New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5432234	55 (0.870)	5 (0.080)	4/260	NT	7.7%	coding (88/519 nt)	PP_5713	hypothetical protein
	?	NC_002947	= 5432263	66 (1.060)					coding (117/519 nt)	PP_5713	hypothetical protein

CTGCCGGCTGCCCAGCCCTGGCGCCACAGTGCACATCCTCAATGCTATTCAAGGAGTGCACCATGAACGAAACCATTCAGGCCGGGTACGCCAGGTCTTTTCGCGGCAAGCTGTACATGCGCACCGTCGACCGGGACATCCCGCTACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5432085‑5432234 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccCCAGCCGAACTTGTCTGTACTGCGGCTGAGGCGTAGCGGGATGTCCCGGTCGACGGTGCGCATGTACAGCTTGCCGCGAAAAGACCTGGCGTACCCGGCCTGAATGGTTTCGTTCATGGTGCACTCCTTGAATAGCATTGAGGATGTG  <  NC_002947/5432263‑5432116                                                                                                                                                                                                                                                                                                            CTGCCGGCTGCCCAGCCCTGGCGCCACAGTGCACATCCTCAATGCTATTCAAGGAGTGCACCATGAACGAAACCATTCAGGCCGGGTACGCCAGGTCTTTTCGCGGCAAGCTGTACATGCGCACCGTCGACCGGGACATCCCGCTACGC                                                                                                                                                       <  7:270084/149‑1                                 ACATCCTCAATGCTATTCAAGGAGTGCACCATGAACGAAACCATTCAGGCCGGGTACGCCAGGTCTTTTCGCGGCAAGCTGTACATGCGCACCGTCGACCGGGACATCCCGCTACGCCCCAGCCGAACTTGTCTGTACTGCGGCTGAGG                                                                                                                       <  7:208031/149‑1                                  CATCCTCAATGCTATTCAAGGAGTGCACCATGAACGAAACCATTCAGGCCGGGTACGCCAGGTCTTTTCGCGGCAAGCTGTACATGCGCACCGTCGACCGGGACATCCCGCTACGCCCCAGCCGAACTTGTCTGTACTGCGGCTGAGGC                                                                                                                      <  5:337554/149‑1                                         AATGCTATTCAAGGAGTGCACCATGAACGAAACCATTCAGGCCGGGTACGCCAGGTCTTTTCGCGGCAAGCTGTACATGCGCACCGTCGACCGGGACATCCCGCTACGCCCCAGCCGAACTTGTCTGTACTGCGGCTGAGGCGTAGC                                                                                                                 <  3:275343/147‑1                                                                                            CAGGTCTTTTCGCGGCAAGCTGTACATGCGCACCGTCGACCGGGACATCCCGCTACGCCCCAGCCGAACTTGTCTGTACTGCGGCTGAGGC                                                                                                                      >  3:238492/1‑91                                                                                            CAGGTCTTTTCGCGGCAAGCTGTACATGCGCACCGTCGACCGGGACATCCCGCTACGCCCCAGCCGAACTTGTCTGTACTGCGGCTGAGGC                                                                                                                      <  4:238492/91‑1                                                                                                                                                     CCCCAGCCGAACTTGTCTGTACTGCGGCTGAGGCGTAGCGGGATGTCCCGGTCGACGGTGCGCATGTACAGCTTGCCGCGAAAAGACCTGGCGTACCCGGCCTGAATGGTTTCGTTCATGGTGCACTCCTTGAATAGCATTGAGGATGT   <  7:337654/149‑1                                                                                                                                                      CCCAGCCGAACTTGTCTGTACTGCGGCTGAGGCGTAGCGGGATGTCCCGGTCGACGGTGCGCATGTACAGCTTGCCGCGAAAAGACCTGGCGTACCCGGCCTGAATGGTTTCGTTCATGGTGCACTCCTTGAATAGCATTGAGGATGTG  >  4:85085/1‑149                                                                                                                                                                                                                                                                                                            CTGCCGGCTGCCCAGCCCTGGCGCCACAGTGCACATCCTCAATGCTATTCAAGGAGTGCACCATGAACGAAACCATTCAGGCCGGGTACGCCAGGTCTTTTCGCGGCAAGCTGTACATGCGCACCGTCGACCGGGACATCCCGCTACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5432085‑5432234 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccCCAGCCGAACTTGTCTGTACTGCGGCTGAGGCGTAGCGGGATGTCCCGGTCGACGGTGCGCATGTACAGCTTGCCGCGAAAAGACCTGGCGTACCCGGCCTGAATGGTTTCGTTCATGGTGCACTCCTTGAATAGCATTGAGGATGTG  <  NC_002947/5432263‑5432116

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.