| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3855026 | 59 (0.930) | 5 (0.080) | 5/254 | NT | 7.4% | coding (177/888 nt) | PP_3403 | quercetin 2,3‑dioxygenase |
| ? | NC_002947 | = 3855078 | 68 (1.120) | coding (125/888 nt) | PP_3403 | quercetin 2,3‑dioxygenase | |||||
GAATGAAACTCCTCATGAATGATGCCGTTGGCCGCCGTCATCCACTGCACGTCACCTGGACCGATCAACCCGCCAGCACCGGTGGAATCACGGTGCTCCAGTTCACCTTGGTAGACGATGGTCACGGTCTCGAAGCCGCGATGCGGATGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3854874‑3855026‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctggACTACGCCGGTCCGCATGATTTCACCCCGACCCGAGCACGACGCGGCGTAGGCCAGCATCCGCATCGCGGCTTCGAGACCGTGACCATCGTCTACCAAGGTGAACTGGAGCACCGTGATTCCACCGGTGCTGGCGGGTTGATCGGT < NC_002947/3855078‑3854933 GAATGAAACTCCTCATGAATGATGCCGTTGGCCGCCGTCATCCACTGCACGTCACCTGGACCGATCAACCCGCCAGCACCGGTGGAATCACGGTGCTCCAGTTCACCTTGGTAGACGATGGTCACGGTCTCGAAGCCGCGATGCGGATG < 2:93681/149‑1GAATGAAACTCCTCATGAATGATGCCGTTGGCCGCCGTCATCCACTGCACGTCACCTGGACCGATCAACCCGCCAGCACCGGTGGAATCACGGTGCTCCAGTTCACCTTGGTAGACGATGGTCACGGTCTCGAAGCCGCGATGCGGATG < 8:246220/149‑1 ATCCACTGCACGTCACCTGGACCGATCAACCCGCCAGCACCGGTGGAATCACGGTGCTCCAGTTCACCTTGGTAGACGATGGTCACGGTCTCGAAGCCGCGATGCGGATGCTGGACTACGCCGGTCCGCATGATTTCACCCCGACCCGA > 2:167474/1‑149 ACCTGGACCGATCAACCCGCCAGCACCGGTGGAATCACGGTGCTCCAGTTCACCTTGGTAGACGATGGTCACGGTCTCGAAGCCGCGATGCGGATGCTGGCCTACGCCGGTCCGCATGATTTCACCCCGACCCGAGCACGACGCGGCGT < 8:118453/149‑1 GACCGATCAACCCGCCAGCACCGGTGGAATCACGGTGCTCCAGTTCACCTTGGTAGACGATGGTCACGGTCTCGAAGCCGCGATGCGGATGCTGGACTACGCCGGTCCGCATGATTTCACCCCGACCCGAGCACGACGCGGCGTAGGC < 1:167474/148‑1 ATCAACCCGCCAGCACCGGGGGAATCACGGTGCTCCAGTTCACCTTGGTAGACGATGGTCACGGTCTCGAAGCCGCGATGCGGATGCTGGACTACGCCGGTCCGCATGATTTCACCCCGACCCGAGCACGACGCGGCGTAGGCCAGCAT < 7:313352/149‑1 TCAACCCGCCAGCACCGGTGGAATCACGGTGCTCCAGTTCACCTTGGTAGACGATGGTCACGGTCTCGAAGCCGCGATGCGGATGCTGGACTACGCCGGTCCGCATGATTTCACCCCGACCCGAGCACGACGCGGCGTAGGCCAGCATC < 3:148841/149‑1 TGCTGGACTACGCCGGTCCGCATGATTTCACCCCGACCCGAGCACGACGCGGCGTAGGCCAGCATCCGCATCGCGGCTTCGAGACCGTGACCATCGTCTACCAAGGTGAACTGGAGCACCGTGATTCCACCGGTGCTGGCGGGTTGATC > 3:160123/1‑149 TGGACTACGCCGGTCCGCATGATTTCACCCCGACCCGAGCACGACGCGGCGTAGGCCAGCATCCGCATCGCGGCTTCGAGACCGTGACCATCGTCTACCAAGGTGAACTGGAGCACCGTGATTCCACCGGTGCTGGCGGGTTGATCGGT > 4:276663/1‑149 GACTACGCCGGTCCGCATGATTTCACCCCGACCCGAGCACGACGCGGCGTAGGCCAGCATCCGCATCGCGGCTTCGAGACCGTGACCATCGTCTACCAAGGTGAACTGGAGCACCGTGATTCCACCGGTGCTGGCGGGTTGATCGGT < 4:175194/147‑1 GACTACGCCGGTCCGCATGATTTCACCCCGACCCGAGCACGACGCGGCGTAGGCCAGCATCCGCATCGCGGCTTCGAGACCGTGACCATCGTCTACCAAGGTGAACTGGAGCACCGTGATTCCACCGGTGCTGGCGGGTTGATCGGT < 7:198799/147‑1 GAATGAAACTCCTCATGAATGATGCCGTTGGCCGCCGTCATCCACTGCACGTCACCTGGACCGATCAACCCGCCAGCACCGGTGGAATCACGGTGCTCCAGTTCACCTTGGTAGACGATGGTCACGGTCTCGAAGCCGCGATGCGGATGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3854874‑3855026‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctggACTACGCCGGTCCGCATGATTTCACCCCGACCCGAGCACGACGCGGCGTAGGCCAGCATCCGCATCGCGGCTTCGAGACCGTGACCATCGTCTACCAAGGTGAACTGGAGCACCGTGATTCCACCGGTGCTGGCGGGTTGATCGGT < NC_002947/3855078‑3854933 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |