New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5807871 =	69 (1.090)	3 (0.050)	3/252	NT	5.0%	intergenic (+6/+149)	mrcA/maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B
	?	NC_002947	5807917 =	48 (0.800)					intergenic (+52/+103)	mrcA/maeB	penicillin‑insensitive transglycosylase/penicillin‑sensitive transpeptidase/malic enzyme B

TCCGCCGTCGGTGGACGAACTGGGCAATGGCGCGGCACCGGGCAGCCCGCTGCCAGCCGATGAAGCGACGCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCGTTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTC  >  NC_002947/5807778‑5808065                                                                                                                                            |                                                                                                                                                     tcCGCCGTCGGTGGACGAACTGGGCAATGGCGCGGCACCGGGCAGCCCGCTGCCAGCCGATGAAGCGACGCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGccc                                                                                                                                             >  6:277023/1‑149 (MQ=255) tcCGCCGTCGGTGGACGAACTGGGCAATGGCGCGGCACCGGGCAGCCCGCTGCCAGCCGATGAAGCGACGCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGccc                                                                                                                                             >  7:84637/1‑149 (MQ=255)   cgccgTCGGTGGACGAACTGGGCAATGGCGCGGCACCGGGCAGCCCGCTGCCAGCCGATGAAGCGACGCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGcc                                                                                                                                              <  6:242690/146‑1 (MQ=255)   cgccgTCGGTGGACGAACTGGGCAATGGCGCGGCACCGGGCAGCCCGCTGCCAGCCGATGAAGCGACGCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGcc                                                                                                                                              <  5:2478/146‑1 (MQ=255)   cgccgTCGGTGGACGAACTGGGCAATGGCGCGGCACCGGGCAGCCCGCTGCCAGCCGATGAAGCGACGCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGcc                                                                                                                                              <  2:291700/146‑1 (MQ=255)    gccgTCGGTGGACGAACTGGGCAATGGCGCGGCACCGGGCAGCCCGCTGCCAGCCGATGAAGCGACGCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGa                                                                                                                                          <  8:301528/149‑1 (MQ=255)    gccgTCGGTGGACGAACTGGGCAATGGCGCGGCACCGGGCAGCCCGCTGCCAGCCGATGAAGCGACGCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGa                                                                                                                                          <  7:338469/149‑1 (MQ=255)     ccgTCGGTGGACGAACTGGGCAATGGCGCGGCACCGGGCAGCCCGCTGCCAGCCGATGAAGCGACGCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGAc                                                                                                                                         <  8:32784/149‑1 (MQ=255)          ggTGGACGAACTGGGCAATGGCGCGGCACCGGGCAGCCCGCTGCCAGCCGATGAAGCGACGCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAaca                                                                                                                                    <  7:234334/149‑1 (MQ=255)                 gAACTGGGCAATGGCGCGGCACCGGGCAGCCCGCTGCCAGCCGATGAAGCGACGCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCa                                                                                                                             <  3:310616/149‑1 (MQ=255)                 gAACTGGGCAATGGCGCGGCACCGGGCAGCCCGCTGCCAGCCGATGAAGCGACGCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCa                                                                                                                             <  3:240170/149‑1 (MQ=255)                   gctcgcatgagccggggcttttttatggggcttgggaatgtgtcagggctgcaaggtgttggtcagggcacttgtGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATTGGCGCca                                                                                                                                                      <  8:65575‑M1/47‑1 (MQ=255)                   gctcgcatgagccggggcttttttatggggcttgggaatgtgtcagggctgcaaggtgttggtcagggcacttgtGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATTGGCGCca                                                                                                                                                      >  7:65575‑M1/76‑122 (MQ=255)                         cAATGGCGCGGCACCGGGCAGCCCGCTGCCAGCCGATGAAGCGACGCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGa                                                                                                                      >  2:236625/1‑148 (MQ=255)                          aaTGGCGCGGCACCGGGCAGCCCGCTGCCAGCCGATGAAGCGACGCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGaca                                                                                                                    >  4:278465/1‑149 (MQ=255)                              gcgcGGCACCGGGCAGCCCGCTGCCAGCCGATGAAGCGACGCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACAtt                                                                                                                <  1:213388/149‑1 (MQ=255)                               cgcgGCACCGGGCAGCCCGCTGCCAGCCGATGAAGCGACGCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTc                                                                                                               <  6:88318/149‑1 (MQ=255)                                 tggCAGCGGGCTGCCCGGTGCCAGCCGATGAAGCGACGCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTcc                                                                                                              >  7:105563/2‑148 (MQ=255)                                         ggCAGCCCGCTGCCAGCCGATGAAGCGACGCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACAAACACCTAGCAGCCCTGACACATTCCCAAGCCCCa                                                                                                     >  4:46505/1‑149 (MQ=255)                                              cccGCTGCCAGCCGATGAAGCGACGCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGCCCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATaaa                                                                                                 >  3:354766/1‑148 (MQ=255)                                                cGCTGCCAGCCGATGAAGCGACGCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGTAGCCCTGACACATTCCCAAGCCCCATaaaaaa                                                                                              >  6:287178/1‑149 (MQ=255)                                                  cTGCCAGCCGATGAAGCGACGCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGc                                                                                            <  3:278465/149‑1 (MQ=255)                                                  cTGCCAGCCGATGAAGCGACGCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGc                                                                                            <  2:190742/149‑1 (MQ=255)                                                  cTGCCAGCCGATGAAGCGACGCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGc                                                                                            <  2:184812/149‑1 (MQ=255)                                                                     cGCCGATGGCTCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGTGAGCCgg                                                                         <  7:333449/149‑1 (MQ=255)                                                                     cGCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCgg                                                                         <  5:277023/149‑1 (MQ=255)                                                                      gCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCGACATAAAAATGCCCCGGCTCGCATGAGCCggg                                                                        <  6:71818/149‑1 (MQ=39)                                                                      gCCGATGAATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCggg                                                                        >  6:168005/1‑149 (MQ=255)                                                                         gATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAac                                                                                                                                     <  6:176039/85‑1 (MQ=255)                                                                          aTGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCtt                                                                    <  1:308205/149‑1 (MQ=255)                                                                              aTCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCtttt                                                                  <  6:350777/147‑1 (MQ=255)                                                                              aTCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCtttt                                                                  >  5:350777/1‑147 (MQ=255)                                                                               tCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTa                                                               >  4:308165/1‑149 (MQ=255)                                                                                  gTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCGCATGAGCCgggg                                                                       >  5:310863/1‑138 (MQ=255)                                                                                  gTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCGCATGAGCCgggg                                                                       <  6:310863/138‑1 (MQ=255)                                                                                  gTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGt                                                            >  1:159904/1‑149 (MQ=255)                                                                                   ttCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGCGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGTAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTc                                                           <  5:287178/149‑1 (MQ=255)                                                                                   ttCAAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTa                                                               <  1:236625/145‑1 (MQ=255)                                                                                     cTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGAGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGc                                                         >  3:175697/1‑149 (MQ=255)                                                                                      tAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCt                                                        >  1:278303/1‑149 (MQ=255)                                                                                        aGGCAGGGCGCCGGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTtg                                                      <  8:84637/149‑1 (MQ=255)                                                                                             tggcgccaatcagatcgagcgcccacgcaaaacctgagtcaggcgccACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGc                                                                            <  8:65575‑M2/75‑1 (MQ=255)                                                                                             tggcgccaatcagatcgagcgcccacgcaaaacctgagtcaggcgccACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGc                                                                            >  7:65575‑M2/48‑122 (MQ=255)                                                                                               gcgcctatcagatcgagcgcccacgcaaaacctgagtcaggcgccACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCaa                                                >  6:26984‑M2/46‑148 (MQ=255)                                                                                                 GCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAAt                                               <  5:142248‑M1/147‑1 (MQ=255)                                                                                                        tCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCGtt                                       >  3:303163/1‑148 (MQ=255)                                                                                                        tCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCGtt                                       >  3:190638/1‑148 (MQ=255)                                                                                                        tCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCGtt                                       >  5:368954/1‑148 (MQ=255)                                                                                                            gTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCa                                             >  5:269491/1‑138 (MQ=255)                                                                                                            gTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCa                                             <  6:269491/138‑1 (MQ=255)                                                                                                                 gCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCGTTGAACACTTc                              >  8:251220/1‑148 (MQ=255)                                                                                                                    tGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCGTTGAACACTTCATcc                          <  8:265708/149‑1 (MQ=255)                                                                                                                           tCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCGtt                                       <  6:99083/129‑1 (MQ=255)                                                                                                                           tCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCGtt                                       >  5:99083/1‑129 (MQ=255)                                                                                                                                   aTAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCGTTGAACACTTCATCCACGCTGGTCAGc              <  3:178516/146‑1 (MQ=255)                                                                                                                                      ggcgccACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTACCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCGTTGAACACTTCATCCACGCTGGTCAGCGGGTaa        <  6:368954‑M2/143‑1 (MQ=255)                                                                                                                                       gcgccACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCGTTGAACACTTCATCCACGCTGGTCAGCGGGTAAt       >  3:110646‑M2/6‑149 (MQ=255)                                                                                                                                         gccACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCGTTGAACACTTCATCCACGCTGGTCAGCGGGTAATGc     <  8:105563‑M2/146‑1 (MQ=255)                                                                                                                                         gccACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCGTTGAACACTTCATCCACGCTGGTCAGCGGGTAATGc     <  2:159904‑M2/146‑1 (MQ=255)                                                                                                                                           cACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCGTTGAaca                                  <  3:287437‑M2/117‑1 (MQ=255)                                                                                                                                           cACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCGTTGAaca                                  >  4:287437‑M2/2‑118 (MQ=255)                                                                                                                                            acaAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCATTTTTATGTCGCTTGCTGCAATCAGCCGTTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTc  >  4:132140/1‑149 (MQ=255)                                                                                                                                            |                                                                                                                                                     TCCGCCGTCGGTGGACGAACTGGGCAATGGCGCGGCACCGGGCAGCCCGCTGCCAGCCGATGAAGCGACGCCGATGGATCTGTTCTAAGGCAGGGCGCCTGACTCAGGTTTTGCGTGGGCGCTCGATCTGATAGGCGCCACAAGTGCCCTGACCAACACCTTGCAGCCCTGACACATTCCCAAGCCCCATAAAAAAGCCCCGGCTCATGCGAGCCGGGGCTTTTTTATGTCGCTTGCTGCAATCAGCCGTTGAACACTTCATCCACGCTGGTCAGCGGGTAATGCTTC  >  NC_002947/5807778‑5808065

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.