New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2870849 = | 52 (0.820) | 4 (0.070) | 4/252 | NT | 8.3% | intergenic (+156/‑374) | PP_2522/PP_2524 | transposase/HD domain‑containing protein |
? | NC_002947 | 2870889 = | 39 (0.650) | intergenic (+196/‑334) | PP_2522/PP_2524 | transposase/HD domain‑containing protein |
CGGGATCGTGGCGATCGTACCGGGGCAATTTACCGTATGCGTGTGGTCGCCAGAGCTGAATGCTGCGGGCAACTCCCTGGCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACCTGCTGTCAGCAAGGTGCTGTCGGTGATG > NC_002947/2870743‑2871036 | cGGGATCGTTGCGATCGTACCGGGGCAATTTACCGTATGCTTGTGGTCGCCAGAGCTGAATGCTGCGGGCAACTCCCTGGCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCTAACTCAg < 4:127804/149‑1 (MQ=255) aaatggacaacgccggatacccgctggtatggcagcccacgcagcgccacggccacgttggtatacgcgttctgacccgccaaggcgacgcctgattgcccctgAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAgg > 8:309757‑M1/105‑148 (MQ=255) gTGGCGATCGTACCGGGGCAATTTACCGTATGCGTGTGGTCGCCAGAGCTGAATGCTGCGGGCAACTCCCTGGCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCaa > 8:277003/1‑148 (MQ=255) gATCGTACCGGGGCAATTTACCGTATGCGTGTGGTCGCCAGAGCTGAATGCTGCGGGCAACTCCCTGGCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGc > 7:196273/1‑149 (MQ=255) gATCGTACCGGGGAAATTTACCGTATGCGTTTGGGAGCCAGAGCTGAATGCTGCGGGCAACTCCCTGGCCGTGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGc < 2:356703/149‑1 (MQ=255) gTACCGGGGCAATTTACCGTATGCGCGTGGTCGCCAGAGCTGAATGCTGCGGGCAACTCCCTGGCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCg < 1:306495/149‑1 (MQ=255) gggCAATTTACCGTATGCGTGTGGTCGCCAGAGCTGAATGCGGCGGGCAACTCCCTGGCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGAGCAGCGAACTCAGGGGCAATCAGGCGTCGCCTggg > 3:234137/1‑149 (MQ=255) ccgctggtatggcagcccacgcagcgccacggccacgttggtatacgcgttctgacccgccaaggcgacgcctgattgcccctgAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAg > 5:288018‑M1/85‑127 (MQ=255) ccgctggtatggcagcccacgcagcgccacggccacgttggtatacgcgttctgacccgccaaggcgacgcctgattgcccctgAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAg < 6:288018‑M1/43‑1 (MQ=255) aTTTACCGTATGCGTGTGGTCGCCAGAGCTGAATGCTGCGGGCAACTCCCTGGCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGt < 6:7596/149‑1 (MQ=255) tATGCGTGTGGTCGCCAGAGCTGAATGCTGCGGGCAACTCCCTGGCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAAcgc < 4:367093/149‑1 (MQ=255) tGCGTGTGGTCGCCAGAGCTGAATGCTGCGGGCAACTCCCTGGCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAAcgcg < 1:73623/148‑1 (MQ=255) gCGTGTGGTCGCCAGAGCTGAATGCTGCGGGCAACTCCCTGGCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGt < 6:208861/148‑1 (MQ=255) cGTGTGGTCGCCAGAGCTGAATGCTGCGGGCAACTCCCTGGCCGGGATGGCTGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGta < 5:16103/148‑1 (MQ=255) cGTGTGGTCGCCAGAGCTGAATGCTGCGGGCAACTCCCTGGCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGta < 4:374543/148‑1 (MQ=255) tgtgGTCGCCAGAGCTGAATGCTGCGGGCAACTCCCTGGCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCGGGCGTCGCCTTGGCGGGTCAGAACGCGTATAc > 1:149970/1‑149 (MQ=255) gCCAGAGCTGAATGCTGCGGGCAACTCCCTGGCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAAcgtg > 4:300696/1‑149 (MQ=255) gCCAGAGCTGAATGCTGCGGGCAACTCCCTGGCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAAcgtg < 1:373932/149‑1 (MQ=255) agagCTGAATGCTGCGGGCAACTCCCTGGCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAAcgtggcc < 3:300696/149‑1 (MQ=255) cTGAATGCTGCGGGCAACTCCCTGGCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAAcgtggccgtgg < 7:277003/149‑1 (MQ=255) ctgcGGGCAACTCCCTGGCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGc < 3:14637/148‑1 (MQ=255) tgcGGGCAACTCCCTGGCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACCTGGCCGTGGCGCTGCGt > 5:197028/1‑149 (MQ=255) cAACTCCCTGGCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTg > 5:10851/1‑149 (MQ=255) aaCTCCCTGGCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGc < 4:144277/149‑1 (MQ=255) aaCTCCCTGGCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGc > 1:7294/1‑149 (MQ=255) aCTCACTGGCCGGGATGGCGGCGCTTGAGATGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGcc < 7:309682/149‑1 (MQ=255) ccTGGCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATAc > 5:205210/1‑149 (MQ=255) cTGGCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCGGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATAcc < 2:149970/149‑1 (MQ=255) cTGGCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATAc > 5:295686/1‑148 (MQ=255) gCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTg > 7:174358/1‑134 (MQ=255) gCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTg < 8:174358/134‑1 (MQ=255) cGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCTGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCgg < 6:232760/149‑1 (MQ=255) ggATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGACGGTCGCTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGt < 8:80383/149‑1 (MQ=255) gcTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGtt < 8:196273/149‑1 (MQ=255) cTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCGGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTg > 6:9214/1‑149 (MQ=255) gAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTc > 3:265207/1‑148 (MQ=255) tgctCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGGCGCCTTGGCGGGTCAGACCGCGTATACCAACGTGGCCGTGGCCCTGCGGGGGCTGCCATACCAGCGGGGATCCGGCGTTGTCCAtt > 7:369216/1‑148 (MQ=255) cctgagttcgctgatcagaacaccgaccatccgatccgcgaactCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCAttt > 8:309757‑M2/45‑148 (MQ=255) ctgagttcgctgatcagaacaccgaccatccgatccgcgaactCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCgg > 5:288018‑M2/44‑127 (MQ=255) ctgagttcgctgatcagaacaccgaccatccgatccgcgaactCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCgg < 6:288018‑M2/84‑1 (MQ=255) ctCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTc > 4:302595/1‑149 (MQ=255) AGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGa < 2:355562‑M1/149‑1 (MQ=255) GTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGat > 6:10851‑M1/1‑149 (MQ=255) GCGGATCGGTTGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTTCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCAttt > 8:222091‑M1/1‑139 (MQ=255) GCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCAttt < 7:222091‑M1/139‑1 (MQ=255) ctgatcagaacaccgaccatccgatcctcgaactCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATAtctc < 7:309757‑M2/115‑1 (MQ=255) gatTGTCGGTGTGCTGATCAGCGAACTCAGGGGCACTCCGGCGGCGCCTTGGCGGGGCAGAACGCGTATACCAACGTGGCCGGGGCGCTGCGGGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCCCctg < 4:234137/149‑1 (MQ=255) tGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACctgct < 4:265207/149‑1 (MQ=255) gtgtTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTTGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACCTGCTGTCAGc < 3:58802/149‑1 (MQ=255) tgtTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGACGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACCTGCTGTCAGc > 1:249083/1‑148 (MQ=255) gtTCTGCTCCGAGACCTCAGGTGCCAGCTGTCGGCGCCGTGGCGGGGCAGAACGGGTATACAAACGTGGCCGGGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGGTGGCCATTTTCTGATATCTCGCACCTGCGGTCAGCaa < 8:369216/149‑1 (MQ=255) gATCAGCGATCTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACCTGCTGTCAGCAAGGTGc > 2:270761/1‑149 (MQ=255) aTCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACCTGCTGTCAGCAAGGTg < 6:205210/147‑1 (MQ=255) aTCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACCTGCTGTCAGCAAGGTGCt > 2:284333/1‑149 (MQ=255) gcgaactCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACCTGCTGTCAGCAAGGTGCTGTCg < 2:7294‑M2/142‑1 (MQ=255) tCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTGTTATATCTCGCACCTGCGGTCAGCGAGGTGCTGTCGGTGATg > 5:322344‑M2/2‑149 (MQ=255) tCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACCTGCTGTCAGCAAGGTGCTGTCGGTGATg > 4:228239‑M2/2‑149 (MQ=255) tCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACCTGCTGTCAGCAAGGTGCTGTCGGTGATg > 2:189709‑M2/2‑149 (MQ=255) | CGGGATCGTGGCGATCGTACCGGGGCAATTTACCGTATGCGTGTGGTCGCCAGAGCTGAATGCTGCGGGCAACTCCCTGGCCGGGATGGCGGCGCTTGAGCTGCTCAGTTCGCGGATCGGATGGTCGGTGTTCTGATCAGCGAACTCAGGGGCAATCAGGCGTCGCCTTGGCGGGTCAGAACGCGTATACCAACGTGGCCGTGGCGCTGCGTGGGCTGCCATACCAGCGGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACCTGCTGTCAGCAAGGTGCTGTCGGTGATG > NC_002947/2870743‑2871036 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |