New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 605939247 (0.740)6 (0.100) 5/250 NT 11.5% coding (432/1404 nt) PP_5311 signal transduction protein
?NC_002947 = 6059413 48 (0.800)coding (453/1404 nt) PP_5311 signal transduction protein

CGCTGACCAGCTCGCCATGTCAGTACGAAAAGAGCCTGCTCGACGCTGAAACTGTCTTTATCCAGTCAGGCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCACTGCCCGACGCATTCAGAAACGCCTGGAAGAAACCATCGAAATTCCACCGCTCGCCGAC  >  NC_002947/6059268‑6059557
                                                                                                                                                 |                                                                                                                                                
cgcTGACCAGCTCGCCATGTCAGTACGAAAAGAGCCTGCTCGACGCTGAAACTGTCTTTATCCAGTCAGGCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCggc                                                                                                                                               >  1:280642‑M2/1‑146 (MQ=255)
   tGACCAGCTCGCCATGTCAGTACGAAAAGAGCCTGCTCGACGCTGAAACTGTCTTTATCCAGTCAGGCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCggccag                                                                                                                                            <  5:365534‑M2/149‑7 (MQ=255)
    gACCAGCTCGCCATGTCAGTACGAAAAGAGCCTGCTCGACGCTGAAACTGTCTTTATCCAGTCAGGCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCggccagc                                                                                                                                           >  1:130613‑M2/1‑142 (MQ=255)
     aCCAGCTCGCCATGTCAGTACGAAAAGAGCCTGCTCGACGCTGAAACTGTCTTTATCCAGTCAGGCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCggccagc                                                                                                                                           <  6:262932‑M2/148‑8 (MQ=255)
       cAGCTCGCCATGTCAGTACGAAAAGCGCCTGCTCGACGCTGAAACTGTCTTTATCCAGTCAGGCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAg                                                                                                                                        <  6:360988/149‑1 (MQ=255)
       cAGCTCGCCATGTCAGTACGAAAAGAGCCTGCTCGACGCTGAAACTGTCTTTATCCAGTCAGGCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAg                                                                                                                                        <  5:262932/149‑1 (MQ=255)
         gCTCGCCATGTCAGTACGAAAAGAGCCTGCTCGACGCTGAAACTGTCTTTATCCAGTCAGGCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGtt                                                                                                                                      <  2:308124/149‑1 (MQ=255)
             gCCATGTCAGTACGAAAAGAGCCTGCTCGACGCTGAAACTGTCTTTATCCAGTCAGGCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGaa                                                                                                                                   <  7:206879/148‑1 (MQ=255)
                 tGTCAGTACGAAAAGAGCCTGCTCGACGCTGAAACTGTCTTTATCCAGTCAGGCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCAt                                                                                                                              <  5:77648/149‑1 (MQ=255)
                     aGTACGAAAAGAGCCTGCTCGACGCTGAAACCGTCTTTATCCAGTCAGGCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGc                                                                                                                          >  4:297970/1‑149 (MQ=255)
                      gTACGAAAAGAGCCTGCTCGACGCTGAAACTGTCTTTATCCAGTCAGGCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAgac                                                                                                                         >  7:352167/1‑147 (MQ=255)
                               gagCCTGCTCGACGCTGAAACTGTCTTTATCCAGTCAGGCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAAtctc                                                                                                                 >  6:165172/1‑148 (MQ=255)
                               gagCCTGCTCGACGCTGAAACTGTCTTTATCCAGTCAGGCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCg                                                                                                                <  5:69699/149‑1 (MQ=255)
                                  ccTGCTCGACGCTGAAACTGTCTTTATCCAGTCAGGCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGCAGCCATCATCCCCAATCTCGAcc                                                                                                             >  6:187922/1‑149 (MQ=255)
                                  ccTGCTCGACGCTGAAACTGTCTTTATCCAGTCAGGCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCAAATCTCGAcc                                                                                                             >  4:319541/1‑149 (MQ=255)
                                         gACGCTGAAACTGTCTTTATCCAGTCAGGCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGcccc                                                                                                        <  5:165172/147‑1 (MQ=255)
                                             cTGAAACTGTCTTTATCCAGTCAGGCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATgac                                                                                                  <  3:67052/149‑1 (MQ=255)
                                              tGAAACTGTCTTTATCCAGTCAGGCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATgac                                                                                                  >  5:45088/1‑148 (MQ=255)
                                                aaaCTGTCTTTATCCAGTCAGGCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATgacga                                                                                                >  1:282664/1‑148 (MQ=255)
                                                  aCTGTCTTTATCCAGTCAGGCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGacac                                                                                             <  5:23623/149‑1 (MQ=255)
                                                        tttATCCAGTCAGGCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCggg                                                                                        >  3:346560/1‑148 (MQ=255)
                                                           aTCCAGTCAGGCGAAGTCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGaaa                                                                                     <  6:164094/148‑1 (MQ=255)
                                                             ccAGTCAGGCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCa                                                                                  >  5:11337/1‑149 (MQ=255)
                                                                 tCAGGCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGa                                                                              <  8:19987/149‑1 (MQ=255)
                                                                     gagAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCg                                                                          <  8:110920/147‑1 (MQ=255)
                                                                     gCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGcc                                                                                                                         <  6:77612/102‑1 (MQ=255)
                                                                     gCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGcc                                                                                                                         >  5:77612/1‑102 (MQ=255)
                                                                       gAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGt                                                                        >  5:166085/1‑149 (MQ=255)
                                                                           ccGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAg                                                                    <  6:45088/149‑1 (MQ=255)
                                                                             ggCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGc                                                                  >  3:199172/1‑149 (MQ=255)
                                                                             ggCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGc                                                                  <  6:11337/149‑1 (MQ=255)
                                                                                   ttGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCa                                                             <  4:172081/148‑1 (MQ=255)
                                                                                       tGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCACTGcc                                                        >  8:113803/1‑149 (MQ=255)
                                                                                         gAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCACTGccc                                                       >  3:288740/1‑148 (MQ=255)
                                                                                            aTCGAACGCGCACACTTCAAGCTCATGCTGGACAAGGACAGCGCCAGCTGGTTCGTCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCTGTCCAGGCCTTCACTGCCCTAc                                                    <  4:99529/148‑1 (MQ=255)
                                                                                                  cgcgCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCACTGCCCGACGCATTCa                                             <  4:179912/149‑1 (MQ=255)
                                                                                                        cacTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCACTGCCCGACGCATTCAGAAACg                                       >  4:50306/1‑149 (MQ=255)
                                                                                                         acTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCACTGccc                                                       >  7:328675/1‑132 (MQ=255)
                                                                                                         acTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCACTGccc                                                       <  8:328675/132‑1 (MQ=255)
                                                                                                         acTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCACTGCCCGACGCATTCAGAAACGc                                      >  1:350172/1‑149 (MQ=255)
                                                                                                           ttCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCggccagcatgcgcttgaagtgtgcgcgttcgatttccagcaacaggccggcttcgcctgactggataaagacagtttcagcgtcgagcaggctcttttcgtactgcca                                      <  1:339352‑M2/147‑109 (MQ=255)
                                                                                                           ttCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCACTGCCCGACGCATTCAGAAACGCCt                                    >  4:187852/1‑149 (MQ=255)
                                                                                                              aaGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCACTGCCCGACGCATTCAGAAACGCCTgg                                  <  2:282664/148‑1 (MQ=255)
                                                                                                              aaGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTGGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCACTGCCCGACGCATTCAGAAACGCCTGga                                 <  8:160175/149‑1 (MQ=255)
                                                                                                                gcgcATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCACTGCCCGACGCATTCAGAAACGCCTgg                                  >  3:86520/1‑146 (MQ=255)
                                                                                                                  tggcgCTGGCCTTGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGACGCCATCAGCCCCAATCTCGACCGCCCCGAGGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCCCTGCCCGACGCATTGAGAAACGCCTGgaaga                              >  5:282027/5‑148 (MQ=255)
                                                                                                                  gcATGCTGGCCAAGGCCAGCGCCAGCAGCTTCggccagcatgcgcttgaagtgtgcgcgttcgatttccagcaacaggccggcttcgcctgactggataaagacagtttcagcgtcgagcaggctcttttcgtactgacatggcgagct                             <  7:364698‑M2/149‑118 (MQ=255)
                                                                                                                  gcATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCACTGCCCGACGCATTCAGAAACGCCTGgaagaa                             <  4:199172/149‑1 (MQ=255)
                                                                                                                   cATGCTGGCCAAGGCCAGCGCCAGCAGCTTCggccagcatgcgcttgaagtgtgcgcgttcgatttccagcaacaggccggcttcgcctgactggataaagacagtttcagcgtcgagcaggctcttttcgtactgacatggcgagctg                            >  8:364698‑M2/1‑31 (MQ=255)
                                                                                                                   cATGCTGGCCAAGGCCAGCGCCAGCAGCTTCggccagcatgcgcttgaagtgtgcgcgttcgatttccagcaacaggccggcttcgcctgactggataaagacagtttcagcgtcgagcaggctcttttcgtactgacatggcgagctg                            <  7:164812‑M2/149‑119 (MQ=255)
                                                                                                                    aTGCTGGCCAAGGCCAGCGCCAGCAGCTTCggccagcatgcgcttgaagtgtgcgcgttcgatttccagcaacaggccggcttcgcctgactggataaagacagtttcagcgtcgagcaggctcttttcgtactgacatggcgagctg                            >  6:27469‑M2/1‑30 (MQ=255)
                                                                                                                    aTGCTGGCCAAGGCCAGCGCCAGCAGCTTCggccagcatgcgcttgaagtgtgcgcgttcgatttccagcaacaggccggcttcgcctgactggataaagacagtttcagcgtcgagcaggctcttttcgtactgacatggcgagctg                            <  5:27469‑M2/148‑119 (MQ=255)
                                                                                                                    aTGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCACTGCCCGACGCATTCAGAAACGCCTGGAAGAAAc                           >  7:1276/1‑149 (MQ=255)
                                                                                                                        tGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCACTGCCCGACGCATTCAGAAACGCCTGGAAGAAACCATc                       >  3:213341/1‑149 (MQ=255)
                                                                                                                          gCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCACCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCACTGCCCGACGCATTCAGAAACGCCTGGAAGAAACCATCg                      >  8:303162/1‑148 (MQ=255)
                                                                                                                            cAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCACTGCCCGACGCATTCAGAAACGCCTGGAAGAAACCATCGaaa                   <  4:86520/149‑1 (MQ=255)
                                                                                                                               ggCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCACTGCCCGACGCATTCAGAAACGCCTGGAAGAAACCATCGAAATTc                <  2:350172/149‑1 (MQ=255)
                                                                                                                                 ccagcgccagcAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCACTGCCCGACGCATTCAGAAACGCCTGGAAGAAACCATCGAAATTCCa              <  4:347676/149‑1 (MQ=255)
                                                                                                                                       ccagcAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCTCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCACTGCCCGACGCATTCAGAAACGCCTGGAAGAAACCATCGAAATTCCACCGCTc        <  4:288740/149‑1 (MQ=255)
                                                                                                                                           cagcTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCACTGCCCGACGCATTCAGAAACGCCTGGAAGAAACCATCGAAATTCCACCGCTCGcc     >  1:311480/1‑148 (MQ=255)
                                                                                                                                           cagcTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCACTGCCCGACGCATTCAGAAACGCCTGGAAGAAACCATCGAAATTCAACCGCTCGcc     >  1:137484/1‑148 (MQ=255)
                                                                                                                                             gcTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCACTGCCCGACGCATTCAGAAACGCCTGGAAGAAACCATCGAAATTCCACCGCTCGCCGac  <  4:346560/149‑1 (MQ=255)
                                                                                                                                              cTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCACTGCCCGACGCATTCAGAAACGCCTGgaa                                <  7:191035/118‑1 (MQ=255)
                                                                                                                                              cTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCACTGCCCGACGCATTCAGAAACGCCTGgaa                                >  8:191035/1‑118 (MQ=255)
                                                                                                                                                 |                                                                                                                                                
CGCTGACCAGCTCGCCATGTCAGTACGAAAAGAGCCTGCTCGACGCTGAAACTGTCTTTATCCAGTCAGGCGAAGCCGGCCTGTTGCTGGAAATCGAACGCGCACACTTCAAGCGCATGCTGGCCAAGGCCAGCGCCAGCAGCTTCGGCCAGCAAGTTGAAGCCATCAGCCCCAATCTCGACCGCCCCGATGACGACACCCGGGAAATCACCGATGCGGTCCAGGCCTTCACTGCCCGACGCATTCAGAAACGCCTGGAAGAAACCATCGAAATTCCACCGCTCGCCGAC  >  NC_002947/6059268‑6059557

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.