New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 585897 =65 (1.020)4 (0.070) 4/250 NT 5.8% coding (874/1443 nt) PP_0496 sodium/alanine symporter
?NC_002947 585974 = 69 (1.160)coding (797/1443 nt) PP_0496 sodium/alanine symporter

GCCCGACAGCAAGATCAGCAAGGCGGTGCAGGTGCAGATCACGAAGGTGTCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTGAAGATGGTTTCCAGCATGGCTGGCACGTGTTCGATCTGGGTGCCGATCAC  >  NC_002947/585832‑586116
                                                                                                                                              |                                                                                                                                              
gCCCGACAGCAAGATCAGCAAGGCGGTGCAGGTGCAGATCACGAAGGTGTCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGt                                                                                                                                          >  1:226671/1‑149 (MQ=255)
gCCCGACAGCAAGATCAGCAAGGCGGTGCAGGTGCAGATCACGAAGGTGTCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGt                                                                                                                                          >  1:75/1‑149 (MQ=255)
 cccGACAGCAAGATCAGCAAGGCGGTGCAGGTGCAGATCACGAAGGTGTCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGtt                                                                                                                                         <  3:257457/149‑1 (MQ=255)
  ccGACAGCAAGATCAGCAAGGCGGTGCAGGTGCAGATCACGAAGGTGTCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTg                                                                                                                                        >  4:365183/1‑149 (MQ=255)
   gccggcctgctcggcagcgccatcgtcatgggcgtgaaacgtggcgtgttcgccaacgaagcAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTg                                                                                                                                        >  3:89303‑M1/63‑148 (MQ=255)
       aGCAAGATCAGCAAGGCGGTGCAGGTGCAGATCACGAAGGTGTCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGAGaa                                                                                                                                   >  2:370801/1‑149 (MQ=255)
         cAAGATCAGCAAGGCGGTGCAGGTGCAGATCACGAAGGTGTCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAaca                                                                                                                                 >  6:36361/1‑149 (MQ=255)
          tgctcggcagcgccatcgtcatgggcgtgaaacgtggcgtgttcgccaacgaagcAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCg                                                                                                                                     >  5:384351‑M1/56‑144 (MQ=255)
          tgctcggcagcgccatcgtcatgggcgtgaaacgtggcgtgttcgccaacgaagcAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCg                                                                                                                                     <  6:384351‑M1/89‑1 (MQ=255)
          aaGATCAGCAAGTCGGTGCAGGTGCAGATCACGAAGGTGTCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGTGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAacac                                                                                                                                >  4:266009/1‑149 (MQ=255)
          aaGATCAGCAAGGCGGTGCAGGTGCAGATCACGAAGGTGTCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAacac                                                                                                                                >  5:320409/1‑149 (MQ=255)
           aGATCAGCAAGGCGGTGCAGGTGCAGATCACGAAGGTGTCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACg                                                                                                                               <  4:173940/149‑1 (MQ=255)
           aGATCAGCAAGGCGGTGCAGGTGCAGATCACGAAGGTGTCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACg                                                                                                                               >  4:260379/1‑149 (MQ=255)
            gATCAGCAAGGCGGTGCAGGTGCAGATCACGAAGGTGTCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGc                                                                                                                              <  4:42537/149‑1 (MQ=255)
                 gCAAGGCGGTGCAGGTGCAGATCACGAAGGTGTCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGt                                                                                                                         >  4:280556/1‑149 (MQ=255)
                    aGGCGGTGCAGGTGCAGATCACGAAGGTGTCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTc                                                                                                                      <  8:322176/149‑1 (MQ=255)
                     ggCGGTGCAGGTGCAGATCACGAAGGTGTCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCa                                                                                                                     <  5:153721/149‑1 (MQ=255)
                        ggtgcaggtgcaGATCACGAAGGTGTCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGc                                                                                                                  >  7:195042/1‑149 (MQ=255)
                          tgcaggtgcagATCACGAAGGTGTCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGccc                                                                                                                <  2:61154/149‑1 (MQ=255)
                          tgcaggtgcagATCACGAAGGTGTCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGccc                                                                                                                <  2:226671/149‑1 (MQ=255)
                                   agATCACGAAGGTGTCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATg                                                                                                       >  6:390429/1‑149 (MQ=255)
                                   agATCACGAAGGTGTCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATg                                                                                                       >  5:101329/1‑149 (MQ=255)
                                   agATCACGAAGGTGTCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATg                                                                                                       <  2:149230/149‑1 (MQ=255)
                                   agATCACGAAGGTGTCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATg                                                                                                       <  6:101329/149‑1 (MQ=255)
                                         cGAAGGTGTCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTg                                                                                                 >  2:365209/1‑149 (MQ=255)
                                          gAAGGTGTCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGc                                                                                                >  6:55955/1‑149 (MQ=255)
                                           aaGGTGTCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGcc                                                                                               <  2:259207/149‑1 (MQ=255)
                                                 tCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAg                                                                                         >  1:219632/1‑149 (MQ=255)
                                                 tCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAg                                                                                         <  6:320409/149‑1 (MQ=255)
                                                   gAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGc                                                                                       <  7:23810/149‑1 (MQ=255)
                                                   gAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGc                                                                                       >  1:74949/1‑149 (MQ=255)
                                                   gAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGc                                                                                       >  1:375819/1‑149 (MQ=255)
                                                    aGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGcc                                                                                      >  8:323668/1‑149 (MQ=255)
                                                     cgccaacgaagcaggcctgggcagcgcgccgaacgtcgccgccgtggccgcggtgaaacacccgggcgcacagggcgtggtccaggcctGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCa                                                                                          >  5:384351‑M2/90‑144 (MQ=255)
                                                     cgccaacgaagcaggcctgggcagcgcgccgaacgtcgccgccgtggccgcggtgaaacacccgggcgcacagggcgtggtccaggcctGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCa                                                                                          <  6:384351‑M2/55‑1 (MQ=255)
                                                        caacgaagcaggcctgggcagcgcgccgaacgtcgccgccgtggccgcggtgaaacacccgggcgcacagggcgtggtccaggcctGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGc                                                                                   >  3:89303‑M2/87‑148 (MQ=255)
                                                         cacGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCGCAGGCCTGCTTCGTTGGCGACCACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCa                                                                                  >  1:128290/1‑148 (MQ=255)
                                                              tGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGcc                                                                            >  1:185647/1‑149 (MQ=255)
                                                              tGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGcc                                                                            >  4:98279/1‑149 (MQ=255)
                                                                aaGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCgg                                                                          <  7:132614/149‑1 (MQ=255)
                                                                  ggcctgggcagcgcgccgaacgtcgccgccgtggccgcggtgaaacacccgggcgcacagggcgtggtccaggcctGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGt                                                                        >  7:144345‑M2/77‑149 (MQ=255)
                                                                   GCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTc                                                                       <  6:260516‑M1/149‑1 (MQ=255)
                                                                     CTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCgg                                                                          <  6:53844‑M1/144‑1 (MQ=255)
                                                                     CTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCgg                                                                          >  5:53844‑M1/1‑144 (MQ=255)
                                                                          ccACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGcc                                                                 >  5:396185/1‑148 (MQ=255)
                                                                           cACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCg                                                                >  5:151679/1‑148 (MQ=255)
                                                                            aCGCCCTGTGTGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGaa                                                              <  3:266009/149‑1 (MQ=255)
                                                                             cGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAg                                                             <  3:280556/149‑1 (MQ=255)
                                                                              gCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAgg                                                            >  3:57923/1‑149 (MQ=255)
                                                                              gCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAgg                                                            >  2:191473/1‑149 (MQ=255)
                                                                                 cTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCg                                                                                     <  8:197115/121‑1 (MQ=255)
                                                                                 cTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCg                                                                                     >  7:197115/1‑121 (MQ=255)
                                                                                   gtgCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGctc                                                       >  5:17/1‑149 (MQ=255)
                                                                                   gtgCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGctc                                                       >  2:367045/1‑149 (MQ=255)
                                                                                    tgCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGctct                                                      <  1:365209/149‑1 (MQ=255)
                                                                                       gcCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTGa                                                   <  2:185647/149‑1 (MQ=255)
                                                                                       gcCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACCTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTg                                                    >  1:250955/1‑148 (MQ=255)
                                                                                         ccGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTg                                                    >  5:3380/1‑146 (MQ=255)
                                                                                          cGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTg                                                    >  1:179550/1‑145 (MQ=255)
                                                                                            ggTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTGAAGATg                                              <  2:128290/149‑1 (MQ=255)
                                                                                             gtgtTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTGAAGATgg                                             <  5:260516/149‑1 (MQ=255)
