New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 241474446 (0.720)6 (0.100) 4/250 NT 11.4% intergenic (+286/‑59) PP_2114/PP_2115 transposase/hypothetical protein
?NC_002947 = 2414821 50 (0.840)coding (19/198 nt) PP_2115 hypothetical protein

CCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCC  >  NC_002947/2414675‑2414965
                                                                                                                                                  |                                                                                                                                                
ccAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCgc                                                                                                                                                >  1:27256‑M2/1‑147 (MQ=255)
   aaaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCgcaag                                                                                                                                             >  6:73871‑M2/1‑144 (MQ=255)
   aaaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCAACCTGGGGCCTCAGCGCTTGACGGGCCTCCATGCCCGTCACCTGCCTTCgcaag                                                                                                                                             <  6:170229‑M2/149‑6 (MQ=255)
   aaaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTAACACCGGCCTTTCTCCCGGCAGGACCCCGCCCAAGGCCCCATACAGGGGCCGCAGCCCATGACGGGCATCCCTGCCCGTCCCCAGCCGTCgca                                                                                                                                               <  4:154760‑M2/147‑4 (MQ=255)
         gCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGc                                                                                                                                       <  5:208485/149‑1 (MQ=32)
               cTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACACCCGCCATGCTCCCCGCACGACCGCGCCCAACGCCCCAACCAGGGGCCACAGCGCATGACGGGCATCCAAGCCCGTCACCAGCCGTAGCAAGGCCAGCggtagg                                                                                                                                 >  4:279017/1‑144 (MQ=11)
                     tcatcCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGcctcct                                                                                                                           <  2:232700/149‑1 (MQ=32)
                            gCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCCTCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTcg                                                                                                                    >  5:357483/1‑149 (MQ=17)
                              cccTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTcgc                                                                                                                   >  5:302626/1‑148 (MQ=32)
                                ctgcgctgcgCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaa                                                                                                                <  1:31240/149‑1 (MQ=32)
                                ctgcgctgcgCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaa                                                                                                                <  4:240575/149‑1 (MQ=32)
                                    gctgcgctCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatc                                                                                                            <  3:279017/149‑1 (MQ=32)
                                    gctgcgctCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatc                                                                                                            <  7:200856/149‑1 (MQ=32)
                                        cgctCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaaga                                                                                                        <  2:80976/149‑1 (MQ=32)
                                        cgctCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaaga                                                                                                        <  3:154760/149‑1 (MQ=32)
                                        cgctCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaag                                                                                                         <  5:73883/148‑1 (MQ=32)
                                             cGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaggatcaa                                                                                                    <  6:302626/148‑1 (MQ=17)
                                             cGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaag                                                                                                   <  2:362144/149‑1 (MQ=32)
                                              ggggTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGcctcct                                                                                                                           <  7:46634/124‑1 (MQ=32)
                                               gggTCCCCTCACTCCCGCCATGCTCCCGGCAGGACCGCGCCGAAGGCCCCAACCAGGGGCCGCAGCGCTTGACGGGCATGGATGCCCGTCACCAGCCGTAGCAAAGCCAGCGGTCGGCCTCCAGAACTCGCGaagaacaagataaaga                                                                                                  >  4:300116/1‑148 (MQ=11)
                                                    cccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATGGATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaag                                                                                             <  3:300116/148‑1 (MQ=17)
                                                    cccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaaga                                                                                            <  5:252915/149‑1 (MQ=32)
                                                      cTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagat                                                                                           >  4:289664/1‑148 (MQ=32)
                                                        cACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCgcaaggcctgagtgaggggaccccggagcgcagcgcaggggccggatgatgggagcg                                                                                         <  6:244880‑M2/148‑58 (MQ=255)
                                                         aCTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaag                                                                                       <  5:299113/149‑1 (MQ=32)
                                                         aCTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaa                                                                                        <  1:31480/148‑1 (MQ=32)
                                                          cTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatc                                                                                          >  6:148452/1‑145 (MQ=32)
                                                          cTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatc                                                                                          >  4:97310/1‑145 (MQ=32)
                                                           tCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaa                                                                                                    >  6:20597/1‑134 (MQ=32)
                                                           tCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaa                                                                                                    <  5:20597/134‑1 (MQ=32)
                                                           tCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCgcaaggccggagtgaggcgaccccggagcgcagcgcaggggccggatgatgggagcgcagc                                                                                     <  7:345423‑M2/149‑62 (MQ=255)
                                                           tCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCATCACCTGCCTTCgcaaggccggagtgaggggaccccggagcgcagcgcaggggccggatgatgggagcgcagc                                                                                     <  2:388603‑M2/149‑62 (MQ=255)
