New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 319056	54 (0.850)	3 (0.050)	3/250	NT	5.4%	coding (686/1815 nt)	PP_0264	sensor histidine kinase
	?	NC_002947	= 319086	54 (0.900)					coding (656/1815 nt)	PP_0264	sensor histidine kinase

ATCAACCAGCGTGCGCGGGGCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCA  >  NC_002947/318908‑319203                                                                                                                                                     |                                                                                                                                                    aTCAACCAGCGTGCGCGGGGCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCT                                                                                                                                                     >  4:22424‑M1/1‑149 (MQ=255)    aaCCAGCGTGCGCGGGGCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCgg                                                                                                                                                  >  3:10010/1‑149 (MQ=255)    aaCCAGCGTGCGCGGGGCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCg                                                                                                                                                   <  4:263573/148‑1 (MQ=255)       cAGCGTGCGCGGGGCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGTCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGt                                                                                                                                               <  6:377867/149‑1 (MQ=255)       cAGCGTGCGCGGGGCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGt                                                                                                                                               <  6:249795/149‑1 (MQ=255)         gCGTGCGCGGGGCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCg                                                                                                                                             >  7:281879/1‑149 (MQ=255)         gCGTGCGCGGGGCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCg                                                                                                                                             >  1:180000/1‑149 (MQ=255)          cGTGCGCGGGGCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCgg                                                                                                                                            <  6:319555/149‑1 (MQ=255)               gcgGGGCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCa                                                                                                                                         <  7:228087/147‑1 (MQ=255)               gcgGGGCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCa                                                                                                                                         >  8:228087/1‑147 (MQ=255)                   ggCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGc                                                                                                                                   <  3:117208/149‑1 (MQ=255)                    gCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCg                                                                                                                                  <  4:29561/149‑1 (MQ=255)                     cGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGTCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCgg                                                                                                                                 <  4:45347/149‑1 (MQ=255)                      gAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGTTGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCggg                                                                                                                                >  8:59999/1‑149 (MQ=255)                         gATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTa                                                                                                                              <  8:130271/148‑1 (MQ=255)                              tGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACg                                                                                                                         >  6:170470/1‑148 (MQ=255)                                  ttGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTtccgtgctacccgcacgctgaccgacgccgagc                                                                                                                    >  5:283890‑M1/1‑116 (MQ=255)                                      cAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTtccgtgctacccgcacgctgaccgacgccgagcgcca                                                                                                                <  6:283890‑M1/149‑38 (MQ=255)                                      cAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAagcgc                                                                                                                  <  4:2952‑M2/147‑6 (MQ=255)                                       aaCCAGTTTCCTTGATGTCGAGGGTCTGGTTGATGCATGCCTGCGGGTTGAGATCCTGCGTCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTtccgtgctaccctcacgctgaccgacgccgagcgccag                                                                                                               <  8:272446‑M1/149‑39 (MQ=255)                                           aGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCgg                                                                                                           <  3:2952/149‑1 (MQ=255)                                                 cTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTGGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCcgc                                                                                                      >  5:332727/1‑148 (MQ=255)                                                 cTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCcgc                                                                                                      >  3:95388/1‑148 (MQ=255)                                                            gggTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCATCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGaa                                                                                                   <  8:301102/140‑1 (MQ=255)                                                            gggTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGaa                                                                                                   >  7:301102/1‑140 (MQ=255)                                                            gggTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGAt                                                                                           >  8:12421/1‑148 (MQ=255)                                                            gggTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATg                                                                                          <  2:180000/149‑1 (MQ=255)                                                                   ggTCATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGAGCCGCGAAGTCAGGATGACCAc                                                                                     <  7:59999/147‑1 (MQ=255)                                                                     tGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCa                                                                                 <  6:342660/149‑1 (MQ=255)                                                                       aTCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCAtt                                                                               <  4:10010/149‑1 (MQ=255)                                                                        tCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATtg                                                                              <  2:229211/149‑1 (MQ=255)                                                                           aGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGa                                                                           <  8:304129/149‑1 (MQ=255)                                                                            ggCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGAt                                                                          <  6:7795/149‑1 (MQ=255)                                                                            ggCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGAAGACCACGCCATTGTGAt                                                                          <  3:22424/149‑1 (MQ=255)                                                                              ccTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCg                                                                        >  7:296339/1‑149 (MQ=255)                                                                                      ttGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCaa                                                                >  8:42491/1‑149 (MQ=255)                                                                                         agaACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACa                                                              <  4:91101/148‑1 (MQ=255)                                                                                         agaACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAg                                                             >  2:225235/1‑149 (MQ=255)                                                                                          gaACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAgc                                                            >  2:97796/1‑149 (MQ=255)                                                                                          gaACCAGCGGCTGTGGGGACTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGAGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGACGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAgc                                                            >  8:174723/1‑149 (MQ=255)                                                                                           aaCCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAACCCCCAGTCGGGCCGCCAAGTCAGAATGCCAACGCAATTGTGATCGGACAGCAACAcct                                                           >  6:312913/1‑149 (MQ=255)                                                                                                 cGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCgg                                                     <  6:332727/149‑1 (MQ=255)                                                                                                   gCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGc                                                   <  8:281879/149‑1 (MQ=255)                                                                                                         gggCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCgg                                                                       <  5:386568/123‑1 (MQ=255)                                                                                                         gggCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCgg                                                                       >  6:386568/1‑123 (MQ=255)                                                                                                                    ggATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAggg                                   <  7:38474/148‑1 (MQ=255)                                                                                                                     gATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCa                                                                    <  6:60762/114‑1 (MQ=255)                                                                                                                     gATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCa                                                                    >  5:60762/1‑114 (MQ=255)                                                                                                                     gATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGtt                                 >  1:95049/1‑149 (MQ=255)                                                                                                                      aTAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCTGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGttt                                <  5:170470/149‑1 (MQ=255)                                                                                                                          ggCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGgt                            >  3:37842/1‑149 (MQ=255)                                                                                                                           gCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGgtg                           >  4:74546/1‑149 (MQ=255)                                                                                                                           gCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGGGCGGGTTGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGgt                            <  5:312913/148‑1 (MQ=255)                                                                                                                               gATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGtgtg                         <  2:126868/147‑1 (MQ=255)                                                                                                                                aTGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTc                      <  3:74546/149‑1 (MQ=255)                                                                                                                                     gatgatGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCATTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTc                      >  6:41705/1‑144 (MQ=255)                                                                                                                                     gatgatGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGAt                 <  5:223195/149‑1 (MQ=255)                                                                                                                                         atgGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCATTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGa              <  5:41705/148‑1 (MQ=255)                                                                                                                                            gCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACttt          <  2:106468/149‑1 (MQ=255)                                                                                                                                             ccTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTg         <  7:42491/149‑1 (MQ=255)                                                                                                                                              cTGGCGCTCGGCGTCGGTCAGCGTGAGGGTAGCACGGAagcgccaggccatcatcgccatccagccctatccgacccaggccccacagacgcaggatctcaacccgcaggcatgcatcaaccagaccctcgacatcaaggaaactggtt        <  8:272446‑M2/149‑112 (MQ=255)                                                                                                                                               tGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAagcgccaggccatcatcgccatccagccctatccgacccaggccccacagccgctggttctcaacccgcaggcctggatcacccagacccgcgacatcaaggaaactggttg       <  6:283890‑M2/149‑113 (MQ=255)                                                                                                                                                ggCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGac       >  4:366736/1‑148 (MQ=255)                                                                                                                                                 gcgcTtccgtgctacccgcacgctgaccgacgccgagcgccaggccatcatcgccatccagccctatccgacccaggccccacagccgctggttctcaacccgcaggcctggatcacccagacccgcgacatcaaggaaactggttg       <  4:2952‑M1/147‑143 (MQ=255)                                                                                                                                                 gcgcTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGac       <  4:95388/147‑1 (MQ=255)                                                                                                                                                   gcTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAagcgccaggccatcatcgccatccagccctatccgacccaggccccacagccgctggttctcaacccgcaggcctggatcacccagacccgcgacatcaaggaaactggttggcaa   >  5:283890‑M2/1‑33 (MQ=255)                                                                                                                                                   gcTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGaccac    >  1:202324/1‑148 (MQ=255)                                                                                                                                                    cTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTGCGGCCCCACAGGGTTTCGGTGTGGTCAAAGTCGATCTCGaccacac  <  8:296339/149‑3 (MQ=255)                                                                                                                                                     |                                                                                                                                                    ATCAACCAGCGTGCGCGGGGCGAGGATGCTGACTTGCCAACCAGTTTCCTTGATGTCGCGGGTCTGGGTGATCCAGGCCTGCGGGTTGAGAACCAGCGGCTGTGGGGCCTGGGTCGGATAGGGCTGGATGGCGATGATGGCCTGGCGCTCGGCGTCGGTCAGCGTGCGGGTAGCACGGAAGCGCCAGTCGGGCCGCGAAGTCAGGATGACCACGCCATTGTGATCGGTCAGCAACAGCTGCTCGGGCGTACGGCCCCACAGGGTTTCGGTGTGGTCGAGATCGACTTTGACCACCA  >  NC_002947/318908‑319203

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.