New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2410488	57 (0.900)	4 (0.060)	4/260	NT	6.6%	coding (960/2742 nt)	acnA‑I	aconitate hydratase
	?	NC_002947	= 2410555	57 (0.920)					coding (893/2742 nt)	acnA‑I	aconitate hydratase

TGCCTTGCAGTACTGCTCGACCAGTTGCACGGTCGCTTCGGGGCGGCCCGAGAGGCGCAGATAGTCCAGAGTGACTTGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGAT  >  NC_002947/2410410‑2410700                                                                                                                                                  |                                                                                                                                                  tgCCTTGCAGTACTGCTCGACCAGTTGCACGGTCGCTTCGGGGCGGCCCGAGAGGCGCAGATAGTCCAGAGTGACTTGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGc                                                                                                                                                  >  6:246040‑M2/1‑146 (MQ=255)   ccTTGCAGTACTGCTCGACCAGTTGCACGGTCGCTTCGGGGCGGCCCGAGAGGCGCAGATAGTCCAGAGTGACTTGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAgg                                                                                                                                              <  4:212561/149‑1 (MQ=255)       gCAGTACTGCTCGACCAGTTGCACGGTCGCTTCGGGGCGGCCCGAGAGGCGCAGATAGTCCAGAGTGACTTGGTCGACCGGGAAGAAACCACAGGTTGCGACGTATTCCGGTGCCCTGTTGGCGATGGTTGCGCGTTAGGCCAGGGGc                                                                                                                                           >  4:219466/1‑148 (MQ=255)       gCAGTACTGCTCGACCAGTTGCACGGTCGCTTCGGGGCGGCCCGAGAGGCGCAGATAGTCCAGAGTGACTTGGTCGACC‑GGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGc                                                                                                                                           <  3:183163/147‑1 (MQ=255)               gCTCGACCAGTTGCACGGTCGCTTCGGGGCGGCCCGAGAGGCGCAGATAGTCCAGAGTGACTTGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGc                                                                                                                                   >  5:120391/1‑148 (MQ=255)                   gACCAGTTGCACGGTCGCTTCGGGGCGGCCCGAGAGGCGCAGATAGTCCAGAGTGACTTGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAg                                                                                                                                <  2:231062/147‑1 (MQ=255)                       aGTTGCACGGTCGCTTCGGGGCGGCCCGAGAGGCGCAGATAGTCCAGAGTGACTTGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTc                                                                                                                          >  3:225118/1‑149 (MQ=255)                        gTTGCACGGTCGCTTCGGGGCGGCCCGAGAGGCGCAGATAGTCCAGAGTGACTTGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTcc                                                                                                                         >  8:63585/1‑149 (MQ=255)                            cACGGTCGCTTCGGGGCGGTCCGAGAGGCGCAGATAGTCCAGAGTGACTTGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGt                                                                                                                     <  5:377530/149‑1 (MQ=255)                             aCGGTCGCTTCGGGGCGGCCCGAGAGGCGCAGATAGTCCAGAGTGACTTGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCg                                                                                                                      >  7:355298/1‑147 (MQ=255)                             aCGGTCGCTTCGGGGCGGCCCGAGAGGCGCAGATAGTCCAGAGTGACTTGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCg                                                                                                                      >  4:116112/1‑147 (MQ=255)                                gTCGCTTCGGGGCGGCCCGAGAGGCGCAGATAGTCCAGAGTGACTTGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGaa                                                                                                                 <  2:223067/149‑1 (MQ=255)                                        ggggCGGCCCGAGAGGCGCAGATAGTCCAGAGTGACTTGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTcgacga                                                                                                         <  1:211901/149‑1 (MQ=255)                                         gggCGGCCCGAGAGGCGCAGATAGTCCAGAGTGACTTGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGaa                                                                                                        <  8:235910/149‑1 (MQ=255)                                          ggcggcCCGAGAGGCGCAGATAGTCCAGAGTGACTTGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAAc                                                                                                       <  6:250099/149‑1 (MQ=255)                                          ggcggcCCGAGAGGCGCAGATAGTCCAGAGTGACTTGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAAc                                                                                                       <  5:400656/149‑1 (MQ=255)                                              gcCCGAGAGGCGCAGATAGTCCAGAGTGACTTGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGc                                                                                                   <  3:365984/149‑1 (MQ=255)                                                ccGAGAGGCGCAGATAGTCCAGAGTGACTTGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGccc                                                                                                 <  3:116112/149‑1 (MQ=255)                                                       gcgcAGATAGTCCAGAGTGACTTGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGc                                                                                          >  2:84404/1‑149 (MQ=255)                                                       gcgcAGATAGTCCAGAGTGACTTGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGc                                                                                          >  6:155482/1‑149 (MQ=255)                                                            gATAGTCCAGAGTGACTTGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTc                                                                                     <  8:338093/149‑1 (MQ=255)                                                                 tCCAGAGTGACTTGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCg                                                                                                                      <  8:27359/111‑1 (MQ=255)                                                                 tCCAGAGTGACTTGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTg                                                                                                    >  1:211305/1‑129 (MQ=255)                                                                 tCCAGAGTGACTTGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTg                                                                                                    <  2:211305/129‑1 (MQ=255)                                                                     gagTGACTTGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCgcag                                                                             >  3:48533/1‑148 (MQ=255)                                                                            ttGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGccaagtcactctggactatctgcgcctctcgggccgccccgaagcgaccgtgcaactggtcgagcagtactgcaagg                                                                      <  3:332239‑M2/148‑78 (MQ=255)                                                                             tGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGccaagtcactctggactatctgcgcctctcgggccgccccgaagcgaccgtgcaactggtcgag                                                                                   <  3:236269‑M2/134‑65 (MQ=255)                                                                             tGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGccaagtcactctggactatctgcgcctctcgggccgccccgaagcgaccgtgcaactggtcgag                                                                                   >  4:236269‑M2/1‑70 (MQ=255)                                                                                tCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCAc                                                                 >  5:239565/1‑149 (MQ=255)                                                                                    ccGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGt                                                              >  7:151214/1‑148 (MQ=255)                                                                                     cGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGt                                                              >  1:378617/1‑147 (MQ=255)                                                                                      gggAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAg                                                           >  6:381837/1‑149 (MQ=255)                                                                                       ggAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGc                                                          >  8:279213/1‑149 (MQ=255)                                                                                         aagaaACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGATGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCAc                                                        <  7:122423/149‑1 (MQ=255)                                                                                            aaaCCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGccaagtcactctggactatctgcgcctctcgggccgccccgaagcgaccgtgcaactggtcgagcagtactgcaaggcacagggcatgtggcgc                                                     >  4:332239‑M2/1‑55 (MQ=255)                                                                                              aCCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGt                                                   >  5:206963/1‑149 (MQ=255)                                                                                                cacaGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCa                                                 <  8:230924/149‑1 (MQ=255)                                                                                                 acaGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAg                                                >  4:359931/1‑149 (MQ=255)                                                                                                        gcgcCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAg                                          <  6:120391/148‑1 (MQ=255)                                                                                                        gcgcCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGt                                         <  2:378617/149‑1 (MQ=255)                                                                                                          gcCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGa                                       <  7:63585/149‑1 (MQ=255)                                                                                                          gcCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGa                                       >  7:299047/1‑149 (MQ=255)                                                                                                          gcCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGa                                       >  7:130182/1‑149 (MQ=255)                                                                                                          gcCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGACCCAGGTCAGTGGCAGTGa                                       >  2:75729/1‑149 (MQ=255)                                                                                                          gcCGTATTCCGGAGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGa                                       >  1:248996/1‑149 (MQ=255)                                                                                                            cGTATTCCGGAGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATg                                     <  2:248996/149‑1 (MQ=255)                                                                                                             gTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGc                                    <  8:355298/149‑1 (MQ=255)                                                                                                              tATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGcc                                   <  1:84404/149‑1 (MQ=255)                                                                                                              tATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGcc                                   >  5:280135/1‑149 (MQ=255)                                                                                                               aTTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCgcagc                                                                            <  2:94160/107‑1 (MQ=255)                                                                                                                ttCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCt                                 <  8:151214/149‑1 (MQ=255)                                                                                                                   cGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTccc                              >  4:98322/1‑149 (MQ=255)                                                                                                                        ccATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGc                         >  5:50530/1‑149 (MQ=255)                                                                                                                         cATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCt                        >  6:228351/1‑149 (MQ=255)                                                                                                                          aTGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCATCCCGCAGCtt                       >  6:132079/1‑149 (MQ=255)                                                                                                                               ggCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCg                   <  4:48533/148‑1 (MQ=255)                                                                                                                                gCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGt                 >  6:2817/1‑149 (MQ=255)                                                                                                                                gCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGt                 <  6:239565/149‑1 (MQ=255)                                                                                                                                       ttGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCtt           >  2:236131/1‑148 (MQ=255)                                                                                                                                         gcgcGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTg          >  4:94867/1‑147 (MQ=255)                                                                                                                                          cgcgGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCg                   <  5:261462/137‑1 (MQ=255)                                                                                                                                          cgcgGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGaa        <  1:236131/148‑1 (MQ=255)                                                                                                                                          cgcgGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGCTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCg                   >  6:261462/1‑137 (MQ=255)                                                                                                                                           gcgGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGCTGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGc      >  1:37324/1‑149 (MQ=255)                                                                                                                                           gcgGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGc      >  6:223487/1‑149 (MQ=255)                                                                                                                                               tCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGAt  <  7:184897/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                  TGCCTTGCAGTACTGCTCGACCAGTTGCACGGTCGCTTCGGGGCGGCCCGAGAGGCGCAGATAGTCCAGAGTGACTTGGTCGACCGGGAAGAAACCACAGGTGGCGCCGTATTCCGGTGCCATGTTGGCGATGGTTGCGCGGTCGGCCAGGGGCAACTCGGCCAGGCCGTCCCCGTAGAACTCGACGAACTTGCCCACCACGCCTTTCTTGCGCAGCATCTGTGTCACGGTCAGCACCAGGTCAGTGGCAGTGATGCCCTCCCGCAGCTTGCCGGTCAGCTTGAAGCCGAT  >  NC_002947/2410410‑2410700

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.