                                                             cGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTCCgcaaggccggagtgaggggaccccggagcgcagcgcaggggccggatgatgggagcgcagcgt                                                                                   <  8:217456‑M2/149‑64 (MQ=255)
                                                                ccTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCgcaaggccggagtgaggggaccccggagcgc                                                                                                                   >  7:123526‑M2/1‑83 (MQ=255)
                                                                ccTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaag                                                                                             <  8:185671/136‑1 (MQ=32)
                                                                ccTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaag                                                                                             >  7:185671/1‑136 (MQ=32)
                                                                 cTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagat                                                                               <  4:103014/149‑1 (MQ=32)
                                                                 cTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatc                                                                                    >  3:103014/1‑144 (MQ=32)
                                                                     cTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaaagat                                                                              >  1:40506/1‑142 (MQ=17)
                                                                     cTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatca                                                                                   <  2:40506/141‑1 (MQ=32)
                                                                      tCCCGGCAGGACCGCGCCGAAGGCCCCAAACTGGGGCCTCACCGCTTGACGGGCATCCATGCCCGTCACCTGCCATCGCAACGCCGCCGTTCGGGCTCCGGAAGTCGCCaagatcaagatcaagctcaagatcaagctcaagatcaag                                                                           >  6:56492/1‑148 (MQ=11)
                                                                        ccGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagat                                                                         >  6:221782/1‑148 (MQ=32)
                                                                          ggCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagat                                                                         >  8:99832/1‑146 (MQ=32)
                                                                          ggCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagat                                                                         <  7:99832/146‑1 (MQ=32)
                                                                                    cgcCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAATGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatc                                                            <  7:251207/149‑1 (MQ=17)
                                                                                       cGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaag                                                               <  5:357434/143‑1 (MQ=32)
                                                                                       cGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaag                                                               >  6:357434/1‑143 (MQ=32)
                                                                                                cATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatc                                                <  6:357483/149‑1 (MQ=40)
                                                                                                         gCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATGAAGATCTGGATCAAGATCAcgatcaagatcaagatggagatc                                          >  6:171610/1‑146 (MQ=14)
                                                                                                                   gtGACGGGCATGGATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAagatcaagatcaagatcgagatcaagatcaagatc                              >  5:389996/2‑148 (MQ=255)
                                                                                                                     gACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAagatcaagatcaagatcgagatcaagatcaagatc                              >  3:369375/1‑146 (MQ=255)
                                                                                                                        gggCATCCATGCCCGTCACCTGCCTTCgcaaggcctgagtgaggggaccccggagcgcagcgcaggggccggatgatgggagcgcagcgttttttggttactttttgtcgcgtttgacaaaaagtgactcgccgtaagggcgaaaaggt                        >  5:244880‑M2/1‑27 (MQ=255)
                                                                                                                          gCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAgatcaagatcgagatcaagatcaagatcgagatcaa                      <  3:289664/149‑1 (MQ=255)
                                                                                                                          gCATCCATGCCCGTCACCTGCCTTAGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAATATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAgatcaagatcgagatcaagatcaagatcgagatcaa                      <  5:170229/149‑1 (MQ=255)
                                                                                                                               gaTGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAagatcaagatcaagatcgagatcaagatca                                   <  4:152853/130‑1 (MQ=255)
                                                                                                                               gaTGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAagatcaagatcaagatcgagatcaagatca                                   >  3:152853/2‑131 (MQ=255)
                                                                                                                               cATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAgcg                 >  6:40750/1‑149 (MQ=255)
                                                                                                                                 tGCCCGTCAGCTTCCTTCGCAAGGAATGCTTTCTTGCTCCTGAATTCGCGAAGATAAAGATGAAGATCAAGATCAAGATCAAGATCATGATCAAGATCAAGATCAATATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCt               <  1:368385/149‑1 (MQ=18)
                                                                                                                                 tGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCt               <  4:369375/149‑1 (MQ=255)
                                                                                                                                    ccGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTggg            <  6:389996/149‑1 (MQ=255)
                                                                                                                                          ccTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATAAAGATAAAGATCAAGATAAAGATCAAGATAAAGAACGAGATCAAGATCAACATCTAGATCAAGAGCGCTGGGTTTGa       >  1:121782/1‑148 (MQ=18)
                                                                                                                                             gCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGc   >  3:342817/1‑149 (MQ=255)
                                                                                                                                              ccTTCgcaaggccggagtgaggggaccccggagcgcagcgcaggggccggatgatgggagcgcagcgttttttggttactttttgtcgcgtttgacaaaaagtgactcgccgtaagggcgaaaaggtgagtcagtgtcgccatcgcgaa  >  1:388603‑M2/1‑5 (MQ=255)
                                                                                                                                              ccTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGcc  <  5:148452/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                
CCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCC  >  NC_002947/2414675‑2414965

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.