New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5731004 =	72 (1.130)	4 (0.070)	4/254	NT	5.7%	coding (336/804 nt)	hutG	N‑formylglutamate deformylase
	?	NC_002947	5731040 =	64 (1.060)					coding (300/804 nt)	hutG	N‑formylglutamate deformylase

TGGCCGCAGAGTACTCACGCTTCGTCATCGACCTGAACCGTCCGGAGGACGACAAGCCGCTGTACGTCGGCGCCACCACGGGCTTGTACCCGGCGACCTTGTTCGGCGGCGAACCCCTCTTCAAAGACGGGCTGGCGCCGTCTGGCGAAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5731155‑5731004 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagagGGGTTCGCCGCCGAACAAGGTCGCCGGGTACAAGCCCGTGGTGGCGCCGACGTACAGCGGCTTGTCGTCCTCCGGACGGTTCAGGTCGATGACGAAGCGTGAGTACTCTGCGGCCACCACGCTGGCGCCCATGTCACGGGCAAAGTCG  >  NC_002947/5731040‑5731187                                                                                                                                                                                                                                                                                                              TGGCCTGAGAGTACTCACGCTTCGTCATCGACCTGAACCGTCCGGAGGACGACAAGCCGCTTTACGTCGGCGCCACCACGGGCTTGTACCCGGCGACCTTGTTCGGCGGCGAACCCCTCTTCAAAGACGGGCTGGCGCCGTCTGGCGAA                                                                                                                                                         <  6:313651/149‑1   GCCGCAGAGTACTCACGCTTCGTCATCGACCTGAACCGTCCGGAGGACGACAAGCCGCTGTACGTCGGCGCCACCACGGGCTTGTACCCGGCGACCTTGTTCGGCGGCGAACCCCTCTTCAAAGACGGGCTGGCGCCGTCTGGCGAAGA                                                                                                                                                       <  2:119926/149‑1                                                                                                                   CCCTCTTCAAAGACGGGCTGGCGCCGTCTGGCGAAGAGGGGTTCGCCGCCGAACAAGGTCGCCGGGTACAAGCCCGTGGTGGCGCCGACGTACAGCGGCTTGTCGTCCTCCGGACGGTTCAGGTCGATGACGAAGCGTGAGTACTCTGC                                       >  5:75061/1‑149                                                                                                                    CCTCTTCAAAGACGGGCTGGCGCCGTCTGGCGAAGAGGGGTTCGCCGCCGAACAAGGTCGCCGGGTACAAGCCCGTGGTGGCGCCGACGTACAGCGGCTTGTCGTCCTCCGGACGGTTCAGGTCGATGACGAAGCGTGAGTACTCTGCG                                      >  7:104635/1‑149                                                                                                                     CTCTTCAAAGACGGGCTGGCGCCGTCTGGCGAAGAGGGGTTCGCCGCCGAACAAGGTCGCCGGGTACAAGCCCGTGGTGGCGCCGACGTACAGCGGCTTGTCGTCCTCCGGACGGTTCAGGTCGATGACGAAGCGTGAGTACTCTGCGG                                     >  1:176920/1‑149                                                                                                                           AAAGACGGGCTGGCGCCGTCT‑TTGAAGAGGGGTTCGCCGCCGAACAAGGTCGCCGGGTACAAGCCCGTGGTGGCGCCGACGTACAGCGGCTTGTCGTCCTCCGGACGCTTCAGGTCGATGACGAACCGTGAGTACTCTGCGGCCACCAC                              >  3:223584/1‑149                                                                                                                                                   GAAGAGGGGTTCGCCGCCGAACAAGGTCGCCGGGTACAAGCCCGTGGTGGCGCCGACGTACAGCGGCTTGTCGTCCTCCGGACGGTTCAGGTCGATGACGAAGCGTGAGTACTCTGCGGCCACCACGCTGGCGCCCATGTCACGGGCA        >  5:90151/1‑148                                                                                                                                                        GGGGTTCGCCGCCGAACAAGGTCGCCGGGTACAAGCCCGTGGTGGCGCCGACGTACAGCGGCTTGTCGTCCTCCGGACGGTTCAGGTCGATGACGAAGCGTGAGTACTCTGCGGCCACCACGCTGGCGCCCATGTCACGGGCAAAGTCG  <  7:188014/149‑1                                                                                                                                                                                                                                                                                                              TGGCCGCAGAGTACTCACGCTTCGTCATCGACCTGAACCGTCCGGAGGACGACAAGCCGCTGTACGTCGGCGCCACCACGGGCTTGTACCCGGCGACCTTGTTCGGCGGCGAACCCCTCTTCAAAGACGGGCTGGCGCCGTCTGGCGAAGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5731155‑5731004 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagagGGGTTCGCCGCCGAACAAGGTCGCCGGGTACAAGCCCGTGGTGGCGCCGACGTACAGCGGCTTGTCGTCCTCCGGACGGTTCAGGTCGATGACGAAGCGTGAGTACTCTGCGGCCACCACGCTGGCGCCCATGTCACGGGCAAAGTCG  >  NC_002947/5731040‑5731187

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.