| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_002947 | 5,681,415 | +CGGG | 94.7% | intergenic (‑133/+71) | PP_4986 ← / ← PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5681415 | 2 (0.030) | 35 (0.570) +CGGG |
30/258 | NT | 94.7% | intergenic (‑133/+71) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein |
| ? | NC_002947 | 5681416 = | 2 (0.030) | intergenic (‑134/+70) | PP_4986/PP_4987 | hemolysin III family channel protein/putative Chemotaxis protein | |||||
CCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACC‑AAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGC > NC_002947/5681272‑5681557 | ccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggg < 5:339566‑M2/1‑1 (MQ=255) cgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcctgaaccgccggggc > 1:88952‑M2/148‑149 (MQ=255) cgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccggggc < 5:297689‑M2/2‑1 (MQ=255) cgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccggggc > 6:291635‑M2/148‑149 (MQ=255) cgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtagcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccggggc > 7:221879‑M2/148‑149 (MQ=255) taatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgcaggggctc > 5:190504‑M2/146‑148 (MQ=255) catgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCtgctgc < 3:78011‑M2/8‑1 (MQ=255) catgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTgcg > 4:353101‑M2/141‑149 (MQ=255) tgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCa < 3:353101‑M2/11‑1 (MQ=255) gcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccggggctgcgcagcag > 5:201277‑M2/138‑142 (MQ=255) aatcacatacgtcatgatgtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggtgcggccttgtgtcgcggaaggggcgcgaagcggccccaggctttcattgcctctgcatgaaccgccgggGCTGCTGCGCAGc < 4:42507‑M2/13‑1 (MQ=255) aaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatcgcttcgttctttgtgggagcggccttgtgtcgaggaaggggcgcgaagcggccccaggctttcattgccactgcatgaacccccgggGCTgcagcgcagc > 3:42507‑M2/136‑148 (MQ=255) acacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCGCAGCAgcccc < 6:201277‑M2/16‑2 (MQ=255) acacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttaattgcccctgcatgaaccgccgggGCTGCTGGGCCGccc > 3:120924‑M2/134‑148 (MQ=255) acagacctgctgcggttgggtgttttcctgttgtgattctgatggcttcgttctttgtgggagcggccttttgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCTCAGCCCTAt < 4:143575‑M2/18‑1 (MQ=255) acagacctcctgaggtgtgctggtttcctgttgtgatgctgatgggttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCGCAGcagccccgg < 4:48132‑M2/18‑4 (MQ=255) acctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcatttccacttcatgaaccgccgggGCTGCTGCGCAGCCCAATagc > 3:313615‑M2/128‑148 (MQ=255) cctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGa < 3:362017‑M2/23‑1 (MQ=255) cctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGa < 6:156482‑M2/23‑1 (MQ=255) cctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGacac < 3:107718‑M2/26‑1 (MQ=255) tgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCa > 2:98492‑M2/122‑132 (MQ=255) tgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCa < 1:98492‑M2/11‑1 (MQ=255) ggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccagggtttcattgccacagcatgaaccgcccggGCTGCTGCGCCGCCCAATACCGCCAAAAGGCCCCt > 2:268039‑M2/115‑149 (MQ=255) cctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGCCACAAGGCCCCACCCACTc > 8:280195‑M2/106‑147 (MQ=255) tcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGGTGCGCAGCCCTATCGCGACACAAGGCCGCGCCCACTCCAGCCCCCCAGGCCCTGCGCCt > 5:278675‑M2/85‑148 (MQ=255) ggagcggccttgtgtcgctaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGac < 1:59854‑M2/47‑1 (MQ=255) ggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGCCACAAGGCCCCGCCCACTCCAGac > 2:59854‑M2/73‑119 (MQ=255) ggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACC‑AAGGTc > 3:113554‑M2/68‑149 (MQ=255) cttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACC‑AAGGTCAgg > 8:232580‑M2/65‑149 (MQ=255) ttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACC‑AAGGTCAGGt > 8:50365‑M2/64‑149 (MQ=255) tgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACC‑AAGGTCAGGTTGc < 5:291635‑M2/89‑1 (MQ=255) gaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACC‑AAGGTCAGGTTGCAGATcc > 6:347456‑M2/55‑149 (MQ=255) ggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCt < 1:358609‑M2/72‑1 (MQ=255) gcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCCCCTACTAACC‑CAGGTCAGGGTGCAGATACGCGTCAGGc > 4:261654‑M2/46‑149 (MQ=255) agcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACC‑AAGGTCAGGTTGCAGAACCGCGTCACGCACCa < 7:280195‑M2/108‑1 (MQ=255) gcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACC‑AAGGTCAGGTTGCAGATCCGCGTCACGCACCAg < 7:232580‑M2/109‑1 (MQ=255) cccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACC‑AAGGTCAGGTTGc < 2:303230‑M2/89‑1 (MQ=255) cccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACC‑AAGGTCAGGTTGc > 1:303230‑M2/36‑124 (MQ=255) cccAGGCTTTCATTGCCACTGCATCAACCGCCGGGGCTGCGGCGCAGCCCTATCGGGACACAAGGCCGCTCCCACTCCAGACCACCACGCCCTGCGCCTCACATCCTAACCAAAGGTCAGGGGGCAGATCCGCGTCACGCACCAGccgt < 1:268039/149‑3 (MQ=255) tcattgctactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACC‑AAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGc < 7:352549‑M2/121‑1 (MQ=255) aTTGCCACTGCATGAACCGCCGGGGCTGCTGGGCAGCCCTATCGCGACACACGGCCGCTCCCCCTCCAGCCCCCCCGGCCCTGCGCCTCACCTCCTAACC‑ACGGGCAGGGTGGCGCTCCGCGTGCCGCCGCAGCCTTTGCAATGCGAcc > 2:261469/1‑149 (MQ=255) cactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGCCACAAGGCCGCTCCCACTCCCGCCCACCCGGCCCTGCGCCTCACATCCTAACC‑AAGGTCAGGTTGCAGATCCGCGTCACGCCCCCGCCGTTCCAAAGCGACCAGGTc > 7:334442‑M2/20‑149 (MQ=255) cactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACC‑AAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTc < 1:220502‑M2/130‑1 (MQ=255) tgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACAACCTAACC‑AAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTAcc > 5:158376‑M2/13‑149 (MQ=255) cgccgggGCTGCTGCGCAGCCCTATCGCGGCACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACC‑AAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCgcgc < 5:347456‑M2/142‑1 (MQ=255) | CCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACC‑AAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGC > NC_002947/5681272‑5681557 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |