| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3991459 = | 76 (1.200) | 4 (0.070) | 4/248 | NT | 5.6% | coding (168/894 nt) | PP_3517 | hypothetical protein |
| ? | NC_002947 | 3991561 = | 64 (1.080) | coding (66/894 nt) | PP_3517 | hypothetical protein | |||||
CACTCGCTGCATTGCTGCTGACGGCAGGTCTGGCCTGGTCGTTCGTGGCCGCTGCCCAGCAAGCCTTCCCAACGCCGGAGAAGGCCGTGGAAGCCTTTGTCGCGGCGCTGGGCCAGGAAAAACCTGATGAAGCCCGCCTGGCCCAGTTGCTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3991613‑3991459‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgctgggcAGCGGCCACGAACGACCAGGCCAGACCTGCCGTCAGCAGCAATGCAGCGAGTGTTGGGCGCTTCATCGACGGCCTCCTGCGCCGCGACGCGCGGGCGCACTGGGCCGGGAGATCGGGTGCCCGGCGGCACGCGACGCACCG > NC_002947/3991561‑3991701 CACTCGCTGCATTGCTGCTGACGGCAGGTCTGGCCTGGTCGTTCGTGGCCGCTGCCCAGCAAGCCTTCCCAACGCCGGAGAAGGCCGTGGAAGCCTTTGTCGCGGCGCTGGGCCAGGAAAAACCTGATGAAGCCCGCCTGGCCCAGTTG < 1:109635/149‑1CACTCGCTGCATTGCTGCTGACGGCAGGTCTGGCCTGGTCGTTCGTGGCCGCTGCCCAGCAAGCCTTCCCAACGCCGGAGAAGGCCGTGGAAGCCTTTGTCGCGGCGCTGGGCCAGGAAAAACCTGATGAAGCCCGCCTGGCCCAGTTG < 1:114688/149‑1 ACTCGCTGCATTGCTGCTGACGGCAGGTCTGGCCTGGTCGTTCGTGGCCGCTGCCCAGCAAGCCTTCCCAACGCCGGAGAAGGCCGTGGAAGCCTTTGTCGCGGCGCTGGGCCAGGAAAAACCTGATGAAGCCCGCCTGGCCCAGTTGC > 3:233332/1‑149 CTCGCTGCATTGCTGCTGACGGCAGGTCTGGCCTGGTCGTTCGTGGCCGCTGCCCAGCAAGCCTTCCCAACGCCGGAGAAGGCCGTGGAAGCCTTTGTCGCGGCGCTGGGCCAGGAAAAACCTGATGAAGCCCGCCTGGCCCAGTTGCT > 1:108956/1‑149 GCTGCATTGCTGCTGACGGCAGGTCTGGCCTGGTCGTTCGTGGCCGCTGCCCAGCAAGCCTTCCCAACGCCGGAGAAGGCCGTGGAAGCCTTTGTCGCGGCGCTGGGCCAGGAAAAACCTGATGAAGCCCGCCTGGCCCAGTTGCTGGG > 3:136804/1‑149 GCTGCATTGCTGCTGACGGCAGGTCTGGCCTGGTCGTTCGTGGCCGCTGCCCAGCAAGCCTTCCCAACGCCGGAGAAGGCCGTGGAAGCCTTTGTCGCGGCGCTGGGCCAGGAAAAACCTGATGAAGCCCGCCTGGCCCAGTTGCTGGG > 8:185899/1‑149 CCAGCAAGCCTTCCCAACGCCGGAGAAGGCCGTGGAAGCCTTTGTCGCGGCGCTGGGCCAGGAAAAACCTGATGAAGCCCGCCTGGCCCAGTTGCTGGGCAGCGGCCACGAACGACCAGGCCAGACCTGCCGTCAGCAGCAATGCAGC > 7:317569/1‑148 CAGCAAGCCTTCCCAACGCCGGAGAAGGCCGTGGAAGCCTTTGTCGCGGCGCTGGGCCAGGAAAAACCTGATGAAGCCCGCCTGGCCCAGTTGCTGGGCAGCGGCCACGAACGACCAGGCCAGACCTGCCGTCAGCAGCAATGCAGC > 6:9819/1‑147 AGCCTTCCCAACGCCGGAGAAGGCCGTGGAAGCCTTTGTCGCGGCGCTGGGCCAGGAAAAACCTGATGAAGCCCGCCTGGCCCAGTTGCTGGGCAGCGGCCACGAACGACCAGGCCAGACCTGCCGTCAGCAGCAATGCAGCGAGTGTT < 5:9819/149‑1 ATGAAGCCCGCCTGGCCCAGTTGCTGGGCAGCGGCCACGAACGACCAGGCCAGACCTGCCGTCAGCAGCAATGCAGCGAGTGTTGGGCGCTTCATCGACGGCCTCCTGCGCCGCGACGCGCGGGCGCACTGGGCCGGGAGATCGGGT < 8:317569/147‑1 TTGCTGGGCAGCGGCCACGAACGACCAGGCCAGACCTGCCGTCAGCAGCAATGCAGCGAGTGTTGGGCGCTTCATCGACGGCCTCCTGCGCCGCGACGCGCGGGCGCACTGGGCCGGGAGATCGGGTGCCCGGCGGCACGCGACGCACC > 3:221123/1‑149 GCTGGGCAGCGGCCACGAACGACCAGGCCAGACCTGCCGTCAGCAGCAATGCAGCGAGTGTTGGGCGCTTCATCGACGGCCTCCTGCGCCGCGACGCGCGGGCGCACTGGGCCGGGAGATCGGGTGCCCGGCGGCACGCGACGCACCG < 1:346834/148‑1 CACTCGCTGCATTGCTGCTGACGGCAGGTCTGGCCTGGTCGTTCGTGGCCGCTGCCCAGCAAGCCTTCCCAACGCCGGAGAAGGCCGTGGAAGCCTTTGTCGCGGCGCTGGGCCAGGAAAAACCTGATGAAGCCCGCCTGGCCCAGTTGCTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3991613‑3991459‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgctgggcAGCGGCCACGAACGACCAGGCCAGACCTGCCGTCAGCAGCAATGCAGCGAGTGTTGGGCGCTTCATCGACGGCCTCCTGCGCCGCGACGCGCGGGCGCACTGGGCCGGGAGATCGGGTGCCCGGCGGCACGCGACGCACCG > NC_002947/3991561‑3991701 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |