New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4757333 =61 (0.960)4 (0.070) 3/252 NT 6.3% coding (606/1413 nt) ompQ outer membrane pyoverdine efflux protein
?NC_002947 4757379 = 62 (1.030)coding (652/1413 nt) ompQ outer membrane pyoverdine efflux protein

CAGTAGCGTTGCCAGGGTGACCTGGGTGTCTTGCCACTGCTGCTCAAGTAGCGGCAGTTGGCGTTGCTGAGCGGCCACCAGGCTGCGCTGCTGGGCCAGCTCGAGTTGGGTGCTGGAGCCGGACTGCTGGCGGGCTTCGACCAGGCTCAGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4757486‑4757333
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcaccCAACTCGAGCTGGCCCAGCAGCGCAGCCTGGTGGCCGCTCAGCAACGCCAACTGCCGCTACTTGAGCAGCAGTGGCAAGACACCCAGGTCACCCTGGCAACGCTACTGGGGCTACCGGTGCAACAACTGCCGACCAGTACCGCAGCAT  >  NC_002947/4757379‑4757526
                                                                                                                                                                                                                                                                                                              
CAGTAGCGTTGCCAGGGTGACCTGGGTGTCTTGCCACTGCTGCTCAAGTAGCGGCAGTTGGCGTTGCTGAGCGGCCACCAGGCTGCGCTGCTGGGCCAGCTCGAGTTGGGTGCTGGAGCCGGACTGCTGGCGGGCTTCGACCAGGCTCA                                                                                                                                                           <  7:25526/149‑1
     GCGTTGCCAGGGTGACCTGGGTGTCTTGCCACTGCTGCTCAAGTAGCGGCAGTTGGCGTTGCTGAGCGGCCACCAGGCTGCGCTGCTGGGCCAGCTCGAGTTGGGTGCTGGAGCCGGACTGCTGGCGGGCTTCGACCAGGCTCAGCA                                                                                                                                                        <  3:110980/147‑1
                              TTGCCACTGCTGCTCAAGTAGCGGCAGTTGGCGTTGCTGAGCGGCCACCAGGCTGCGCTGCTGGGCCAGCTCGAGTTGGGTGCTGGAGCCGGACTGCTGGCGGGCTTCGACCAGGCTCAGCAC                                                                                                                                                       >  1:118447/1‑123
                              TTGCCACTGCTGCTCAAGTAGCGGCAGTTGGCGTTGCTGAGCGGCCACCAGGCTGCGCTGCTGGGCCAGCTCGAGTTGGGTGCTGGAGCCGGACTGCTGGCGGGCTTCGACCAGGCTCAGCAC                                                                                                                                                       <  2:118447/123‑1
                               TGCCACTGCTGCTCAAGTAGCGGCAGTTGGCGTTGCTGAGCGGCCACCAGGCTGCGCTGCTGGGCCAGCTCGAGTTGGGTGCTGGAGCCGGACTGCTGGCGGGCTTCGACCAGGCTCA                                                                                                                                                           <  3:198792/118‑1
                               TGCCACTGCTGCTCAAGTAGCGGCAGTTGGCGTTGCTGAGCGGCCACCAGGCTGCGCTGCTGGGCCAGCTCGAGTTGGGTGCTGGAGCCGGACTGCTGGCGGGCTTCGACCAGGCTCA                                                                                                                                                           >  4:198792/1‑118
                                                                                                            GGTGCTGGAGCCGGACTGCTGGCTGGCTTCGACCAGGCTCAGCACCCAACTCGAGCTGGCACAGCAGCGCAGCCTGGTGGCCGCTCAGCAACGCCAACTGCCGCTACTTGAGCAGCAGTGTCAAGACACCCAGGTCACCCTGGCAACGC                                               >  2:186606/1‑149
                                                                                                              TGCTGGAGCCGGACTGCTGGCGGGCTTCGACCAGGCTCAGCACCCAACTTGAGCTGGCCCAGCAGCGCAGCCTGGTGGCCGCTCAGCAACGCCAACTGCCGCTACTTGAGCAGCAGTGGCAAGACACCCAGGTCACCCTGGCAACGC                                               <  5:38822/147‑1
                                                                                                              TGCTGGAGCCGGACTGCTGGCGGGCTTCGACCAGGCTCAGCACCCAACTTGAGCTGGCCCAGCAGCGCAGCCTGGTGGCCGCTCAGCAACGCCAACTGCCGCTACTTGAGCAGCAGTGGCAAGACACCCAGGTCACCCTGGAAACGC                                               >  6:38822/1‑147
                                                                                                              TGCTGGAGCCGGACTGCTGGCGGGCTTCGACCAGGCTCAGCACCCAACTCGAGCTGGCCCAGCAGCGCAGCCTGGTGGCCGCTCAGCAACGCCAACTGCCGCTACTTGAGCAGCAGTGGCAAGACACCCAGGTCACCCTGGCAACGCTA                                             >  1:392192/1‑149
                                                                                                                                                   CAGCACCCAACTCGAGCTGGCCCAGCAGCGCAGCCTGGTGGCCGCTCAGCAACGCCAACTGCCGCTACTTGAGCAGCAGTGGCAAGACACCCAGGTCACCCTGGCAACGCTACTGGGGCTACCGGTGCAACAACTGCCGACCAGTACCG        <  5:165584/149‑1
                                                                                                                                                     GCACCCAACTCGAGCTGGCCCAGCAGCGCAGCCTGGTGGCCGCTCAGCAACGCCAACTGCCGCTACTTGAGCAGCAGTGGCAAGACACCCAGGTCACCCTGGCAACGCTACTGGGGCTACCGGTGCAACAACTGCCGACCAGTACCGCA      <  1:186606/149‑1
                                                                                                                                                         CCAACTCGAGCTGGCCCAGCAGCGCAGCCTGGTGGCCGCTCAGCAACGCCAACTGCCGCTACTTGAGCAGCAGTGGCAAGACACCCAGGTCACCCTGGCAACGCTACTGGGGCTACCGGTGCAACAACTGCCGACCAGTACCGCAGCAT  >  3:111214/1‑149
                                                                                                                                                                                                                                                                                                              
CAGTAGCGTTGCCAGGGTGACCTGGGTGTCTTGCCACTGCTGCTCAAGTAGCGGCAGTTGGCGTTGCTGAGCGGCCACCAGGCTGCGCTGCTGGGCCAGCTCGAGTTGGGTGCTGGAGCCGGACTGCTGGCGGGCTTCGACCAGGCTCAGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4757486‑4757333
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcaccCAACTCGAGCTGGCCCAGCAGCGCAGCCTGGTGGCCGCTCAGCAACGCCAACTGCCGCTACTTGAGCAGCAGTGGCAAGACACCCAGGTCACCCTGGCAACGCTACTGGGGCTACCGGTGCAACAACTGCCGACCAGTACCGCAGCAT  >  NC_002947/4757379‑4757526

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.