| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3589655 = | 64 (1.010) | 5 (0.080) | 3/254 | NT | 7.7% | coding (176/1251 nt) | nicP‑I | porin‑like protein |
| ? | NC_002947 | 3589704 = | 58 (0.960) | coding (225/1251 nt) | nicP‑I | porin‑like protein | |||||
GCGCGGCCGTCGCCATGCACCGGCAACAGGCCGGTGTTGGTGCGGTCTGGACTGCTGTCCAGCTTGATGCCCAGCAAGCCCAGAGCGTCCACGCCAAAACCGACCGGGCCCGGGGTGTAGCCACTTTTGAAGTCGAGGATGAAACCCTGGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3589808‑3589655‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcccGGTCGGTTTTGGCGTGGACGCTCTGGGCTTGCTGGGCATCAAGCTGGACAGCAGTCCAGACCGCACCAACACCGGCCTGTTGCCGGTGCATGGCGACGGCCGCGCTGCCGACGAGTACAGCCGCCTGGCGCCGACCTTCAAGGCGCGG > NC_002947/3589704‑3589851 GCGCGGCCGTCGCCATGCACCGGCAACAGGCCGGTGTTGGTGCGGTCTGGACTGCTGTCCAGCTTGATGCCCAGCAAGCCCAGAGCGTCCACGCCAAAACCGACCGGGCCCGGGGTGTAGCCACTTTTGAAGTCGAGGATGAAACCCTG > 7:20536/1‑149 CGCGGCCGTCGCCATGCACCGGCAACAGGCCGGTGTTGGTGCGGTCTGGACTGCTGTCCAGCTTGATGCCCAGCAAGCCCAGAGCGTCCACGCCAAAACCGACCGGGCCCGGGGTGTAGCCACTTTTGAAGTCGAGGATGAAACCCTGG < 8:5057/149‑1 ggctggCGCCATGCACCGGCAACAGGCCGGTGTTGGTGCGGTCTGGACTACTGTCCAGCTTGATGCCCAGCAAGCCCAGAGCGTCCACGCCAAAACCGACCGGGCCCGGGGTGTAGCCACTTTTGAAGTCGAGGATGAAACCCTGGGCC < 4:67007/143‑1 CCGGGCCCGGGGTGTAGCCACTTTTGAAGTCGAGGATGAAACCCTGGGCCCGGTCGGTTTTGGCGTGGACGCTCTGGGCTTGCTGGGCATCAAGCTGGACAGCA > 1:131340/1‑104 CCGGGCCCGGGGTGTAGCCACTTTTGAAGTCGAGGATGAAACCCTGGGCCCGGTCGGTTTTGGCGTGGACGCTCTGGGCTTGCTGGGCATCAAGCTGGACAGCA < 2:131340/104‑1 GGCCCGGGGTGTAGCCACTTTTGAAGTCGAGGATGAAACCCTGGGCCCGGTCGGTTTTGGCGTGGACGCTCTGGGCTTGCTGGGCATCAAGCTGGACAGCAGTCCAGACCGCACCAACACCGGCCTGTTGCCGGTGCATGGCGACGGCC > 2:287597/1‑149 GGCCCGGGGTGTAGCCACTTTTGAAGTCGAGGATGAAACCCTGGGCCCGGTCGGTTTTGGCGTGGACGCTCTGGGCTTGCTGGGCATCAAGCTGGACAGCAGTCCAGACCGCACCAACACCGGCCTGTTGCCGGTGCATGGCGACGGCC > 4:48016/1‑149 GGCCCGGGGTGTAGCCACTTTTGAAGTCGAGGATGAAACCCTGGGCCCGGTCGGTTTTGGCGTGGACGCTCTGGGCTTGCTGGGCATCAAGCTGGACAGCAGTCCAGACCGCACCAACACCGGCCTGTTGCCGGTGCATGGCGACGGCC > 4:53228/1‑149 CCCGGTCGGTTTTGGCGTGGACGCTCTGGGCTTGCTGGGCATCAAGCTGGACAGCAGTCCAGACCGCACCAACACCGGCCTGTTGCCGGTGCATGGCGACGGCCGCGCTGCCGACGAGTAC < 5:14947/121‑1 CCCGGTCGGTTTTGGCGTGGACGCTCTGGGCTTGCTGGGCATCAAGCTGGACAGCAGTCCAGACCGCACCAACACCGGCCTGTTGCCGGTGCATGGCGACGGCCGCGCTGCCGACGAGTAC > 6:14947/1‑121 CCGGTCGGTTTTGGCGTGGACGCTCTGGGCTTGCTGGGCATCAAGCTGGACAGCAGTCCAGACCGCACCAACACCGGCCTGTTGCCGGTGCATGGCGACGGCCGCGCTGCCGACGAGTACAGCCGCCTGGCGCCGACCTTCAAGGCGCG < 2:234680/149‑1 CGGTCGGTTTTGGCGTGGACGCTCTGGGCTTGCTGGGCATCAAGCTGGACAGCAGTCCAGACCGCACCAACACCGGCCTGTTGCCGGAGCATGGCGACGGCCGCGCTGCCGACGAGTACAGCCGCCTGGCGCCGACCTTCAAGGCGCGG > 2:359334/1‑149 GCGCGGCCGTCGCCATGCACCGGCAACAGGCCGGTGTTGGTGCGGTCTGGACTGCTGTCCAGCTTGATGCCCAGCAAGCCCAGAGCGTCCACGCCAAAACCGACCGGGCCCGGGGTGTAGCCACTTTTGAAGTCGAGGATGAAACCCTGGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3589808‑3589655‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcccGGTCGGTTTTGGCGTGGACGCTCTGGGCTTGCTGGGCATCAAGCTGGACAGCAGTCCAGACCGCACCAACACCGGCCTGTTGCCGGTGCATGGCGACGGCCGCGCTGCCGACGAGTACAGCCGCCTGGCGCCGACCTTCAAGGCGCGG > NC_002947/3589704‑3589851 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |