| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5924517 | 54 (0.850) | 4 (0.070) | 4/256 | NT | 6.7% | intergenic (‑87/+110) | gcvP‑II/gcvH‑II | glycine dehydrogenase/glycine cleavage system protein H |
| ? | NC_002947 | = 5924555 | 60 (0.980) | intergenic (‑125/+72) | gcvP‑II/gcvH‑II | glycine dehydrogenase/glycine cleavage system protein H | |||||
CCAGGTGGCGACGCAGAAACGGGTTGAGCTCTTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5924367‑5924517‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcagCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGGCCTGGTCTAGGAAGAGAGCGTCGTCATGTCCCAGTCGCCATCCC < NC_002947/5924555‑5924412 CCAGGTGGCGACGCAGAAACGGGTTGAGCTCTTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGC < 2:386411/149‑1 CAGGTGGCGACGCAGAAACGGGTTGAGCTCTTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTG > 3:281164/1‑147 CAGGTGGCGACGCAGAAACGGGTTGAGCTCTTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTG < 4:281164/147‑1 AGGTGGCGACGCAGAAACGGGTTGAGCTCTTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAG > 7:178011/1‑149 GACGCAGAAACGGGTTGAGCTCTTGCAGTTGTTGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGCCCCTG > 1:241181/1‑148 TCTTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTG > 5:393673/1‑119 TCTTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTG < 6:393673/119‑1 GATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGG > 5:380741/1‑149 GCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAA < 2:241181/148‑1 CGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGT < 6:380741/149‑1 TGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGACGCCGGGCCTGCAAACAAGTTTCCCCGCAGAATCGGCAATCCCTTCCTAGACTTGTAAGTTACCATTAGGCAAGGTCTAGGAAGAGAGCTTCGTCATGTCCCAGTCGCCAaacc > 6:280464/1‑145 CCAGGTGGCGACGCAGAAACGGGTTGAGCTCTTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5924367‑5924517‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcagCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGGCCTGGTCTAGGAAGAGAGCGTCGTCATGTCCCAGTCGCCATCCC < NC_002947/5924555‑5924412 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |