| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5637838 = | 105 (1.650) | 3 (0.050) | 3/254 | NT | 3.1% | coding (372/1443 nt) | PP_4949 | TldD/PmbA family peptidase |
| ? | NC_002947 | 5637879 = | 90 (1.480) | coding (413/1443 nt) | PP_4949 | TldD/PmbA family peptidase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCGGGAACAGGAAGCGCTGGGCATGGCGCAGTTCGGCGCCGGCCGAGTTCAGGTAGGTTTGCTCGACCAGGCTCAGCCCCAGGCTGGCCTGCCAGTCCACCAAACGGCTGTCCTTGGGCACGCTGGCCGATTCGGCGGCGAGCAGGCCAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5637989‑5637838‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaaggACAGCCGTTTGGTGGACTGGCAGGCCAGCCTGGGGCTGAGCCTGGTCGAGCAAACCTACCTGAACTCGGCCGGCGCCGAACTGCGCCATGCCCAGCGCTTCCTGTTCCCGGGCCTGGGGGTGACCGCCAGCGACGGCCAGGACAGCC > NC_002947/5637879‑5638025 CCGGGAACAGGAAGCGCTGGGCATGGCGCAGTTCGGCGCCGGCCGAGTTCAGGTAGGTTTGCTCGACCAGGCTCAGCCCCAGGCTGGCCTGCCAGTCCACCAAACGGCTGTCCTTGGGCACGCTGGCCGATTCGGCGGCGAGCAGGCC > 4:211800/1‑148 GGAACAGGAAGCGCTGGGCATGGCGCAGTTCGGCGCCGGCCGAGTTCAGGTAGGTTTGCTCGACCAGGCTCAGCCCCAGGCTGGCCTGCCAGTCCACCAAACGGCTGTCCTTGGGCACGCTGGCCGATTCGGCGGCGAGCAGGCCAAGG > 7:112325/1‑149 GTAGGTTTGCTCGACCAGGCTCAGCCCCAGGCTGGCCTGCCAGTCCACCAAACGGCTGTCCTTGGGCACGCTGGCCGATTCGGCGGCGAGCAGGCCAAGG < 1:70905/100‑1 GTAGGTTTGCTCGACCAGGCTCAGCCCCAGGCTGGCCTGCCAGTCCACCAAACGGCTGTCCTTGGGCACGCTGGCCGATTCGGCGGCGAGCAGGCCAAGG > 2:70905/1‑100 TCCTTGGGCACGCTGGCCGATTCGGCGGCGAGCAGGCCAAGGACAGCCGTTTGGTGGACTGGCAGGCCAGCCTGGGGCTGAGCCTGGTCGAGCAAACCTACCTGAACTCGGCCGGCGCCGAACTGCGCCATGCCCAGCGCTTCCTGTTC > 7:240386/1‑149 TTGGGCACACTGGCCGATTCGGCGGCGAGCAGGCCAAGGACAGCCGTTTGGTGGACTGGCAGGCCAGCCTGGGGCTGAGCCTGGTCGAGCAAACCTACCTGAAC < 5:316769/104‑1 TTGGGCACACTGGCCGATTCGGCGGCGAGCAGGCCAAGGACAGCCGTTTGGTGGACTGGCAGGCCAGCCTGGGGCTGAGCCTGGTCGAGCAAACCTACCTGAAC > 6:316769/1‑104 CCAAGGACAGCCGTTTGGTGGACTGGCAGGCCAGCCTGGGGCTGAGCCTGGTCGAGCAAACCTACCTGAACTCGGCCGGCGCCGAACTGCGCCATGCCCAGCGCTTCCTGTTCCCGGGCCTGGGGGTGACCGCCAGCGACGGCCAGGA > 3:46583/1‑148 CCAAGGACAGCCGTTTGGTGGACTGGCAGGCCAGCCTGGGGCTGAGCCTGGTCGAGCAAACCTACCTGAACTCGGCCGGCGCCGAACTGCGCCATGCCCAGCGCTTCCTGTTCCCGGGCCTGGGGGTGACCGCCAGCGACGGCCAGGA > 7:148914/1‑148 CCAAGGACAGCCGTTTGGTGGACTGGCAGGCCAGCCTGGGGCTGAGCCTGGTCGAGCAAACCTACCTGAACTCGGCCGGCGCCGAACTGCGCCATG > 3:375170/1‑96 CCAAGGACAGCCGTTTGGTGGACTGGCAGGCCAGCCTGGGGCTGAGCCTGGTCGAGCAAACCTACCTGAACTCGGCCGGCGCCGAACTGCGCCATG < 4:375170/96‑1 GGACAGCCGTTTGGTGGACTGGCAGGCCAGCCTGGGGCTGAGCCTGGTCGAGCAAACCTACCTGAACTCGGCCGGCGCCGAACTGCGCCATGCCCAGCGCTTCCTGTTCCCGGGCCTGGGGGTGACCGCCAGCGACGGCCAGGACAGCC < 4:103611/149‑1 CCGGGAACAGGAAGCGCTGGGCATGGCGCAGTTCGGCGCCGGCCGAGTTCAGGTAGGTTTGCTCGACCAGGCTCAGCCCCAGGCTGGCCTGCCAGTCCACCAAACGGCTGTCCTTGGGCACGCTGGCCGATTCGGCGGCGAGCAGGCCAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5637989‑5637838‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaaggACAGCCGTTTGGTGGACTGGCAGGCCAGCCTGGGGCTGAGCCTGGTCGAGCAAACCTACCTGAACTCGGCCGGCGCCGAACTGCGCCATGCCCAGCGCTTCCTGTTCCCGGGCCTGGGGGTGACCGCCAGCGACGGCCAGGACAGCC > NC_002947/5637879‑5638025 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |