| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5914184 | 18 (0.280) | 7 (0.140) | 7/210 | NT | 31.7% | intergenic (+76/+77) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase |
| ? | NC_002947 | = 5914224 | 16 (0.320) | intergenic (+116/+37) | spuI/argA | glutamylpolyamine synthetase/amino acid N‑acetyltransferase | |||||
GCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACG‑CCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCC > NC_002947/5914041‑5914331 | gctaGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACG‑CCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAgg < 2:139978/146‑1 (MQ=255)gCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACG‑CCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAgg > 5:126198/1‑149 (MQ=255) agagTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACG‑CCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCg > 2:389355/1‑148 (MQ=255) gagTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACG‑CCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGaa < 6:201172/149‑1 (MQ=255) gTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACG‑CCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCacaggtaagtcacaggct > 5:248300‑M1/1‑131 (MQ=255) gCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACG‑CCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAg < 2:15000/149‑1 (MQ=255) cACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACGACCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCacaggtaagtcacaggcttcagcc > 1:305129‑M1/1‑125 (MQ=255) aCTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACG‑CCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCCCTCCCCCAGGGGAATTTCGAAGGCTGAAGcc > 3:35498/1‑149 (MQ=255) cTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAGACG‑CCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCt < 6:73152/149‑1 (MQ=255) gATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACG‑CCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCtgt < 1:389355/148‑1 (MQ=255) cGACCTCGAGTACATCTGGTACCTGCATACCGTGTAAACGAAAACG‑CCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGa < 2:343136/144‑1 (MQ=255) cGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACG‑CCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCtgtg < 3:139807/143‑1 (MQ=255) cGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACG‑CCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGa < 2:227073/144‑1 (MQ=255) cTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACG‑CCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCacaggtaagtcacaggcttcagccttcgaaattaccctgc < 2:305129‑M1/149‑41 (MQ=255) tCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACG‑CCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCtgt > 4:166140/1‑137 (MQ=255) gAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACG‑CCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgg > 6:126198‑M2/1‑146 (MQ=255) gAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACG‑CCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgg > 5:133171‑M2/1‑146 (MQ=255) aGTACAACTGGTACCTGCATACCGTGTAAACGAAAACG‑CCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCacaggtaagtcacaggcttcagccttcgaaattaccctgcggga < 6:210064‑M1/149‑45 (MQ=255) gTACAACTGGTACCTGCATACCGTGTAAACGAAAACG‑CCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCacaggtaagtcacaggcttcagccttcgaaattaccctgcgggag < 6:137608‑M1/149‑46 (MQ=255) cAACTGGTACCTGCATACCGTGTAAACGAAAACG‑CCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCacaggtaagtcacaggcttcagccttcgaaattaccctgcgggagcgg < 6:248300‑M1/149‑49 (MQ=255) aCTGGTACCTGCATACCGTGTAAACGAAAACG‑CCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCacaggtaagtcacaggcttcagccttcgaaattaccctgcgggagcgggc < 1:159288‑M1/149‑51 (MQ=255) cTGGTACCTGCATACCGTGTAAACGAAAACG‑CCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACGTACCTGTgggagcgggcg < 6:288558‑M2/149‑12 (MQ=255) gTACCTGCATACCGTGTAAACGAAAACG‑CCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgt > 1:261989‑M2/1‑135 (MQ=255) aaCGAAAACG‑CCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCGCTTAGCGGGCCCGGCCGGGCCCGGAGGGGTATTTGGAAGGGGGCAGGCGGGGGCGTACCGGGGGGCGGGGGTGTGGCGGGGGAGAGggcgggcg > 2:94543/1‑146 (MQ=255) cTCAAGGGCGGCGTTTTTGTTTGAGACCGGGGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGACGGCTGAAGCCTGTGACTAACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCtt < 5:288558/149‑1 (MQ=255) tctTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCg > 7:160977/1‑149 (MQ=255) aCGCCCGCTCCCacaggtaagtcacaggcttcagccttcgaaattaccctgcgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtac > 1:261989‑M1/1‑12 (MQ=255) cGCCCGCTCCCacaggtacgtcacaggcttcagccttcgaaattaccctgcgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtaccag < 6:288558‑M1/149‑139 (MQ=255) gCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtaccagt < 1:159288‑M2/149‑100 (MQ=255) gCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGcgccgc > 3:245395/1‑149 (MQ=255) gCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGcgccgc > 6:7639/1‑149 (MQ=255) ccGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtaccagttg < 6:248300‑M2/149‑102 (MQ=255) ccGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGccgccg > 1:227682/1‑149 (MQ=255) gCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTc > 5:258577/1‑107 (MQ=255) gCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTc < 6:258577/107‑1 (MQ=255) cTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtaccagttgtac < 6:137608‑M2/149‑105 (MQ=255) tCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtaccagttgtact < 6:210064‑M2/149‑106 (MQ=255) ccacaggtaagtcacaggcttcagccttcgaaattaccctgcgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtaccagttgtactc > 6:126198‑M1/1‑2 (MQ=255) ccacaggtaagtcacaggcttcagccttcgaaattaccctgcgggagcgggcgtgcccgcgaagagggcgacaccggtctcaaacaaaaacgccgcccttgaggggcggcgttttcgtttacacggtatgcaggtaccagttgtactc > 5:133171‑M1/1‑2 (MQ=255) ccGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGcc > 4:147378/1‑149 (MQ=255) | GCGAGCTGGAAGAGTTCGAGCACTCGATCTCCGACCTCGAGTACAACTGGTACCTGCATACCGTGTAAACGAAAACG‑CCGCCCCTCAAGGGCGGCGTTTTTGTTTGAGACCGGTGTCGCCCTCTTCGCGGGCACGCCCGCTCCCGCAGGGTAATTTCGAAGGCTGAAGCCTGTGACTTACCTGTGGGAGCGGGCGTGCCCGCGAAGAGGGCGGCCCAGGCTTACAGGGGCTTCTCGAAAATCTTCGAATTGCGCTGGTAGTTGTACAGCGAAGCCCGCGCCGCCGGCAGCC > NC_002947/5914041‑5914331 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |