New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 567163847 (0.740)6 (0.120) 6/218 NT 12.2% intergenic (+57/‑113) PP_4978/PP_4979 hypothetical protein/substrate‑binding protein
?NC_002947 = 5671675 48 (0.920)intergenic (+94/‑76) PP_4978/PP_4979 hypothetical protein/substrate‑binding protein

CCACGTGGAGCCCGAGCGGCTGCGTCAGTGCCTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5671467‑5671638
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcgggcgtgcccgcgaaCACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCCACAAGACCGCGCAAGACAATGAGTTTTGCGGGCACATCAGGCTTGGGTGGATCGCAGCAGATGCGCCTCGATATCCTTGCGCCGCTCGCC  <  NC_002947/5671675‑5671528
                                                                                                                                                                                                                                                                                                                                
CCACGTGGAGCCCGAGCGGCTGCGTCAGTGCCTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAATGATATCGAGGCGCATCTGCTGAGATACAACCAAGCCTGATGTGCAAGCAAAACTCATTGTCTTGCGCGGTCTT                                                                                                                                                                             >  4:150336/1‑149
  ACGTGGAGCCCGAGCGGCTGCGTCAGTGCCTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGT                                                                                                                                                                           >  1:118988/1‑149
     TGGAGCCCGAGCGGCTGCGTCAGTGCCTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGG                                                                                                                                                                        <  6:61379/149‑1
     TGGAGCCCGAGCGGCTGCGTCAGTGCCTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGG                                                                                                                                                                        <  7:210303/149‑1
      GGAGCCCGAGCGGCTGCGTCAGTGCCTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGA                                                                                                                                                                       <  2:136226/149‑1
        AGCCCGAGCTGCTGCTTCAGTGCCTGCGCCATCCGTGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGC                                                                                                                                                                     <  3:150336/149‑1
            CGAGCGGCTGCGTCAGTGCCTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGC                                                                                                                                                                 <  6:173179/149‑1
              AGCGGCTGCGTCAGTGCCTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGT                                                                                                                                                               <  2:281946/149‑1
                       GTCAGTGCCTGCACCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGta                                                                                                                                                      <  7:362437/149‑3
                               CTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAACACCGGC                                                                                                                                               >  4:130365/1‑148
                                     CATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCG                                                                                                                                        >  6:371689/1‑149
                                     CATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTG                                                                                                                                                                          >  2:291581/1‑115
                                     CATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTG                                                                                                                                                                          <  1:291581/115‑1
                                                                 AGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGC                                                                                                            <  5:209109/149‑1
                                                                   CGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGG                                                                                                          <  3:130365/149‑1
                                                                       GCAAGGATTTCGAGTCGCATCTGCTTCGATCCACCCATGCCTGATGTGCCCGCAAAAGTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCGCGCGAACACCGTCGAATCCGGTGCCAACGATCGGGTTGCTCTCTTCGCTGGCAC                                                                                                      <  5:222552/149‑1
                                                                         AAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGC                                                                                                    <  5:371689/149‑1
                                                                                                                                                        GGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCAACGATCGGGGTGCTCTCTTCGCGGGCCCGCCCGCTCCCACAAGACCGCGCCAGACAATGAGGTTTGCGGGCACCTCAGGCTTGGGTGGCTCGCCGCAGATGCGGCTC                       >  8:153470/1‑147
                                                                                                                                                               GCGTGCCCGCGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCCACAAGACCGCGCAAGACAATGAGTTTTGCGGGCACATCAGGCTTGGGTGGATCGCAGCAGATGCGCCTCGAT                    <  2:356429/143‑1
                                                                                                                                                               GCGTGCCCGCGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCCACAAGACCGCGCAAGACAATGAGTTTTGCGGGCACATCAGGCTTGGGTGGATCGCAGCAGATGCGCCTCGAT                    >  1:356429/1‑143
                                                                                                                                                                   GCCCGCGAACACCGGCGACGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCCACAAGACCGCGCAAGACAATGAGTTTTGCGGGCACATCAGGCTTGGGTGGATCGCAGCAGATGCGCCTCGATATCCTTGCGC          <  6:270874/149‑1
                                                                                                                                                                   GCCCGCGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCCACAAGACCGCGCAAGACAATGAGTTTTGCGGGCACATCAGGCTTGGGTGGATCGCAGCAGATGCGCCTCGATATCCTTGCGC          >  8:123752/1‑149
                                                                                                                                                                     CCGCGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCCACAAGACCGCGCAAGACAATGAGTTTTGCGGGCACATCAGGCTTGGGTGGATCGCAGCAGATGCGCCTCGATATCCTTGCGCCG        >  6:221390/1‑149
                                                                                                                                                                      CGCGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCCACAAGACCGCGCAAGACAATGAGTTTTGCGGGCACATCAGGCTTGGGTGGATCGCAGCAGATGCGCCTCGATATCCTTGCGCCGC       >  5:4015/1‑149
                                                                                                                                                                        CGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCCACAAGACCGCGCAAGACAATGAGTTTTGCGGGCACATCAGGCTTGGGTGGATCGCAGCAGATGCGCCTCG                      <  6:322125/132‑1
                                                                                                                                                                        CGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCCACAAGACCGCGCAAGACAATGAGTTTTGCGGGCACATCAGGCTTGGGTGGATCGCAGCAGATGCGCCTCG                      >  5:322125/1‑132
                                                                                                                                                                           ACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCCACAAGACCGCGCAAGACAATGAGTTTTGCGGGCACATCAGGCTTGGGTGGATCGCAGCAGATGCGCCTCGATATCCTTGCGCCGCTCGCC  <  7:123752/149‑1
                                                                                                                                                                                                                                                                                                                                
CCACGTGGAGCCCGAGCGGCTGCGTCAGTGCCTGCGCCATCCGGGGCTACGGCTATCGCTGGGCGAGCGGCGCAAGGATATCGAGGCGCATCTGCTGCGATCCACCCAAGCCTGATGTGCCCGCAAAACTCATTGTCTTGCGCGGTCTTGTGGGAGCGGGCGTGCCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5671467‑5671638
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcgggcgtgcccgcgaaCACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCCACAAGACCGCGCAAGACAATGAGTTTTGCGGGCACATCAGGCTTGGGTGGATCGCAGCAGATGCGCCTCGATATCCTTGCGCCGCTCGCC  <  NC_002947/5671675‑5671528

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.