                                                                                                tttCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTGAAGATGGttt                                          >  7:249453/1‑149 (MQ=255)
                                                                                                tttCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTGAAGATGGttt                                          <  2:219632/149‑1 (MQ=255)
                                                                                                  tCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAATGCCGGGTCGAGGCCGAAGGCGCTCTTGAAGATGGTTTc                                         <  2:75/148‑1 (MQ=255)
                                                                                                    aCCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTGAAGATGGTTTCCa                                       <  3:98279/148‑1 (MQ=255)
                                                                                                    aCCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTGAAGATGGTTTCCAg                                      >  2:33519/1‑149 (MQ=255)
                                                                                                       gcgGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTGAAGATGGTTTCCAGCAt                                   <  5:36361/149‑1 (MQ=255)
                                                                                                       gcgGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTGAAGATGGTTTCCAGCAt                                   <  6:303035/149‑1 (MQ=255)
                                                                                                              cggcggCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGgc                                                           >  4:32734/1‑118 (MQ=255)
                                                                                                              cggcggCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGgc                                                           <  3:32734/118‑1 (MQ=255)
                                                                                                              cggcggCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTGAAGATGGTTTCCAGCAtggctggc                            <  6:3380/149‑1 (MQ=255)
                                                                                                              cggcggCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTGAAGATGGTTTCCAGCAtggctggc                            <  8:195042/149‑1 (MQ=255)
                                                                                                                    cgACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTGAAGATGGTTTCCAGCATGGCTGGCACgtgt                      >  5:384431/1‑149 (MQ=255)
                                                                                                                     gACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCg                                                                      >  1:136488/1‑100 (MQ=255)
                                                                                                                     gACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCg                                                                      <  2:136488/100‑1 (MQ=255)
                                                                                                                     gACGTTCGGCGCGCTGCCCAGGCCTGCTTCGGTGGCGAACACGCAACGTTTCACGCCCATCTCGATGGCGCTGCCGAGCAGGCCGTCAAACGCCTGGGCGAGGCCGAAGGCGCGCTTGAAGATGCTTTCCAGGATGGCTGGCACggggt                     <  2:333067/149‑5 (MQ=255)
                                                                                                                      aCGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTGAAGATGGTTTCCAGCATGGCTGGCACGTGTTc                    >  3:322043/1‑149 (MQ=255)
                                                                                                                            ggCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTGAAGATGGTTTCCAGCATGGCTGGCACGTGTTCGATCTg              <  7:357539/149‑1 (MQ=255)
                                                                                                                               gcgcTGCCCAGGCCTGCTTCGTTGGCGAACACGCCAAGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTGAAGATGGTTTCCAGCATGGCTGGCACTTGTTCGATCTGGGt           <  5:55955/149‑1 (MQ=255)
                                                                                                                                 gcTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTGAAGATGGTTTCCAGCATGGCTGGCACGTGTTCGATCTGGGTGc         <  7:323668/149‑1 (MQ=255)
                                                                                                                                  cTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTGAAGATGGTTTCCAGCATGGCTGGCACGTGTTCGATCTGGGTGcc        <  3:260379/149‑1 (MQ=255)
                                                                                                                                   tGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCAAAAAACGCCGGGTCGAGGGCGAAGGCGCTCTTGAAGATGGTTTCCAGCATGGCTGGCACGTGTTCGATCTGGGTGcc        >  1:320528/1‑148 (MQ=255)
                                                                                                                                     cccAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTg                                                    <  6:318507/102‑1 (MQ=255)
                                                                                                                                     cccAGGCCTGCTACGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTg                                                    >  5:318507/1‑102 (MQ=255)
                                                                                                                                      ccaggcctGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTGAAGATGGTTTCCAGCATGGCTGGCACGTGTTCGATCTGGGTGCCGATc    <  6:298507‑M2/141‑1 (MQ=255)
                                                                                                                                       caggcctGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTGAAGATGGTTTCCAGCATGGCTGGCACGTGTTCGATCTgg             >  6:135554‑M2/8‑139 (MQ=255)
                                                                                                                                       caggcctGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTGAAGATGGTTTCCAGCATGGCTGGCACGTGTTCGATCTgg             <  5:135554‑M2/132‑1 (MQ=255)
                                                                                                                                        aggcctGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTGAAGATGGTTTCCAGCATGGCTGGCACGTGTTCGATCTGGGTGCCGATCAc  <  1:367045‑M2/143‑1 (MQ=255)
                                                                                                                                        aggcctGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTGAAGATGGTTTCCAGCATGGCTGGCACGTGTTCGATCTGGGTGCCGATCAc  <  8:180980‑M2/143‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                              
GCCCGACAGCAAGATCAGCAAGGCGGTGCAGGTGCAGATCACGAAGGTGTCGAGGAACACGCTGAAGGCCTGGACCACGCCCTGTGCGCCCGGGTGTTTCACCGCGGCCACGGCGGCGACGTTCGGCGCGCTGCCCAGGCCTGCTTCGTTGGCGAACACGCCACGTTTCACGCCCATGACGATGGCGCTGCCGAGCAGGCCGGCAAACGCCGGGTCGAGGCCGAAGGCGCTCTTGAAGATGGTTTCCAGCATGGCTGGCACGTGTTCGATCTGGGTGCCGATCAC  >  NC_002947/585832‑586116

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.