New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5432474 =82 (1.290)4 (0.070) 4/252 NT 5.1% coding (328/519 nt) PP_5713 hypothetical protein
?NC_002947 5432525 = 71 (1.180)coding (379/519 nt) PP_5713 hypothetical protein

CCTCAATAGGAACGTGATCACTTCGCCTTCCTCGACGTTGAGCCAGGCTACCCACTCCCCACTCCTGTGCGGCGTATCCGTGAGGGCGCCGACCCTGTAGCCCCGCTGGTCGCGCAGATGGCAGACAAGTCCTTCATCTGTCAGCGCCAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5432626‑5432474
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcggGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTATTGAGGCAGGCAGATCGAGCTTCACTGGCCGGGGCAATACGATGAAT  >  NC_002947/5432525‑5432667
                                                                                                                                                                                                                                                                                                        
CCTCAATAGGAACGTGATCACTTCGCCTTCCTCGACGTTGAGCCAGGCTACCCACTCCCCACTCCTGTGCGGCGTATCCGTGAGGGCGCCGACCCTGTAGCCCCGCTGGTCGCGCAGATGGCAGACAAGTCCTTCATCTGTCAGCGC                                                                                                                                                       <  5:123699/147‑1
  TCAATAGGAACGTGATCACTTCGCCTTCCTCGACGTTGAGCCAGGCTACCCACTCCCCACTCCTGTGCGGCGTATCCGTGAGGGCGCCGACCCTGTAGCCCCGCTGGTCGCGCAGATGGCAGACAAGTCCTTCATCTGTCAGCGCCAGC                                                                                                                                                   >  1:335341/1‑149
  TCAATAGGAACGTGATCACTTCGCCTTCCTCGACGTTGAGCCAGGCTACCCACTCCCCACTCCTGTGCGGCGTATCCGTGAGGGCGCCGACCCTGTAGCCCCGCTGGTCGCGCAGATGGCAGACAAGTCCTTCATCTGTCAGCGCCAGC                                                                                                                                                   >  3:27710/1‑149
  TCAATAGGAACGTGATCACTTCGCCTTCCTCGACGTTGAGCCAGGCTACCCACTCCCCACTCCTGTGCGGCGTATCCGTGAGGGCGCCGACCCTGTAGCCCCGCTGGTCGCGCAGATGGCAGACAAGTCCTTCATCTGTCAGCGCCAGC                                                                                                                                                   >  6:61644/1‑149
    AATAGGAACGTGATCACTTCGCCTTCCTCGACGTTGAGCCAGGCTACCCACTCCCCACTCCTGTGCGGCGTATCCGTGAGGGCGCCGACCCTGTAGCCCCGCTGGTCGCGCAGATGGCAGACAAGTCCTTCATCTGTCAGCGCCAGC                                                                                                                                                   <  3:326482/147‑1
                                                                                                     CCCGCTGGTCGCGCAGATGGCAGACAAGTCCTTCATCTGTCAGCGCCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTAT                                                >  3:205313/1‑149
                                                                                                      CCGCTGGTCGCGCAGATGGCAGACAAGTCCTTCATCTGTCAGCGCCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTATT                                               >  2:140270/1‑149
                                                                                                        GCTGGTCGCGCAGATGGCAGACAAGTCCTTCATCTGTCAGCGCCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTATTGA                                             <  1:140270/149‑1
                                                                                                                        GCAGACAAGTCCTTCATCTGTCAGCGCCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTATTGAGGCAGGCAGATCGAG                              <  4:205313/148‑1
                                                                                                                                                  CCAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTATTGAGGCAGGCAGATCGAGCTTCACTGGCCGGGGCAATACGATGAA   >  4:152514/1‑149
                                                                                                                                                   CAGCGGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTATTGAGGCAGGCAGATCGAGCTTCACTGGCCGGGGCAATACGATGAAT  >  5:167268/1‑149
                                                                                                                                                       GGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTATTGAGGCAGGCAGATCGAGCTTCACTGGCCGGGGCAATA          >  1:65105/1‑137
                                                                                                                                                       GGGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTATTGAGGCAGGCAGATCGAGCTTCACTGGCCGGGGCAATA          <  2:65105/137‑1
                                                                                                                                                                                                                                                                                                        
CCTCAATAGGAACGTGATCACTTCGCCTTCCTCGACGTTGAGCCAGGCTACCCACTCCCCACTCCTGTGCGGCGTATCCGTGAGGGCGCCGACCCTGTAGCCCCGCTGGTCGCGCAGATGGCAGACAAGTCCTTCATCTGTCAGCGCCAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5432626‑5432474
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcggGGCTACAGGGTCGGCGCCCTCACGGATACGCCGCACAGGAGTGGGGAGTGGGTAGCCTGGCTCAACGTCGAGGAAGGCGAAGTGATCACGTTCCTATTGAGGCAGGCAGATCGAGCTTCACTGGCCGGGGCAATACGATGAAT  >  NC_002947/5432525‑5432667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.