New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4757333 = | 61 (0.960) | 4 (0.070) | 3/252 | NT | 6.3% | coding (606/1413 nt) | ompQ | outer membrane pyoverdine efflux protein |
? | NC_002947 | 4757379 = | 62 (1.030) | coding (652/1413 nt) | ompQ | outer membrane pyoverdine efflux protein |
CAGTAGCGTTGCCAGGGTGACCTGGGTGTCTTGCCACTGCTGCTCAAGTAGCGGCAGTTGGCGTTGCTGAGCGGCCACCAGGCTGCGCTGCTGGGCCAGCTCGAGTTGGGTGCTGGAGCCGGACTGCTGGCGGGCTTCGACCAGGCTCAGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4757486‑4757333 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcaccCAACTCGAGCTGGCCCAGCAGCGCAGCCTGGTGGCCGCTCAGCAACGCCAACTGCCGCTACTTGAGCAGCAGTGGCAAGACACCCAGGTCACCCTGGCAACGCTACTGGGGCTACCGGTGCAACAACTGCCGACCAGTACCGCAGCAT > NC_002947/4757379‑4757526 CAGTAGCGTTGCCAGGGTGACCTGGGTGTCTTGCCACTGCTGCTCAAGTAGCGGCAGTTGGCGTTGCTGAGCGGCCACCAGGCTGCGCTGCTGGGCCAGCTCGAGTTGGGTGCTGGAGCCGGACTGCTGGCGGGCTTCGACCAGGCTCA < 7:25526/149‑1 GCGTTGCCAGGGTGACCTGGGTGTCTTGCCACTGCTGCTCAAGTAGCGGCAGTTGGCGTTGCTGAGCGGCCACCAGGCTGCGCTGCTGGGCCAGCTCGAGTTGGGTGCTGGAGCCGGACTGCTGGCGGGCTTCGACCAGGCTCAGCA < 3:110980/147‑1 TTGCCACTGCTGCTCAAGTAGCGGCAGTTGGCGTTGCTGAGCGGCCACCAGGCTGCGCTGCTGGGCCAGCTCGAGTTGGGTGCTGGAGCCGGACTGCTGGCGGGCTTCGACCAGGCTCAGCAC > 1:118447/1‑123 TTGCCACTGCTGCTCAAGTAGCGGCAGTTGGCGTTGCTGAGCGGCCACCAGGCTGCGCTGCTGGGCCAGCTCGAGTTGGGTGCTGGAGCCGGACTGCTGGCGGGCTTCGACCAGGCTCAGCAC < 2:118447/123‑1 TGCCACTGCTGCTCAAGTAGCGGCAGTTGGCGTTGCTGAGCGGCCACCAGGCTGCGCTGCTGGGCCAGCTCGAGTTGGGTGCTGGAGCCGGACTGCTGGCGGGCTTCGACCAGGCTCA < 3:198792/118‑1 TGCCACTGCTGCTCAAGTAGCGGCAGTTGGCGTTGCTGAGCGGCCACCAGGCTGCGCTGCTGGGCCAGCTCGAGTTGGGTGCTGGAGCCGGACTGCTGGCGGGCTTCGACCAGGCTCA > 4:198792/1‑118 GGTGCTGGAGCCGGACTGCTGGCTGGCTTCGACCAGGCTCAGCACCCAACTCGAGCTGGCACAGCAGCGCAGCCTGGTGGCCGCTCAGCAACGCCAACTGCCGCTACTTGAGCAGCAGTGTCAAGACACCCAGGTCACCCTGGCAACGC > 2:186606/1‑149 TGCTGGAGCCGGACTGCTGGCGGGCTTCGACCAGGCTCAGCACCCAACTTGAGCTGGCCCAGCAGCGCAGCCTGGTGGCCGCTCAGCAACGCCAACTGCCGCTACTTGAGCAGCAGTGGCAAGACACCCAGGTCACCCTGGCAACGC < 5:38822/147‑1 TGCTGGAGCCGGACTGCTGGCGGGCTTCGACCAGGCTCAGCACCCAACTTGAGCTGGCCCAGCAGCGCAGCCTGGTGGCCGCTCAGCAACGCCAACTGCCGCTACTTGAGCAGCAGTGGCAAGACACCCAGGTCACCCTGGAAACGC > 6:38822/1‑147 TGCTGGAGCCGGACTGCTGGCGGGCTTCGACCAGGCTCAGCACCCAACTCGAGCTGGCCCAGCAGCGCAGCCTGGTGGCCGCTCAGCAACGCCAACTGCCGCTACTTGAGCAGCAGTGGCAAGACACCCAGGTCACCCTGGCAACGCTA > 1:392192/1‑149 CAGCACCCAACTCGAGCTGGCCCAGCAGCGCAGCCTGGTGGCCGCTCAGCAACGCCAACTGCCGCTACTTGAGCAGCAGTGGCAAGACACCCAGGTCACCCTGGCAACGCTACTGGGGCTACCGGTGCAACAACTGCCGACCAGTACCG < 5:165584/149‑1 GCACCCAACTCGAGCTGGCCCAGCAGCGCAGCCTGGTGGCCGCTCAGCAACGCCAACTGCCGCTACTTGAGCAGCAGTGGCAAGACACCCAGGTCACCCTGGCAACGCTACTGGGGCTACCGGTGCAACAACTGCCGACCAGTACCGCA < 1:186606/149‑1 CCAACTCGAGCTGGCCCAGCAGCGCAGCCTGGTGGCCGCTCAGCAACGCCAACTGCCGCTACTTGAGCAGCAGTGGCAAGACACCCAGGTCACCCTGGCAACGCTACTGGGGCTACCGGTGCAACAACTGCCGACCAGTACCGCAGCAT > 3:111214/1‑149 CAGTAGCGTTGCCAGGGTGACCTGGGTGTCTTGCCACTGCTGCTCAAGTAGCGGCAGTTGGCGTTGCTGAGCGGCCACCAGGCTGCGCTGCTGGGCCAGCTCGAGTTGGGTGCTGGAGCCGGACTGCTGGCGGGCTTCGACCAGGCTCAGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4757486‑4757333 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcaccCAACTCGAGCTGGCCCAGCAGCGCAGCCTGGTGGCCGCTCAGCAACGCCAACTGCCGCTACTTGAGCAGCAGTGGCAAGACACCCAGGTCACCCTGGCAACGCTACTGGGGCTACCGGTGCAACAACTGCCGACCAGTACCGCAGCAT > NC_002947/4757379‑4757526 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |