New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4098066 =	55 (0.870)	3 (0.050)	3/248	NT	5.5%	coding (624/975 nt)	qor‑II	quinone oxidoreductase
	?	NC_002947	4098108 =	51 (0.860)					coding (582/975 nt)	qor‑II	quinone oxidoreductase

CTTGGGCGCGACACCTGGGGGCGACGGTGATAGGGGTGGTATCGCGCCTGCAAAGTGTGGAGCGGGCACGGGCGGCGGGTTGCCAGCATGTGCTGGTGTTCGACGCAAAAACCTTGGCCAGCCAGGTGCGTGAGCTGACCCAAGGCCAAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4098217‑4098066 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaaggtTTTTGCGTCGAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACC  >  NC_002947/4098108‑4098251                                                                                                                                                                                                                                                                                                          CTTGGGCGCGACACCTGGGGGCGACGGTGATAGGGGTGGTATCGCGCCTGCAAAGTGTGGAGCGGGCACGGGCGGCGGGTTGCCAGCATGTGCTGGTGTTCGACGCAAAAACCTTGGCCAGCCAGGTGCGTGAGCTGACCAAAGGCC                                                                                                                                                       >  7:118675/1‑147    GGGCGCGACACCTGGGGGCGACGGTGATAGGGGTGGTATCGCGCCTGCAAAGTGTGGAGCGGGCACGGGCGGCGGGTTGCCAGCATGTGCTGGTGTTCGACGCAAAAACCTTGGCCAGCCAGGTGCGTGAGCTGACCCAAGGCCAAG                                                                                                                                                    <  6:350939/147‑1                                                                                                             AAACCTTGGCCAGCCAGGTGCGTGAGCTGACCCAAGGCCAAGGTTTTTGCGTCGAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGC                                         >  6:375818/1‑149                                                                                                                 CTTGGCCAGCCAGGTGCGTGAGCTGACCCAAGGCCAAGGTTTTTGCGTCGAACACCAGCACATGCTGGCAACCCGCCG                                                                                                            <  3:83307/78‑1                                                                                                                 CTTGGCCAGCCAGGTGCGTGAGCTGACCCAAGGCCAAGGTTTTTGCGTCGAACACCAGCACATGCTGGCAACCCGCCG                                                                                                            >  4:83307/1‑78                                                                                                                                                  CCAAGGTTTTTGCGTCGAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCA    >  5:292800/1‑149                                                                                                                                                   CAAGGTTTTTGCGTCGAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCAC   >  3:59059/1‑149                                                                                                                                                   CAAGGTTTTTGCGTCGAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCAC   >  3:90881/1‑149                                                                                                                                                   CAAGGTTTTTGCGTCGAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCAC   >  5:239032/1‑149                                                                                                                                                    AAGGTTTTTGCGTCGAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACC  <  8:33333/149‑1                                                                                                                                                                                                                                                                                                          CTTGGGCGCGACACCTGGGGGCGACGGTGATAGGGGTGGTATCGCGCCTGCAAAGTGTGGAGCGGGCACGGGCGGCGGGTTGCCAGCATGTGCTGGTGTTCGACGCAAAAACCTTGGCCAGCCAGGTGCGTGAGCTGACCCAAGGCCAAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4098217‑4098066 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaaggtTTTTGCGTCGAACACCAGCACATGCTGGCAACCCGCCGCCCGTGCCCGCTCCACACTTTGCAGGCGCGATACCACCCCTATCACCGTCGCCCCCAGGTGTCGCGCCCAAGGCACCATCAGCTGGCCCAAAGCACCGGCCGCACC  >  NC_002947/4098108‑4098251

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.