New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 591359782 (1.290)5 (0.080) 5/254 NT 6.3% coding (866/1377 nt) spuI glutamylpolyamine synthetase
?NC_002947 = 5913629 71 (1.170)coding (898/1377 nt) spuI glutamylpolyamine synthetase

CACCACCTTCATGGCCAAGCCCTATCCGGGCCAGGCAGGCAACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTGGGGCCTGGACAACCGCACCGTAGCGCTACGCGTACCGACCGGCTC  >  NC_002947/5913484‑5913774
                                                                                                                                                   |                                                                                                                                                   
caccacCTTCATGGCCAAGCCCTATCCGGGCCAGGCAGGCAACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCTGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGtgc                                                                                                                                                  >  8:78120‑M2/1‑146 (MQ=255)
 accaccTTCATGGCCAAGCCCTATCCGGGCCAGGCAGGCAACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGtgct                                                                                                                                                 <  4:34737‑M2/149‑5 (MQ=255)
  ccaccTTCATGGCCAAGCCCTATCCGGGCCAGGCAGGCAACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGtgctc                                                                                                                                                >  8:311217‑M2/1‑144 (MQ=255)
   caccTTCATGGCCAAGCCCTATCCGGGCCAGGCAGGCAACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGtgctc                                                                                                                                                <  4:84739‑M2/148‑6 (MQ=255)
   caccTTCATGGCCAAGCCCTATCCGGGCCAGGCAGGCAACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACAACTT‑‑CACCAGCGAGCATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGtgctc                                                                                                                                                <  7:215344‑M2/148‑6 (MQ=255)
    accTTCATGGCCAAGCCCTATCCGGGCCAGGCAGGCAACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCga                                                                                                                                              <  8:200341/149‑1 (MQ=255)
    accTTCATGGCCAAGCCCTATCCGGGCCAGGCAGGCAACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCga                                                                                                                                              <  1:260094/149‑1 (MQ=255)
    accTTCATGGCCAAGCCCTATCCGGGCCAGGCAGGCAACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCga                                                                                                                                              <  1:390576/149‑1 (MQ=255)
         cATGGCCAAGCCCTATCCGGGCCAGGCAGGCAACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGAcc                                                                                                                                          <  3:84433/148‑1 (MQ=255)
         cATGGCCAAGCCCTATCCGGGCCAGGCAGGCAACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGAcc                                                                                                                                          <  3:77712/148‑1 (MQ=255)
         cATGGCCAAGCCCTATCCGGGCCAGGCAGGCAACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGAcc                                                                                                                                          <  3:34737/148‑1 (MQ=255)
         cATGGCCAAGCCCTATCCGGGCCAGGCAGGCAACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGAcc                                                                                                                                          <  3:135179/148‑1 (MQ=255)
          aTGGCCAAGCCCTATCCGGGCCAGGCAGGCAACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTTTCCACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGAcc                                                                                                                                          <  1:117779/149‑1 (MQ=255)
              ccAAGCCCTATCCGGGCCAGGCAGGCAACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGccc                                                                                                                                    >  1:111556/1‑149 (MQ=255)
              ccAAGCCCTATCCGGGCCAGGCAGGCAACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGccc                                                                                                                                    >  6:79978/1‑149 (MQ=255)
               cAAGCCCTATCCGGGCCAGGCAGGCAACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCgaga                                                                                                                                            >  1:377958/1‑140 (MQ=255)
               cAAGCCCTATCCGGGCCAGGCAGGCAACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCgaga                                                                                                                                            <  2:377958/140‑1 (MQ=255)
               cAAGCCCTATCCGGGCCAGGCAGGCAACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCcg                                                                                                                                   >  3:44895/1‑149 (MQ=255)
               cAAGCCCTATCCGGGCCAGGCAGGCAACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCcg                                                                                                                                   >  6:389131/1‑149 (MQ=255)
                        tCCGGGCCAGGCAGGCAACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCAt                                                                                                                           <  3:382752/147‑1 (MQ=255)
                          cGGGCCAGGCAGGCAACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGcc                                                                                                                       >  6:36164/1‑149 (MQ=255)
                            ggCCAGGCAGGCAACGCCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGcctt                                                                                                                     <  6:178777/149‑1 (MQ=255)
                              ccAGGCAGGCAACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGccttcc                                                                                                                   >  7:267881/1‑149 (MQ=255)
                                 ggcaggcaACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCttt                                                                                                                <  3:264014/149‑1 (MQ=255)
                                  gcaggcaACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTg                                                                                                               >  7:368148/1‑149 (MQ=255)
                                      gcaACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCg                                                                                                           <  6:114884/149‑1 (MQ=255)
                                       caACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCTCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGa                                                                                                          <  4:234266/149‑1 (MQ=255)
                                       caACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCg                                                                                                           >  1:173707/1‑148 (MQ=255)
                                        aaCGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGaa                                                                                                         >  3:172204/1‑149 (MQ=255)
                                             ccTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGAGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTc                                                                                                     >  4:338107/1‑148 (MQ=255)
                                                 cACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTc                                                                                                <  1:378101/149‑1 (MQ=255)
                                                    gTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTa                                                                                             >  2:2485/1‑149 (MQ=255)
                                                     tGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTAc                                                                                           >  1:259844/1‑149 (MQ=255)
                                                       cacaTTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTAcc                                                                                          <  6:361189/148‑1 (MQ=255)
                                                           tttCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACcgccgc                                                                                     >  7:152935/1‑149 (MQ=255)
                                                              ccGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCtt                                                                                   <  3:84739/148‑1 (MQ=255)
                                                               cGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGc                                                                                                              >  5:111063/1‑121 (MQ=255)
                                                               cGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGc                                                                                                              <  6:111063/121‑1 (MQ=255)
                                                                 tGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGgc                                                                               <  8:267881/149‑1 (MQ=255)
                                                                 ggCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGgc                                                                               <  8:307107/148‑1 (MQ=255)
                                                                  gCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGgcg                                                                              >  2:27726/1‑149 (MQ=255)
                                                                      gACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGgcgcg                                                                            >  2:102274/1‑147 (MQ=255)
                                                                      gACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCa                                                                          <  3:379774/149‑1 (MQ=255)
                                                                         aaaGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGtt                                                                       >  1:342616/1‑149 (MQ=255)
                                                                         aaaGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGtt                                                                       >  2:140253/1‑149 (MQ=255)
                                                                         aaaGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGtt                                                                       >  4:196365/1‑149 (MQ=255)
                                                                         aaaGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGGCGGCGGTGTTCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCTCTTTGGCGCGCAGtt                                                                       <  2:247941/149‑1 (MQ=255)
                                                                           aGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCt                                                                     <  7:253087/149‑1 (MQ=255)
                                                                                  aacaacATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGcc                                                              >  5:324225/1‑149 (MQ=255)
                                                                                        aTCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAAcgc                                                        >  1:199614/1‑149 (MQ=255)
                                                                                        aTCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAAcgc                                                        >  2:146611/1‑149 (MQ=255)
                                                                                          cTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCCACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACgcgc                                                      >  8:335935/1‑149 (MQ=255)
                                                                                          cTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACgcgc                                                      >  2:294174/1‑149 (MQ=255)
                                                                                                aCCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAg                                                  <  1:2485/149‑1 (MQ=255)
                                                                                                 ccAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGc                                                 >  5:3145/1‑149 (MQ=255)
                                                                                                  cAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCACGCt                                                >  6:2834/1‑149 (MQ=255)
                                                                                                  cAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCt                                                >  8:156493/1‑149 (MQ=255)
                                                                                                   aGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTg                                               >  1:80222/1‑149 (MQ=255)
                                                                                                    gctaGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCGTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTgg                                              <  7:177716/146‑1 (MQ=255)
                                                                                                    gCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCa                                                                          >  3:292555/1‑121 (MQ=255)
                                                                                                    gCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCa                                                                          <  4:292555/121‑1 (MQ=255)
                                                                                                    gCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTgg                                              <  2:80222/149‑1 (MQ=255)
                                                                                                     cGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGCACGTCAACTCCTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTgcg                                             <  8:215344/149‑3 (MQ=255)
                                                                                                     cGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTggg                                             <  6:202493/149‑1 (MQ=255)
