New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5425658 =	69 (1.090)	4 (0.060)	4/266	NT	5.5%	coding (194/1239 nt)	PP_4765	hypothetical protein
	?	NC_002947	5425689 =	68 (1.070)					coding (225/1239 nt)	PP_4765	hypothetical protein

CCTCGATTTCGCCTTGGCGTTCGGCATAGCGTGCCACGAACGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5425702‑5425658 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGCGAAATCGAGGCCCTGCTACGCGACTTCGATGCGGACGCGTTGCGCCAGTGGATTCATGGTTTGGGCATCGAAACCTTCGTCGGCACCTCGGGCCGGGTGTTCCCCACCGACATGAAAGCCGCACCGTTGC  >  NC_002947/5425689‑5425822                                                                                                                                                                                     CCTCGATTTCGCCTTGGCGTTCGGCATAGCGTGCCACGAACGCCGAGGCGAAATCGAGGCCCTGCTACGCGACTTCGATGCGGACGCGTTGCGCCAGTGGATTCATGGTTTGGGCATCGAAACCTTCGTC                                                   >  5:328323/1‑130 CCTCGATTTCGCCTTGGCGTTCGGCATAGCGTGCCACGAACGCCGAGGCGAAATCGAGGCCCTGCTACGCGACTTCGATGCGGACGCGTTGCGCCAGTGGATTCATGGTTTGGGCATCGAAACCTTCGTC                                                   <  6:328323/130‑1  CTCGATTTCGCCTTGGCGTTCGGCATAGCGTGCCACGAACGCCGAGGCGAAATCGAGGCCCTGCTACGCGACTTCGATGCGGACGCGTTGCGCCAGTGGATTCATGGTTTGGGCATCGAAACCTTCGTCGGCACCTCGGGCCGGGTGTT                               >  3:103243/1‑149                               GTGCCACGAACGCCGAGGCGAAATCGAGGCCCTGCTACGCGACTTCGATGCGGACGCGTTGCGCCAGTGGATTCATGGTTTGGGCATCGAAACCTTCGTCGGCACCTCGGGCCGGGTGTTCCCCACCGACATGAAAGCCGCACCGTTGC  <  4:103243/149‑1                                                                                                                                                                                     CCTCGATTTCGCCTTGGCGTTCGGCATAGCGTGCCACGAACGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5425702‑5425658 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGCGAAATCGAGGCCCTGCTACGCGACTTCGATGCGGACGCGTTGCGCCAGTGGATTCATGGTTTGGGCATCGAAACCTTCGTCGGCACCTCGGGCCGGGTGTTCCCCACCGACATGAAAGCCGCACCGTTGC  >  NC_002947/5425689‑5425822

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.