New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5645143	70 (1.100)	3 (0.050)	3/258	NT	4.5%	coding (496/2184 nt)	PP_4954	membrane protein
	?	NC_002947	= 5645181	58 (0.940)					coding (534/2184 nt)	PP_4954	membrane protein
Rejected: Frequency below/above cutoff threshold.

ACCATGATCGGCGTGGACCAGCGCGGCGGCCAGGTCACCGACTTCTGGCACGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAG  >  NC_002947/5645035‑5645325                                                                                                                                                     |                                                                                                                                                  acCATGATCGGCGTGGACCAGCGCGGCGGCCAGGTCACCGACTTCTGGCACGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGgc                                                                                                                                                 <  6:57078‑M2/149‑3 (MQ=255) acCATGATCGGCGTGGACCAGCGCGGCGGCCAGGTCACCGACTTCTGGCACGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGgc                                                                                                                                                 <  3:169523‑M2/149‑3 (MQ=255)     tGATCGGCGTGGACCAGCGCGGCGGCCAGGTCACCGACTTCTGGCACGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGa                                                                                                                                             <  2:386930/149‑1 (MQ=255)      gATCGGCGTGGACCAGCGCGGCGGCCAGGTCACCGACTTCTGGCACGAACCGCTGCTGCTGGTGGCAGGTGTGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGAc                                                                                                                                            >  5:146643/1‑149 (MQ=255)       aTCGGCGTGGACCAGCGCGGCGGCCAGGTCACCGACTTCTGGCACGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGAc                                                                                                                                            <  2:34058/148‑1 (MQ=255)           gCGTGGACCAGCGCGGCGGCCAGGTCACCGACTTCTGGCACGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGttc                                                                                                                                       <  8:137940/149‑1 (MQ=255)              tGGACCAGCGCGGCGGCCAGGTCACCGACTTCTGGCACGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGttcttc                                                                                                                                    <  1:264374/149‑1 (MQ=255)                gACCAGCGCGGCGGCCAGGTCACCGACTTCTGGCACGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGttcttc                                                                                                                                    >  3:212974/1‑147 (MQ=255)                 aCCAGCGCGGCGGCCAGGTCACCGACTTCTGGCACGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAg                                                                                                                                 <  5:106606/149‑1 (MQ=255)                   cAGCGCGGCGGCCAGGTCACCGACTTCTGGCACGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCt                                                                                                                               >  3:360294/1‑149 (MQ=255)                           cggcCAGGTCACCGACTTCTGGCACGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCt                                                                                                                       <  7:81984/149‑1 (MQ=255)                             gcCAGGTCACCGACTTCTGGCACGAACCGCTGCTGCTGGTTGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTAc                                                                                                                     <  7:90975/149‑1 (MQ=255)                             gcCAGGTCACCGACTTCTGGCACGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTAc                                                                                                                     >  8:251334/1‑149 (MQ=255)                                aGGTCACCGACTTCTGGCACGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTg                                                                                                                  <  4:169523/149‑1 (MQ=255)                                   tCACCGACTTCTGGCACGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAg                                                                                                               <  5:308886/149‑1 (MQ=255)                                     aCCGACTTCTGGCACGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGa                                                                                                                 >  1:164080/1‑145 (MQ=255)                                     aCCGACTTCTGGCACGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGa                                                                                                                 <  2:164080/145‑1 (MQ=255)                                     aCCGACTTCTGGCACGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCt                                                                                                             >  7:83416/1‑149 (MQ=255)                                      ccGACTTCTGGCACGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCt                                                                                                             >  2:305072/1‑148 (MQ=255)                                       cGACTTCTGGCACGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTc                                                                                                            >  5:328887/1‑148 (MQ=255)                                        gACTTCTGGCACGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCaa                                                                                                          <  8:40964/149‑1 (MQ=255)                                              tGGCACGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTTGGTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑a                                                                                                    >  1:294944/1‑149 (MQ=255)                                              tGGCACGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGTCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑Ag                                                                                                   <  1:284036/149‑1 (MQ=255)                                                gCACGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCATGAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGc                                                                                                  <  1:305072/149‑1 (MQ=255)                                                gCACGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGACAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑Ag                                                                                                   <  1:278620/147‑1 (MQ=255)                                                  aCGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCaa                                                                                                          >  8:219984/1‑139 (MQ=255)                                                  aCGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCaa                                                                                                          <  7:219984/139‑1 (MQ=255)                                                  aCGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTg                                                                                               >  4:12841/1‑149 (MQ=255)                                                   cGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGt                                                                                              <  1:148053/149‑1 (MQ=255)                                                    gAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGtt                                                                                             <  6:328887/149‑1 (MQ=255)                                                    gAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGtt                                                                                             <  4:212974/149‑1 (MQ=255)                                                        cGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGaa                                                                                         <  8:83416/149‑1 (MQ=255)                                                        cGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGaa                                                                                         >  4:40771/1‑149 (MQ=255)                                                         gctgctgctGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAAc                                                                                        <  1:161978/149‑1 (MQ=255)                                                         gctgctgctGGTGGCAGGTGCGGCCTGGGACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAAc                                                                                        <  7:251334/149‑1 (MQ=255)                                                             ctgctgGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAACCGGt                                                                                    >  7:354839/1‑149 (MQ=255)                                                                            gCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGt                                                                     >  1:203969/1‑149 (MQ=255)                                                                               gCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCT‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGa                                                                  <  5:57078/149‑1 (MQ=255)                                                                               gCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGa                                                                  <  6:41492/149‑1 (MQ=255)                                                                               gCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGa                                                                  <  6:272874/149‑1 (MQ=255)                                                                               gCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGa                                                                  <  8:146048/149‑1 (MQ=255)                                                                               gCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGa                                                                  <  3:40771/149‑1 (MQ=255)                                                                                  tGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAgg                                                                >  1:292447/1‑148 (MQ=255)                                                                                   ggTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCa                                                              >  5:54506/1‑149 (MQ=255)                                                                                        gggCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGgcg                                                         >  6:300010/1‑149 (MQ=255)                                                                                         ggCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGgcgc                                                        <  4:360294/149‑1 (MQ=255)                                                                                          gCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTAAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGcc                                                       >  5:357245/1‑149 (MQ=255)                                                                                            tgtt‑gtCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTg                                                     <  8:354839/149‑1 (MQ=255)                                                                                                    ggTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTgg                                              <  5:280080/149‑1 (MQ=255)                                                                                                    ggTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTgg                                              <  2:294944/149‑1 (MQ=255)                                                                                                      tGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGgccacagcaccgacaacagcccgtaccaggccgcacctgccaccagcagcagcggttcgtgccagaagtcggagacctggccgccgcgctggtccacgccga                                             <  7:265550‑M2/149‑103 (MQ=255)                                                                                                         tgtgGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGgccacagcaccgacaacagcccgtaccaggccgcacctgccaccagcagcagcggttcgtgccagaagtcggt                                                                          <  6:314920‑M2/117‑74 (MQ=255)                                                                                                         tgtgGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGgccacagcaccgacaacagcccgtaccaggccgcacctgccaccagcagcagcggttcgtgccagaagtcggt                                                                          >  5:314920‑M2/1‑44 (MQ=255)                                                                                                           tgGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCcag                                         <  6:146643/147‑1 (MQ=255)                                                                                                           tgGCAGGCGCTGGTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCaagca                                       <  6:391857/149‑1 (MQ=255)                                                                                                                 gcgcTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACgg                                 <  2:203969/149‑1 (MQ=255)                                                                                                                  cgcTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACgg                                 >  1:224859/1‑148 (MQ=255)                                                                                                                     tGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAg                             >  8:21461/1‑149 (MQ=255)                                                                                                                          tCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCA‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCACAGCAGAACGGCAAggtcgt                        >  6:392548/1‑149 (MQ=255)                                                                                                                           ccAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGgtggtg                       >  4:215671/1‑149 (MQ=255)                                                                                                                               ccAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTgg                                              >  4:69276/1‑122 (MQ=255)                                                                                                                               ccAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTgg                                              <  3:69276/122‑1 (MQ=255)                                                                                                                                 aGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCcgcg                 >  1:115132/1‑149 (MQ=255)                                                                                                                                  gCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCgcgc                >  4:142168/1‑149 (MQ=255)                                                                                                                                       tACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCCGTGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGaa            >  1:112449/1‑149 (MQ=255)                                                                                                                                               gagCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTAAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCAGCGCTGAACGCAGcc     >  3:306246/1‑148 (MQ=255)                                                                                                                                                  ccTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAg  >  3:25511/1‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                                  ACCATGATCGGCGTGGACCAGCGCGGCGGCCAGGTCACCGACTTCTGGCACGAACCGCTGCTGCTGGTGGCAGGTGCGGCCTGGTACGGGCTGTT‑GTCGGTGCTGTGGCAGGCGCTGTTTTCCAACCAGCCGGTACAGCA‑GAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCC‑AGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAG  >  NC_002947/5645035‑5645325

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.