                                                                                                     cGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTggg                                             <  1:146611/149‑1 (MQ=255)
                                                                                                     cGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTggg                                             <  5:126159/149‑1 (MQ=255)
                                                                                                      gAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTgggg                                            >  4:117679/1‑149 (MQ=255)
                                                                                                       aGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGGGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTGGGGc                                           <  3:115963/149‑1 (MQ=255)
                                                                                                         gATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTGGGGCCt                                         <  5:79978/149‑1 (MQ=255)
                                                                                                          aTCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGtgctcgggatcctcgctggtgaagatgttgttgccatctttgtccagcacggaaatgtgcacgtgcaggccgttgcctgcctggcccggatagggcttgg                                                 >  6:117344‑M2/1‑42 (MQ=255)
                                                                                                          aTCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGtgctcgggatcctcgctggtgaagatgttgttgccatctttgtccagcacggaaatgtgcacgtgcaggccgttgcctgcctggcccggatagggcttgg                                                 <  5:117344‑M2/142‑101 (MQ=255)
                                                                                                          aTCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTGGGGCCTg                                        <  4:172204/149‑1 (MQ=255)
                                                                                                          aTCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTGGGGCCTg                                        <  2:259844/149‑1 (MQ=255)
                                                                                                             ccGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCCACTCGTACCCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTGGGGCCTGGa                                      <  1:102274/149‑1 (MQ=255)
                                                                                                             ccGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTGGGGCCTGGa                                      >  5:379006/1‑148 (MQ=255)
                                                                                                             ccGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTGGGGCCTGGa                                      <  1:294174/148‑1 (MQ=255)
                                                                                                              cGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGtgctcgggatcctcgctggtgaagatgttgttgccatctttgtccagcacggaaatgtgcacgtgcaggccgttgcctgcctggcccggatagggcttggccatgaaggtg                                      <  1:21143‑M2/149‑112 (MQ=255)
                                                                                                              cGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTGGGGCCTGGAc                                     >  7:349166/1‑148 (MQ=255)
                                                                                                                 gCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTGGGGCCTGGACAAcc                                 <  3:117679/149‑1 (MQ=255)
                                                                                                                  cAGAACGCCGCGCTACGTCACGCTGTCGGCGTTCtgctcgggatcctcgctggtgaagatgttgttgccatctttgtccagcacggaaatgtgcacgtgcaggccgttgcctgcctggcccggatagggcttggccatgaaggtggtgt                                  <  8:265723‑M2/149‑116 (MQ=255)
                                                                                                                  cAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTGGGGCCTGGACAACCg                                >  7:61383/1‑149 (MQ=255)
                                                                                                                    gAACGCCGCGCTACGTCACGCTGTCGGCGGTGtgctcgggatcctcgctggtgaagatgttgttgccatctttgtccagcacggaaatgtgcacgtgcaggccgttgcctgcctggcccggatagggcttggccatgaaggtggtgtcc                                >  2:21143‑M2/1‑32 (MQ=255)
                                                                                                                    gAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTGGGGCCTGGACAACCGCa                              <  2:199614/149‑1 (MQ=255)
                                                                                                                        gccgcGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTGGGGCCTGGACAACCGCACCg                           >  3:64890/1‑148 (MQ=255)
                                                                                                                           gcgcTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTGGGGCCTGGACAACCGCACCGTAgc                       <  5:389131/149‑1 (MQ=255)
                                                                                                                              cTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTGGGGCCTGGACAACCGCACCGTAGCGCt                    <  2:111556/149‑1 (MQ=255)
                                                                                                                                 cggcccGCTGGCGGCGGGGGGCTCGAGACCCGCCCCGCGTCCCTGGCCTTCCTTCGCCCGAACGTCAACTCGTCCCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTGGGGCCTGGACAACCGCACCGTAGCGCTAc                  <  8:349166/143‑1 (MQ=25)
                                                                                                                                 cGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTGGGGCCTGGACAACCGCACCGTAGCGCTAc                  <  8:60079/148‑1 (MQ=255)
                                                                                                                                  gTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTGGGGCCTGGACAACCGCACCGTAGCGCTAcgc                <  4:44895/149‑1 (MQ=255)
                                                                                                                                  gTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTGGGGCCTGGACAACCGCACCGTAGCGCTAcgc                <  1:27726/149‑1 (MQ=255)
                                                                                                                                     aCGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTGCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTGGGGCCTGGACAACCGCACCGTAGCGCTAcgcg               >  1:64743/1‑148 (MQ=255)
                                                                                                                                                ggTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTGGGGCCTGGACAACCGCACCGTAGCGCTACGCGTACCGACCGGCTc  <  2:64743/149‑1 (MQ=255)
                                                                                                                                                ggTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTGGGGCCTGGACAACCGCACCGTAGCGCTACGCGTACCGACCGGCTc  >  2:1025/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
CACCACCTTCATGGCCAAGCCCTATCCGGGCCAGGCAGGCAACGGCCTGCACGTGCACATTTCCGTGCTGGACAAAGATGGCAACAACATCTT‑‑CACCAGCGAGGATCCCGAGCAGAACGCCGCGCTACGTCACGCTGTCGGCGGTGTGCTCGAGACCCTGCCCGCGTCCATGGCCTTCCTTTGCCCGAACGTCAACTCGTACCGCCGCTTTGGCGCGCAGTTCTACGTGCCGAACGCGCCAAGCTGGGGCCTGGACAACCGCACCGTAGCGCTACGCGTACCGACCGGCTC  >  NC_002947/5913484‑5913774

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.