New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1520999	76 (1.200)	5 (0.080)	5/252	NT	6.8%	coding (256/1353 nt)	murD	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
	?	NC_002947	= 1521021	64 (1.060)					coding (278/1353 nt)	murD	UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase

TCGCCGATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATGGCCGC  >  NC_002947/1520853‑1521144                                                                                                                                                        |                                                                                                                                                  tCGCCGATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCg                                                                                                                                                 <  8:94284/149‑1 (MQ=255)    ccGATACCCGCGAGCAGCAGCCGTAACTGGTAACCCTGCGCCGTGATTACCCGCAGGTGGATGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCAAG‑‑‑‑‑GCCAGGCCgggg                                                                                                                                              <  8:121957/149‑3 (MQ=255)     cGATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCt                                                                                                                                             >  3:35118/1‑149 (MQ=255)     cGATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTAAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCt                                                                                                                                             <  2:234703/149‑1 (MQ=255)     cGATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGAGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCt                                                                                                                                             >  5:169837/1‑149 (MQ=255)      gATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCtt                                                                                                                                            >  3:260272/1‑149 (MQ=255)      gATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCtt                                                                                                                                            <  4:360773/149‑1 (MQ=255)       aTACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTg                                                                                                                                           <  5:252085/149‑1 (MQ=255)          cccGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTgca                                                                                                                                         <  6:151971/148‑1 (MQ=255)          cccGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTgca                                                                                                                                         <  7:198822/148‑1 (MQ=255)          cccGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTgca                                                                                                                                         <  8:222385/148‑1 (MQ=255)          cccGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTgca                                                                                                                                         <  2:266322/148‑1 (MQ=255)          cccGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTgca                                                                                                                                         <  3:299242/148‑1 (MQ=255)           ccGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTgcag                                                                                                                                        >  6:184155/1‑148 (MQ=255)           ccGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTgc                                                                                                                                          >  2:225899/1‑146 (MQ=255)           ccGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTgc                                                                                                                                          <  1:225899/146‑1 (MQ=255)           ccGCGAGCAGCCGCCGCAACTGGAAACCCTGCGCCGAGATTACCCGCACGTGGAAGTGCGCTGAGGTGAACTGGACGTGCACTTCCTGTGCCGCGCCAACGACCTGTACGTGAGCCCCGGCCTCGCCTAG‑‑‑‑‑GCCACGCCGGCCTTgcag                                                                                                                                        >  2:176995/1‑148 (MQ=255)               gAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGC                                                                                                                                                   >  6:227632‑M1/1‑133 (MQ=255)               gAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGC                                                                                                                                                   <  5:227632‑M1/133‑1 (MQ=255)                   agcCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGcc                                                                                                                               <  5:184155/149‑1 (MQ=255)                          ggAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCgcgtg                                                                                                                        >  4:35118‑M2/1‑144 (MQ=255)                          ggAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCgcgtg                                                                                                                        <  3:352069‑M2/149‑6 (MQ=255)                              cTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCgcgtggcgt                                                                                                                    >  3:217318/1‑149 (MQ=255)                                ggAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCgcgtggcgtg                                                                                                                   >  6:232370/1‑148 (MQ=255)                                ggAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCgcgtggcgtg                                                                                                                   >  1:125570/1‑148 (MQ=255)                                 gAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCgcggcagcctgctgcaaggccggcgtggccaa                                                                                                                   <  7:68835‑M1/147‑33 (MQ=255)                                 gAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGAGCGCTGTGGTGAACTGGACGTGGACTTCCTGAGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGAGGCGTGaa                                                                                                                 >  7:326779/1‑149 (MQ=255)                                 gAAACCCTGCGCCGTGATTACCCGCAGCTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGaa                                                                                                                 <  2:230386/149‑1 (MQ=255)                                    aCCCTGCGCCGTGATTACGCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCgcgtggcgtg                                                                                                                   <  2:316012/144‑1 (MQ=255)                                    aCCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCgcgtggcgtg                                                                                                                   >  1:316012/1‑144 (MQ=255)                                      ccTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGt                                                                                                            <  2:125570/149‑1 (MQ=255)                                           gcCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGc                                                                                                       >  1:255663/1‑149 (MQ=255)                                              gTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGAc                                                                                                    <  5:156768/149‑1 (MQ=255)                                                gATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACa                                                                                                   >  5:395159/1‑148 (MQ=255)                                                  ttATCCGCATGTGGAAGTGCGCTGTGGTGAACTGGTCGTGGACTTCCTGTGCCGCGCCATCGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACTTa                                                                                                 <  8:326779/148‑1 (MQ=255)                                                     cccGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGc                                                                                             >  3:327674/1‑149 (MQ=255)                                                        gCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCACGCgcggcagcctgctgcaaggccggcgtggcc                                                                                                                     >  1:318717‑M1/1‑97 (MQ=255)                                                        gCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTGGCCACGCCACGCgcggcagcctgctgcaaggccggcgtggcc                                                                                                                     <  2:318717‑M1/127‑31 (MQ=255)                                                        gCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGTAGCTGTCTGGCGACATAGAGCTGt                                                                                          <  4:217318/149‑1 (MQ=255)                                                          aGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGttt                                                                                        <  8:88001/149‑1 (MQ=255)                                                               gAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGtt                                                                                         >  6:135452/1‑143 (MQ=255)                                                               gAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGtt                                                                                         <  5:135452/143‑1 (MQ=255)                                                                   tGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCAt                                                                               >  3:72967/1‑149 (MQ=255)                                                                     cgcTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGc                                                                             <  7:346193/149‑1 (MQ=255)                                                                       cTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGttt                                                                                        <  8:328189/136‑1 (MQ=255)                                                                       cTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGttt                                                                                        >  7:328189/1‑136 (MQ=255)                                                                                aCTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGcc                                                                    >  8:152617/1‑147 (MQ=255)                                                                                    gACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGt                                                              >  1:20965/1‑149 (MQ=255)                                                                                     aCGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGtt                                                             <  5:232370/149‑1 (MQ=255)                                                                                     aCGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGtt                                                             <  4:260272/149‑1 (MQ=255)                                                                                     aCGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGtt                                                             >  3:251483/1‑149 (MQ=255)                                                                                      cGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTTCCTCGCGTGGCGTGAAGCTGTCTGTCGACATAGAGCTTTTTGCTCGCCATGCCAAGGCGCCGATCGtt                                                             <  6:150364/148‑1 (MQ=255)                                                                                        tGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGc                                                           >  4:158840/1‑148 (MQ=255)                                                                                         ggACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTgcag                                                                                                                                        >  4:144628/1‑70 (MQ=255)                                                                                             ttCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAg                                                     >  3:55357/1‑149 (MQ=255)                                                                                                  gtgCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTTTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGt                                                 <  6:82559/148‑1 (MQ=255)                                                                                                  gtgCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGt                                                 >  5:82559/1‑148 (MQ=255)                                                                                                   tgCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGt                                                 <  4:327674/147‑1 (MQ=255)                                                                                                   tgCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTc                                               <  2:101897/149‑1 (MQ=255)                                                                                                     ccGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTcc                                              >  2:161751/1‑148 (MQ=255)                                                                                                       gcgcCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCgcggcagcctgctgcaaggccggcgtgg                                                                                                                       <  6:311288‑M1/73‑29 (MQ=255)                                                                                                       gcgcCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCgcggcagcctgctgcaaggccggcgtgg                                                                                                                       >  5:311288‑M1/1‑45 (MQ=255)                                                                                                        cgcCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACg                                          >  2:344217/1‑149 (MQ=255)                                                                                                            aaCGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCaa                                      <  4:55357/149‑1 (MQ=255)                                                                                                              cGAGCTGTACGTGAGGACCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATGGTTGCGATCAGTGGTTCCAACGCGAaga                                    <  1:176995/149‑1 (MQ=255)                                                                                                               gAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAagag                                   >  1:254806/1‑149 (MQ=255)                                                                                                                 gCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGc                                                           <  7:292987/123‑1 (MQ=255)                                                                                                                 gCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGc                                                           >  8:292987/1‑123 (MQ=255)                                                                                                                     tACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCAcc                               <  6:395159/147‑1 (MQ=255)                                                                                                                     tACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGt                             <  3:158840/149‑1 (MQ=255)                                                                                                                       cGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTc                            <  2:255663/148‑1 (MQ=255)                                                                                                                            gCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTgg                                                  >  4:366361/1‑121 (MQ=255)                                                                                                                            gCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTgg                                                  <  3:366361/121‑1 (MQ=255)                                                                                                                            aagccGGCGTGGCCAAG‑‑‑‑‑GCCAGGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCacgacg                      >  5:327318/4‑149 (MQ=255)                                                                                                                               ccGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTg                   <  4:251483/149‑1 (MQ=255)                                                                                                                               ccGGCCTGGCCATG‑‑‑‑‑GCCACGCCGGCCTTGCAGCACGCTGCCGCGCGTGGCCTGAAGCTGTCTGGCGACATAGAGATGTTTGCTCGCCATGACAAGCCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGCCGCTg                   >  4:234025/1‑149 (MQ=255)                                                                                                                                    ctggcctTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCgg              >  4:138444/1‑149 (MQ=255)                                                                                                                                     tggcctTG‑‑‑‑‑GCCACGCCGGCCTTGCAACAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGt             >  3:344934/1‑149 (MQ=255)                                                                                                                                        cctTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGa           >  4:366320/1‑148 (MQ=255)                                                                                                                                         ctTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGaaa         <  2:254806/149‑1 (MQ=255)                                                                                                                                         ctTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGaaa         >  6:48306/1‑149 (MQ=255)                                                                                                                                         ctTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCCCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGaaa         >  7:295797/1‑149 (MQ=255)                                                                                                                                          ttG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCgcgtggccaaggccaggccggggctcacgtacagctcgttggcgcggcacaggaagtccacgtccagttcaccacagcgcacttccacctgcgggtaatcacggcgcagggtttc          <  7:68835‑M2/147‑116 (MQ=255)                                                                                                                                            g‑‑‑‑‑gCCACGCCGGCCTTGCAGCAGGCTGCCGCgcgtggcgtggccaaggccaggccggggctcacgtacagctcgttggcgcggcacaggaagtccacgtccagttcaccacagcgcacttccacctgc                            <  2:318717‑M2/127‑98 (MQ=255)                                                                                                                                            g‑‑‑‑‑gCCACGCCGGCCTTGCAGCAGGCTGCCGCgcgtggcgtggccaaggccaggccggggctcacgtacagctcgttggcgcggcacaggaagtccacgtccagttcaccacagcgcacttccacctgc                            >  1:318717‑M2/1‑30 (MQ=255)                                                                                                                                                  gCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCTGTGAAATgg      <  4:352069/148‑1 (MQ=255)                                                                                                                                                   ccACGCCGGCCTTGCAGCAGGCTGCCGCgcgtggccaaggccaggccggggctcacgtacagctcgttggcgc                                                                                <  6:311288‑M2/73‑46 (MQ=255)                                                                                                                                                   ccACGCCGGCCTTGCAGCAGGCTGCCGCgcgtggccaaggccaggccggggctcacgtacagctcgttggcgc                                                                                >  5:311288‑M2/1‑28 (MQ=255)                                                                                                                                                   ccACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATGgcc    >  3:371141/1‑149 (MQ=255)                                                                                                                                                   ccACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATGgcc    >  7:191482/1‑149 (MQ=255)                                                                                                                                                   ccACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATGgcc    >  2:281789/1‑149 (MQ=255)                                                                                                                                                   ccACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATGgcc    >  1:96007/1‑149 (MQ=255)                                                                                                                                                    cACGCgcggcagcctgctgcaaggccggcgtggccaaggccaggccggggctcacgtacagctcgttggcgcggcacaggaagtccacgtccagttcaccacagcgcacttccacctgcgggtaatcacggcgcagggtttccagttcc   <  3:352069‑M1/149‑145 (MQ=255)                                                                                                                                                    cACGCgcggcagcctgctgcaaggccggcgtggccaaggccaggccggggctcacgtacagctcgttggcgcggcacaggaagtccacgtccagttcaccacagcgcacttccacctgcgggtaatcacggcgcagggtttccagttcc   >  4:35118‑M1/1‑5 (MQ=255)                                                                                                                                                     aCGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATGgccgc  >  7:85313/1‑149 (MQ=255)                                                                                                                                                        |                                                                                                                                                  TCGCCGATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATTACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGCCTGGCCTTG‑‑‑‑‑GCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCGCCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATGGCCGC  >  NC_002947/1520853‑1521144

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.