New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5874548 =	79 (1.240)	5 (0.090)	5/244	NT	7.0%	intergenic (‑40/+108)	PP_5148/ilvA‑II	membrane protein/threonine deaminase
	?	NC_002947	5874630 =	61 (1.050)					intergenic (‑122/+26)	PP_5148/ilvA‑II	membrane protein/threonine deaminase

CCCTGACGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTC  >  NC_002947/5874402‑5874694                                                                                                                                                   |                                                                                                                                                    cccTGACGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCttcttc                                                                                                                                                   >  6:377161/1‑149 (MQ=255) cccTGACGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCttcttc                                                                                                                                                   <  7:146918/149‑1 (MQ=255) cccTGACGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCttcttc                                                                                                                                                   >  8:146918/1‑149 (MQ=255)  tggcggggctgcaggtgccggaggacgaacgtcacctggtgccggcagcgctggccaagatcggttacccgtactgggacgagaccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTcg                                                                                                                                                  >  3:324802‑M1/146‑149 (MQ=255)  ccTGACGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTcg                                                                                                                                                  >  8:238913/1‑149 (MQ=255)   cTGACGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTcgc                                                                                                                                                 <  6:54773/149‑1 (MQ=255)   cTGACGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTcgc                                                                                                                                                 <  5:344505/149‑1 (MQ=255)    tGACGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTTAACTGGCATTTTGCGGTAGCTTCTTcgcg                                                                                                                                                >  2:65203/1‑149 (MQ=255)      aCGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTcgcg                                                                                                                                                <  3:15963/147‑1 (MQ=255)      aCGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTcgcg                                                                                                                                                <  7:52170/147‑1 (MQ=255)      aCGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTcgcg                                                                                                                                                <  7:57363/147‑1 (MQ=255)      aCGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTcgcg                                                                                                                                                >  8:52170/1‑147 (MQ=255)      aCGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCggg                                                                                                                                              <  3:111510/149‑1 (MQ=255)         gctgcaggtgccggaggacgaacgtcacctggtgccggcagcgctggccaagatcggttacccgtactgggacgagaccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTCGCGggcaa                                                                                                                                           <  7:57373‑M1/11‑3 (MQ=255)         gctgcaggtgccggaggacgaacggcacctggtgccggcagcgctggccaagatcggttacccgtactgggacgagaccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTCGCGGGCtt                                                                                                                                           >  3:214817‑M1/139‑149 (MQ=255)           gAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTAc                                                                                                                                         >  7:296429/1‑149 (MQ=255)               gcgcCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGc                                                                                                                                     <  4:144865/149‑1 (MQ=255)                 gcCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTc                                                                                                                                   >  2:302252/1‑149 (MQ=255)                   cAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCt                                                                                                                                 >  7:53484/1‑149 (MQ=255)                   cAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCt                                                                                                                                 <  7:67711/149‑1 (MQ=255)                       tCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGcc                                                                                                                              >  8:172201/1‑148 (MQ=255)                       tCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGcc                                                                                                                              >  6:67572/1‑148 (MQ=255)                       tCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCGGcc                                                                                                                              >  4:204651/1‑148 (MQ=255)                         cAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTcc                                                                                                                                  <  6:343989/142‑1 (MQ=255)                         cAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTcc                                                                                                                                  >  5:343989/1‑142 (MQ=255)                         cAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAg                                                                                                                           >  6:227448/1‑149 (MQ=255)                         cAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCATACCCCCTGCAGCCAAg                                                                                                                           >  1:192937/1‑149 (MQ=255)                          aGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAgg                                                                                                                          >  6:311675/1‑149 (MQ=255)                            aTCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACACGCTCCTGCCAAGGt                                                                                                                         >  6:272626/1‑148 (MQ=255)                                  aGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAg                                                                                                                  <  4:227465/149‑1 (MQ=255)                                         gggCGCCCACCAACACGTGCGCGGTGTCGATGATCTGCAGGCTCTAGAGCCGGGCCACGTGTTCCATCTCCCGGCCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTTCCCGGTCCTGCCAAGGTATCTCAGGCCTTGa                                                                                                           <  8:289494/149‑1 (MQ=255)                                          ggCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAg                                                                                                          >  6:162393/1‑149 (MQ=255)                                               ccAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTg                                                                                                     >  6:345084/1‑149 (MQ=255)                                               ccAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTg                                                                                                     >  2:269160/1‑149 (MQ=255)                                                 aGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTgcg                                                                                                   <  7:172201/149‑1 (MQ=255)                                                 aGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTgcg                                                                                                   <  4:105849/149‑1 (MQ=255)                                                     aCAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGt                                                                                               <  5:377161/149‑1 (MQ=255)                                                       agcagcGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTAc                                                                                             <  4:252275/149‑1 (MQ=255)                                                           gcgcGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCACGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCtgt                                                                                         <  3:68980/149‑1 (MQ=255)                                                                  ttacccgtactgggacgagaccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCg                                                                                  <  2:163325‑M1/68‑1 (MQ=255)                                                                   gCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCgg                                                                                 <  5:67572/149‑1 (MQ=255)                                                                      ccgtactgggacgagaccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTCGCGGGc                                                                                                                                             <  6:215725‑M1/9‑1 (MQ=255)                                                                      ccgtactgggacgagaccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTCGCGGGc                                                                                                                                             >  5:215725‑M1/78‑86 (MQ=255)                                                                      ccgtactgggacgagaccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCa                                                                              >  8:224418‑M1/78‑149 (MQ=255)                                                                       cgtactgggacgagaccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccctTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCaa                                                                             >  1:163325‑M1/77‑149 (MQ=255)                                                                           gtgCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGTGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGccc                                                                         >  4:344524/1‑149 (MQ=255)                                                                            tgCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGccc                                                                         <  8:296429/148‑1 (MQ=255)                                                                            tgCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGccc                                                                         <  7:238913/148‑1 (MQ=255)                                                                             gCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCcgc                                                                       >  7:64926/1‑149 (MQ=255)                                                                              cAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCcgc                                                                       <  8:53484/148‑1 (MQ=255)                                                                                 ggTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTAGCTGTGGGAGCGGGGAAGCCcgc‑gc                                                                    >  4:316724/1‑146 (MQ=255)                                                                                 ggTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCtgt                                                                                         <  1:347787/127‑1 (MQ=255)                                                                                 ggTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCtgt                                                                                         >  2:347787/1‑127 (MQ=255)                                                                                 ggTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑Gaaa                                                                  <  5:162393/149‑1 (MQ=255)                                                                                   tCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTTAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAgg                                                                <  1:65203/149‑1 (MQ=255)                                                                                   tCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAgg                                                                <  4:134989/149‑1 (MQ=255)                                                                                     ttGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGc                                                                               >  1:38548/1‑133 (MQ=255)                                                                                     ttGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGc                                                                               <  2:38548/133‑1 (MQ=255)                                                                                     accgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccccTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGc                                                              <  4:263561‑M1/87‑1 (MQ=255)                                                                                      ccgaaaacccggcctacaaactgttcctgggctgagcggctaagctagggctgatggccccTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGcc                                                             >  3:263561‑M1/62‑149 (MQ=255)                                                                                       gAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGcc                                                             <  5:227448/148‑1 (MQ=255)                                                                                       gAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGc                                                              <  5:311675/147‑1 (MQ=255)                                                                                       gAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCa                                                            >  2:63204/1‑149 (MQ=255)                                                                                         gCGTGGTCAGGTGTGCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATc                                                          <  3:37417/149‑1 (MQ=255)                                                                                          cgggggcAGGTGCTCCCTCTCTCGGTCCGCCTTACACTGGCAATTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCa                                                         <  7:348683/143‑1 (MQ=38)                                                                                          cGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCa                                                         >  8:372788/1‑149 (MQ=255)                                                                                                     gtTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAGCTTa                                              <  3:316724/149‑1 (MQ=255)                                                                                                      ttCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑Gaaa                                                                  <  3:242549/128‑1 (MQ=255)                                                                                                      ttCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑Gaaa                                                                  >  4:242549/1‑128 (MQ=255)                                                                                                      ttCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAGCTTa                                              <  5:345084/148‑1 (MQ=255)                                                                                                        ccATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAGCTTAGcc                                           >  4:146151/1‑149 (MQ=255)                                                                                                         cATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTAGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAGCTTAGCCg                                          >  2:240368/1‑149 (MQ=255)                                                                                                          aTCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAg                                                  >  5:84884/1‑140 (MQ=255)                                                                                                          aTCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAg                                                  <  6:84884/140‑1 (MQ=255)                                                                                                            ctctcGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAGCTTAGCCGCt                                        <  1:67773/148‑1 (MQ=255)                                                                                                            ctctcGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAGCTTAGCCGCt                                        >  2:67773/1‑148 (MQ=255)                                                                                                                   tcgtcCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGCTGAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCa                                 <  1:269160/149‑1 (MQ=255)                                                                                                                        cTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGaa                             >  7:103792/1‑147 (MQ=255)                                                                                                                         ttAAATTGGCATTTTGCGGTAGCTTCTTCTCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGACTGCGCAGTACCTGTGGGAGAGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAGCTTa                                              <  4:254445/129‑1 (MQ=255)                                                                                                                         ttAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAg                          >  7:151061/1‑149 (MQ=255)                                                                                                                         ttAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAg                          >  2:50910/1‑149 (MQ=255)                                                                                                                         ttAAAATGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCAAAGGTATATAAGTCATTGATGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGA‑GAAAGGGCCATCAGCCCTAGCTTa                                              >  3:254445/1‑129 (MQ=38)                                                                                                                           aaaCTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGt                         <  1:50910/148‑1 (MQ=255)                                                                                                                             aCTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTg                      <  1:302252/149‑1 (MQ=255)                                                                                                                             aCTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTg                      <  3:146151/149‑1 (MQ=255)                                                                                                                               tGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTg                      >  1:342327/1‑147 (MQ=255)                                                                                                                                ggCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGc                                                       >  7:224477/1‑113 (MQ=255)                                                                                                                                ggCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGc                                                       <  8:224477/113‑1 (MQ=255)                                                                                                                                 gCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTa                    <  7:372788/147‑1 (MQ=255)                                                                                                                                 gCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAgg                  >  5:224765/1‑149 (MQ=255)                                                                                                                                   aTTTTGTGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGcc                <  3:344524/149‑1 (MQ=255)                                                                                                                                      ttGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCgg              <  6:106813/148‑1 (MQ=255)                                                                                                                                          ggTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCGGGAACAGTTTGTAGGCCGGGtttt         >  8:50662/1‑149 (MQ=255)                                                                                                                                            tAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCg       >  3:58628/1‑149 (MQ=255)                                                                                                                                            tAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCg       <  6:224765/149‑1 (MQ=255)                                                                                                                                              gCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGt     <  1:349743/149‑1 (MQ=255)                                                                                                                                               cttcttCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCGATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGtc    <  5:272626/149‑1 (MQ=255)                                                                                                                                                ttcttcGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGtct   >  1:222437/1‑149 (MQ=255)                                                                                                                                                  cttcGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGGGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGtctc  <  4:314982/148‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                    CCCTGACGGCGAGCGCGCCAGGTCCAGATCGCCAGGCCCAGGGCGCCCAGAAACAGCAGCGCGGTGGCGATGATGTGCAGGGTCTTGAGCGTGGTCAGGTGTTCCATCTCTCGGTCGTCCTTAAACTGGCATTTTGCGGTAGCTTCTTCGCGGGCTTACCCGCTCCTGCCAAGGTATCTCAGGCCTTGAGGCCTGCGCAGTACCTGTGGGAGCGGGCAAGCCCGC‑GAAAGGGCCATCAGCCCTAGCTTAGCCGCTCAGCCCAGGAACAGTTTGTAGGCCGGGTTTTCGGTCTC  >  NC_002947/5874402‑5874694

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.