| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6036425 | 70 (1.100) | 3 (0.050) | 3/256 | NT | 4.1% | coding (955/1392 nt) | algC | phosphomannomutase/phosphoglucomutase |
| ? | NC_002947 | = 6036450 | 73 (1.190) | coding (980/1392 nt) | algC | phosphomannomutase/phosphoglucomutase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCAGGACGTGCTGTCGCGCAACCCGGGCGCCGAGATCATCTTCGACGTCAAATGCACCCGCCGCCTGACCCCGTTGATCGAACAGCACGGTGGCCGCGCCTTGATGTGGAAAACCGGCCATTCGCTGATCAAGAAGAAGATGAAGCAGACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6036274‑6036425‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccgCTCATCTCGCCTGCCAGCAGCGAACCGGTCTGCTTCATCTTCTTCTTGATCAGCGAATGGCCGGTTTTCCACATCAAGGCGCGGCCACCGTGCTGTTCGATCAACGGGGTCAGGCGGCGGGTGCATTTGACGTCGAAGATGATCTCG < NC_002947/6036450‑6036304 CCAGGACGTGCTGTCGCGCAACCCGGGCGCCGAGATCATCTTCGACGTCAAATGCACCCGCCGCCTGACCCCGTTGATCGAACAGCACGGTGGCCGCGCCTTGATGTGGAAAACCGGCCATTCGCTGATCAAGAAGAAGATGAAGCAGA > 1:165352/1‑149CCAGGACGTGCTGTCGCGCAACCCGGGCGCCGAGATCATCTTCGACGTCAAATGCACCCGCCGCCTGACCCCGTTGATCGAACAGCACGGTGGCCGCGCCTTGATGTGGAAAACCGGCCATTCGCTGATCAAGAAGAAGATGAAGCAGA > 3:92736/1‑149 CAGGACGTGCTGTCGCGCAACCCGGGCGCCGAGATCATCTTCGACGTCAAATGCACCCGCCGCCTGACCCCGTTGATCGAACAGCACGGTGGCCGCGCCTTGATGTGGAAAACCGGCCATTCGCTGATCAAGAAGAAGATGAAGCAGAC > 3:303876/1‑149 CAGGACGTGCTGTCGCGCAACCCGGGCGCCGAGATCATCTTCGACGTCAAATGCACCCGCCGCCTGACCCCGTTGATCGAACAGCACGGTGGCCGCGCCTTGATGTGGAAAACCGGCCATTCGCTGATCAAGAAGAAGATGAAGCAGAC < 4:303876/149‑1 CAGGACGTGCTGTCGCGCAACCCGGGCGCCGAGATCATCTTCGACGTCAAATGCACCCGCCGCCTGACCCCGTTGATCAAACAGCACGGTGGCCGCGCCTGGATGTGGAAAACCGGCCATTCGCTGATCAAGAAGAAGATGAAGCAGAC > 4:70787/1‑149 GCGCAACCCGGGCGCCGAGATCATCTTCGACGTCAAATGCACCCGCCGCCTGACCCCGTTGATCGAACAGCACGGTGGCCGCGCCTTGATGTGGAAAACCGGCCATTCGCTGATCAAGAAGAAGATGAAGCAGAC < 6:348273/135‑1 CGACGTCAAATGCACCCGCCGCCTGACCCCGTTGATCGAACAGCACGGTGGCCGCGCCTTGATGTGGAAAACCGGCCATTCGCTGATCAAGAAGAAGATGAAGCAGACCGCTCATCTCGCCTGCCAGCAGCGAACCGGTCTGCTTC < 2:123682/146‑1 TCAAATGCACCCGCCGCCTGACCCCGTTGATCGAACAGCACGGTGGCCGCGCCTTGATGTGGAAAACCGGCCATTCGCTGATCAAGAAGAAGATGAAGCAGACCGCTCATCTCGCCTGCCAGCAGCGAACCGGTCTGCTTCAT < 3:99719/143‑1 TCAAATGCACCCGCCGCCTGACCCCGTTGATCGAACAGCACGGTGGCCGCGCCTTGATGTGGAAAACCGGCCATTCGCTGATCAAGAAGAAGATGAAGCAGACCGCTCATCTCGCCTGCCAGCAGCGAACCGGTCTGCTTCAT > 4:99719/1‑143 ACCGCTCATCTCGCCTGCCAGCAGCGAACCGGTCTGCTTCATCTTCTTCTTGATCAGCGAATGGCCGGTTTTCCACATCAAGGCGCGGCCACCGTGCTGTTCGATCAACGGGGTCAGGCGGCGGGTGCATTTGACGTCGAAGATGATCT > 3:348058/1‑149 CGCTCATCTCGCCTGCCAGCAGCGAACCGGTCTGCTTCATCTTCTTCTTGATCAGCGAATGGCCGGTTTTCCACATCAAGGCGCGGCCACCGTGCTGTTCGATCAACGGGGTCAGGCGGCGGGTGCATTTGACGTCGAAGATGATCTCG < 4:348058/149‑1 CGCTCATCTCGCCTGCCAGCAGCGAACCGGTCTGCTTCATCTTCTTCTTGATCAGCGAATGGCCGGTTTTCCACATCAAGGCGCGGCCACCGTGCTGTTCGATCAACGGGGTCAGGCGGCGGGTGCATTTGACGTCGAAGATGATCTCG < 5:321251/149‑1 CCAGGACGTGCTGTCGCGCAACCCGGGCGCCGAGATCATCTTCGACGTCAAATGCACCCGCCGCCTGACCCCGTTGATCGAACAGCACGGTGGCCGCGCCTTGATGTGGAAAACCGGCCATTCGCTGATCAAGAAGAAGATGAAGCAGACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6036274‑6036425‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccgCTCATCTCGCCTGCCAGCAGCGAACCGGTCTGCTTCATCTTCTTCTTGATCAGCGAATGGCCGGTTTTCCACATCAAGGCGCGGCCACCGTGCTGTTCGATCAACGGGGTCAGGCGGCGGGTGCATTTGACGTCGAAGATGATCTCG < NC_002947/6036450‑6036304 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |