGTGGTAGTCACGCACCGGCAGCTGAATGTCCC < 6:78787/114‑1 CAGCTTGACCCGGTGGTAGTCACGCACCGGCAGCTGAATGTCCCGCGCCGACGGGCGAATCAGCTCTTGCCAGTACAGGCGTGCCTTTTCCAGCAGCACCTCCTGATCCAGCGGCGAGGTGCCAGGCCCGGCCCAGGGCAAGTGGTGCA < 6:159308/149‑1 TTGACCCGGTGGTAGTCACGCACCGGCAGCTGAATGTCCCGCGCCGACGGGCGAATCAGCTCTTGCCAGTACAGGCGTGCCTTTTCCAGCAGCACCTCCTGATCCAGCGGCGAGGTGCCAGGCCCGGCCCA > 4:61719/1‑131 CGTTCTGCCACAGTGCCGATACCCAGCTTCAGCTGCACCACTTGCCCTGGGCCGGGCCTGGCACCTCGCCGCTGGATCAGGAGGTGCTGCTGGAAAAGGCACGCCTGTACTGGCAAGAGCTGATTCGCCCGTCGGCGCGGGACATTCAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3568384‑3568534‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagctTGACCCGGTGGTAGTCACGCACCGGCAGCTGAATGTCCCGCGCCGACGGGCGAATCAGCTCTTGCCAGTACAGGCGTGCCTTTTCCAGCAGCACCTCCTGATCCAGCGGCGAGGTGCCAGGCCCGGCCCAGGGCAAGTGGTGCA < NC_002947/3568560‑3568417 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |