New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5652712 =	75 (1.180)	3 (0.050)	3/260	NT	3.7%	coding (188/330 nt)	PP_4961	lipoprotein
	?	NC_002947	5652749 =	85 (1.370)					coding (151/330 nt)	PP_4961	lipoprotein
Rejected: Frequency below/above cutoff threshold.

CCAGTCACGGTGCCTTGCAGCCCCGCCCAATCAGATCGTTGGTTGCCACCCAGTACACCAGGCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTGCAGCAGTGAGCATCCTGC  >  NC_002947/5652566‑5652860                                                                                                                                                    |                                                                                                                                                      ccAGTCACGGTGCCTTGCAGCCCCGCCCAATCAGATCGTTGGTTGCCACCCAGTACACCAGGCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACAcc                                                                                                                                                     >  8:81325/1‑149 (MQ=255)  agcgcttttggccgtgacggccctggcgacactggcaggatgctcactgctgcagccggcgcaaccggccccggcagacaactggacccgttgggtctgcgccacccaggctgaggtgctttggcgcttcgccgatgcgcaacgtgAc                                                                                                                                                      <  3:213526‑M1/2‑1 (MQ=255)   aGTCACGGTGCCTTGCAGCCCCGCCCAATCAGATCGTTGGTTGCCACCCAGTACACCAGGCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTg                                                                                                                                                   >  6:101496/1‑149 (MQ=255)    gTCACGGTGCCTTGCAGCCCCGCCCAATCAGATCGTTGGTTGCCACCCAGTACACCAGGCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATACCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTgg                                                                                                                                                  >  7:279079/1‑149 (MQ=255)       aCGGTGCCTTGCAGCCCCGCCCAATCAGATCGTTGGTTGCCACCCAGTACACCAGGCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGACGCACCCGGTTCACCCTTGATCCGGT‑ACACCTGGTcg                                                                                                                                               >  8:261326/1‑149 (MQ=255)        cGGTGCCTTGCAGCCCCGCCCAATCAGATCGTTGGTTGCCACCCAGTACACCAGGCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTcgc                                                                                                                                              >  5:226599/1‑149 (MQ=255)                               tCAGATCGTTGGTTGCCACCCAGTACACCAGGCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAAcc                                                                                                                      <  6:226599/149‑1 (MQ=255)                                  gATCGTTGGTTGCCACCCAGTACACCAGGCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTgg                                                                                                                   >  4:333938/1‑149 (MQ=255)                                   aTCGTTGGTTGCCACCCAGTACACCAGGCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATGCCATCTCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑Ggcg                                                                                                                                <  8:297340/135‑1 (MQ=255)                                   aTCGTTGGTTGCCACCCAGTACACCAGGCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑Ggcg                                                                                                                                >  7:297340/1‑135 (MQ=255)                                          gttgCCACCCAGTACACCAGGCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTg                                                                                                           >  4:143609/1‑149 (MQ=255)                                           ttgCCACCCAGTACACCAGGCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTgc                                                                                                          <  1:76413/149‑1 (MQ=255)                                           ttgCCACCCAGTACACCAGGCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTgc                                                                                                          >  1:187190/1‑149 (MQ=255)                                            ctcactgctgcagccggcgcaaccggccccggcagacaactggacccgttgggtctgcgacacccaggctgaggtgctttggcgcttcgccgatgcgcaacgtgACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTg                                                                                                           >  5:279473‑M1/105‑148 (MQ=255)                                               cACCCAGTACACCAGGCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCAt                                                                                                      >  1:59019/1‑149 (MQ=255)                                               cACCCAGTACACCAGGCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCAt                                                                                                      >  7:240185/1‑149 (MQ=255)                                                   cAGTACACCAGGCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGc                                                                                                  <  2:332841/149‑1 (MQ=255)                                                     gTACACCAGGCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCCCGTCAACCTGGTCACGTTGCGCATCGGCg                                                                                                 >  5:302019/1‑148 (MQ=255)                                                      cagccggcgcaaccggccccggcagacaactggacccgttgggtctgcgacacccaggctgaggtgctttggcgcttcgccgatgcgcaacgtgACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCa                                                                                                                >  7:310173‑M1/95‑133 (MQ=255)                                                      cagccggcgcaaccggccccggcagacaactggacccgttgggtctgcgacacccaggctgaggtgctttggcgcttcgccgatgcgcaacgtgACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCa                                                                                                                <  8:310173‑M1/39‑1 (MQ=255)                                                       acacCAGGCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAg                                                                                              >  5:386209/1‑149 (MQ=255)                                                        cacCAGCCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAgc                                                                                             <  7:261326/149‑1 (MQ=255)                                                         acCAGGCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCAt                                                                                                      >  6:137139/1‑139 (MQ=255)                                                         acCAGGCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCAt                                                                                                      <  5:137139/139‑1 (MQ=255)                                                         acCAGGCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAgcg                                                                                            <  8:162667/149‑1 (MQ=255)                                                         acCAGGCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAgcg                                                                                            >  2:150302/1‑149 (MQ=255)                                                           cAGGCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAgcgc                                                                                           >  6:375813/1‑148 (MQ=255)                                                             ggCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCa                                                                                         >  8:85539/1‑148 (MQ=255)                                                              gCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCa                                                                                         >  5:325066/1‑147 (MQ=255)                                                                cttcttCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAg                                                                                      >  5:28824/1‑148 (MQ=255)                                                                cttcttCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAg                                                                                      >  5:23296/1‑148 (MQ=255)                                                                cttcttCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGc                                                                                     >  4:37678/1‑149 (MQ=255)                                                                   cttcGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCAc                                                                                   <  5:11427/148‑1 (MQ=255)                                                                      cGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCt                                                                                 >  6:155179/1‑147 (MQ=255)                                                                       gCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTcgc                                                                                                                                              >  5:142790/1‑86 (MQ=255)                                                                       gCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTcgc                                                                                                                                              <  6:142790/86‑1 (MQ=255)                                                                             ggTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTgg                                                                         <  6:325066/148‑1 (MQ=255)                                                                             ggTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTg                                                                          <  6:131168/147‑1 (MQ=255)                                                                                gtgGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGgtgt                                                                     >  1:17426/1‑149 (MQ=255)                                                                                  ggAAGGCCAGCATGCCAGCGCTGTACAGCGCACGCGAGGCACCCTGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCg                                                                   <  7:63200/149‑1 (MQ=255)                                                                                   gAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCg                                                                   >  4:213526/1‑148 (MQ=255)                                                                                      ggCCAGCATGCCATCGCTCTACAGCGCACCCGAGGCACCCTGATCACCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTCGTCACGGTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGa                                                               <  8:296925/149‑1 (MQ=255)                                                                                        ccAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGAcc                                                             >  8:65543/1‑149 (MQ=255)                                                                                            cATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGtt                                                                                                            >  8:306506/1‑98 (MQ=255)                                                                                            cATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGtt                                                                                                            <  7:306506/98‑1 (MQ=255)                                                                                            cATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAAc                                                         <  7:65543/149‑1 (MQ=255)                                                                                              tGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACgg                                                       <  5:101496/149‑1 (MQ=255)                                                                                               gCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACggg                                                      >  4:310641/1‑149 (MQ=255)                                                                                                ccATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACggg                                                      <  7:81325/148‑1 (MQ=255)                                                                                                  aTCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGc                                                                  >  1:393377/1‑134 (MQ=255)                                                                                                  aTCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGc                                                                  <  2:393377/134‑1 (MQ=255)                                                                                                   tCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCa                                                  <  1:150302/149‑1 (MQ=255)                                                                                                     gCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAg                                                 <  2:187190/148‑1 (MQ=255)                                                                                                     gCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGt                                                >  2:200818/1‑149 (MQ=255)                                                                                                       tGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAg                                                                                      >  5:62300/1‑109 (MQ=255)                                                                                                       tGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAg                                                                                      <  6:62300/109‑1 (MQ=255)                                                                                                       tGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTg                                              >  2:368620/1‑149 (MQ=255)                                                                                                            aGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGc                                         >  6:16422/1‑149 (MQ=255)                                                                                                              cgcACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCg                                       <  6:386209/149‑1 (MQ=255)                                                                                                                cACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCggg                                     <  5:375813/149‑1 (MQ=255)                                                                                                                  cccGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGc                                   <  5:71965/149‑1 (MQ=255)                                                                                                                   ccGAGGCACCCGGTTCAGCCTTGAGCCGGTGACACCTGGTCGCCGCCGCCAA‑GCCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCCCAGACCCAAc                                                         >  1:234934/1‑127 (MQ=255)                                                                                                                   ccGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCATCCTGGTCACGTTGCGGATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTGGCAGACCCAAc                                                         <  2:234934/126‑1 (MQ=255)                                                                                                                   ccGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCCGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGcc                                  >  4:279771/1‑149 (MQ=255)                                                                                                                   ccGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCggg                                     <  3:275082/146‑1 (MQ=255)                                                                                                                   ccGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCggg                                     >  4:275082/1‑146 (MQ=255)                                                                                                                   ccGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGcc                                  >  5:48446/1‑149 (MQ=255)                                                                                                                      cggCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGt                               <  8:240185/148‑1 (MQ=255)                                                                                                                           cccGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAAGGGCGCACGTCACCCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCCCCTCAGCCGGGGTGTCGCAGCCCCACCGGGTCCAGTTGTCTGCCGGGGCCGGTTgcg                           >  1:75092/1‑149 (MQ=255)                                                                                                                           cccGGTTCAGCCTTGAGACGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTTgcgc                          >  1:282126/1‑149 (MQ=255)                                                                                                                            ccGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTTGCGcc                         >  2:112731/1‑149 (MQ=255)                                                                                                                             cGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTTGCGCCg                        >  5:79587/1‑149 (MQ=255)                                                                                                                                  cAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTg                    >  3:16880/1‑148 (MQ=255)                                                                                                                                  cAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGGGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTg                    <  3:333938/148‑1 (MQ=255)                                                                                                                                   aGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTgca                  <  3:143609/149‑1 (MQ=255)                                                                                                                                     ccTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCAAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTgcag                 >  5:204680/1‑148 (MQ=255)                                                                                                                                          aGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTGCAGCAGt             >  8:49821/1‑147 (MQ=255)                                                                                                                                          aGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTGCAGCAGTGa           <  6:28824/149‑1 (MQ=255)                                                                                                                                          aGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTGCAGCAGTGa           <  6:23296/149‑1 (MQ=255)                                                                                                                                           gCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTGCAGCAGTGAg          >  1:242954/1‑149 (MQ=255)                                                                                                                                           gCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTGCAGCAGTGAg          >  6:201322/1‑149 (MQ=255)                                                                                                                                              ggT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTGCAGCAGTGAGCAt       >  6:324314/1‑149 (MQ=255)                                                                                                                                               gT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTGAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCa                                                  <  2:335043/105‑1 (MQ=255)                                                                                                                                               gT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTGCAGCAGTGAGCATc      <  3:37678/149‑1 (MQ=255)                                                                                                                                                    ACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTGCAGCAGTGAGCATCCTGc  >  5:155179‑M1/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                      CCAGTCACGGTGCCTTGCAGCCCCGCCCAATCAGATCGTTGGTTGCCACCCAGTACACCAGGCCTTCTTCGCCCTTGGTGTGGAAGGCCAGCATGCCATCGCTGTACAGCGCACCCGAGGCACCCGGTTCAGCCTTGAGCCGGT‑ACACCTGGTCGCCGCCGCCAA‑GGCGCACGTCAACCTGGTCACGTTGCGCATCGGCGAAGCGCCAAAGCACCTCAGCCTGGGTGTCGCAGACCCAACGGGTCCAGTTGTCTGCCGGGGCCGGTTGCGCCGGCTGCAGCAGTGAGCATCCTGC  >  NC_002947/5652566‑5652860

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.