| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3596640 = | 61 (0.960) | 3 (0.050) | 3/254 | NT | 5.1% | coding (366/1098 nt) | nemA | FMN‑linked N‑ethylmaleimide reductase |
| ? | NC_002947 | 3596740 = | 54 (0.890) | coding (266/1098 nt) | nemA | FMN‑linked N‑ethylmaleimide reductase | |||||
ATTCACAGCGCCGAACAGATCGCTGCCTGGAAGCACATCAACGAAGGCATCCATGCCGAGGGCGGCCACAGCGCCGTGCAGGTGTGGCACACCGGGCGTGTGTCGCATACCTCCCTGCAACCTGGCGGCAAGGCACCCGTGGCCCCTTCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3596792‑3596640‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcaTGGATGCCTTCGTTGATGTGCTTCCAGGCAGCGATCTGTTCGGCGCTGTGAATGCCGGGCGAGCCCGAATAGCCCTTGGCCTGGAAGGAGATTTGTGTGGCTTCAGTGATGATCAGGCCAGCACTGGCACGCTGACGGTAGTACTCGG > NC_002947/3596740‑3596887 ATTCACAGCGCCGAACAGATCGCTGCCTGGAAGCACATCAACGAAGGCATCCATGCCGAGGGCGGCCACAGCGCCGTGCAGGTGTGGCACACCGGGCGTGTGTCGCATACCTCCCTGCAACCTGGCGGCAAGGCACCCGTGGCCCCTTC < 7:80984/149‑1 CACAGCGCCGAACAGATCGCTGCCTGGAAGCACATCAACGAAGGCATCCATGCCGAGGGCGGCCACAGCGCCGTGCAGGTGTGGCACACCGGGCGTGTGTCGCATACCTCCCTGCAACCTGGCGGCAAGGCACCCGTGGCCCCTTCGG < 7:15314/148‑1 ACAGCGCCGAACAGATCGCTGCCTGGAAGCACATCAACGAAGGCATCCATGCCGAGGGCGGCCACAGCGCCGTGCAGGTGTGGCACACCGGGCGTGTGTCGCATACCTCCCTGCAACCTGGCGGCAAGGCACCCGTGGCCCCTTCGGCA > 6:264987/1‑149 GCCGAGGGCGGCCACAGCGCCGTGAAGGTGTGGCACACCGGGCGTGTGTCGCATACCTCCCTGCAACCTGGCGGCAAGGCACCCGTGGCCCCTTCGGCATGGATGCCTTCGTTGATGTGCTTCCAGGCAGCGATCTGTTCGGCGCTGT > 5:356617/1‑148 CGAGGGCGGCCACAGCGCCGTGCAGGTGTGGCACACCGGGCGTGTGTCGCATACCTCCCTGCAACCTGGCGGCAAGGCACCCGTGGCCCCTTCGGCATGGATGCCTTCGTTGATGTGCTTCCAGGCAGCGATCTGTTCGGCGCTGTGAA > 3:356021/1‑149 CATACCTCCCTGCAACCTGGCGGCAAGGCACCCGTGGCCCCTTCGGCATGGATGCCTTCGTTGATGTGCTTCCAGGCAGCGATCTGTTCGGCGCTGTGAATGCCGGGCGAGCCCGAATAGCCCTTTGCCTGGAAGGAGATTTGTGTGGC < 6:356617/149‑1 TCGGCATGGATGCCTTCGTTGATGTGCTTCCAGGCAGCGATCTGTTCGGCGCTTTGAATGCCGGGCGAGCCCGAATAGCCCTTGGCCTGGAAGGAGATTTGTGT < 8:174711/104‑1 CATGGATGCCTTCGTTGATGTGCTTCCAGGCAGCGATCTGTTCGGCGCTGTGAATGCCGGGCGAGCCCGAATAGCCCTTGGCCTGGAAGGAGATTTGTGTGGCTTCAGTGATGATCAGGCCAGCACTGGCACGCTGACGGTAGTACTCG < 4:356021/149‑1 CATGGATGCCTTCGTTGATGTGCTTCCAGGCAGCGATCTGTTCGGCGCTGTGAATGCCGGGCGAGCCCGAATAGCCCTTGGCCTGGAAGGAGATTTGTGTGGCTTCAGTGATGATCAGGCCAGCACTGGCACGCTGACGGTAGTACTCG < 6:142274/149‑1 ATGGATGCCTTCGTTGATGTGCTTCCAGGCAGCGATCTGTTCGGCGCTGTGAATGCCGGGCGAGCCCGAATAGCCCTTGGCCTGGAAGGAGATTTGTGTGGCTTCAGTGATGATCAGGCCAGCACTGGCACGCTGACGGTAGTACTCGG < 2:98965/149‑1 ATTCACAGCGCCGAACAGATCGCTGCCTGGAAGCACATCAACGAAGGCATCCATGCCGAGGGCGGCCACAGCGCCGTGCAGGTGTGGCACACCGGGCGTGTGTCGCATACCTCCCTGCAACCTGGCGGCAAGGCACCCGTGGCCCCTTCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3596792‑3596640‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcaTGGATGCCTTCGTTGATGTGCTTCCAGGCAGCGATCTGTTCGGCGCTGTGAATGCCGGGCGAGCCCGAATAGCCCTTGGCCTGGAAGGAGATTTGTGTGGCTTCAGTGATGATCAGGCCAGCACTGGCACGCTGACGGTAGTACTCGG > NC_002947/3596740‑3596887 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |