| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,652,972 | T→C | 6.4% | intergenic (‑73/+88) | PP_4961 ← / ← PP_4962 | lipoprotein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,652,972 | 0 | T | C | 6.4% | 165.5 / 2.4 | 64 | intergenic (‑73/+88) | PP_4961/PP_4962 | lipoprotein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (31/28); new base C (2/2); total (33/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.16e-02 | |||||||||||
GGCCGGTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGG > NC_002947/5652825‑5653120 | ggCCGGTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGtctc < 4:8116/149‑1 (MQ=255) ggTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGCACCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCtgt < 1:278301/149‑1 (MQ=255) gTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTgg < 7:70832/149‑1 (MQ=255) gcCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGAGACTGCACTGTACCTGTGGGAGCg < 8:112879/149‑1 (MQ=25) agcagTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGccc > 8:39161/1‑149 (MQ=255) gcagTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCcg > 5:199905/1‑149 (MQ=255) cagTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGc > 4:73487/1‑145 (MQ=255) cagTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGc < 3:73487/145‑1 (MQ=255) gCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTgg > 8:50733/1‑127 (MQ=255) gCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTgg < 7:50733/127‑1 (MQ=255) gCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAggg > 7:223909/1‑149 (MQ=255) cATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGc > 8:142272/1‑149 (MQ=255) cTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGca > 6:288572/1‑149 (MQ=255) tGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGca > 5:307628/1‑148 (MQ=255) cAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCGGTGCGGC‑CCTTCGCGGGCTCGCCCGCTCCCACAGAGACTGCACTGTACCTGTGGGAGCGGGCGAGCCCGAGAAGGGCTGCACAGc < 6:4517/149‑1 (MQ=14) aGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGGGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCg < 3:95436/149‑1 (MQ=255) tCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGccc > 7:367341/1‑149 (MQ=255) ccccAGGGCCGCCACGGCAAAACCCCGTTCCATTCCTTTTCCTCCATTGGGGCCGGCGGCGCCGC‑CCTTCCCGGCCGCCCCCGCCCCCCCCGGTCCAGTCCCGGCTCTGTGGGCGGGGGCGAGCCCGCGAAGGGCCGCACAGCGGcccc < 8:342102/147‑1 (MQ=255) gCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCct < 6:307628/149‑1 (MQ=255) ccAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCctt > 5:293744/1‑149 (MQ=255) cAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACCGTGCAGGCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCcttc < 5:146477/149‑1 (MQ=255) ccGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCaa < 6:293744/149‑1 (MQ=255) tacccGGCCAAACGGGGTTTCATTCCGTTCCCTCGTTTGGGGGCTGCGGGGCTGC‑CGTTCTCGGGCTGGCCCGGTCCCACTGTAACTTTCCCGTCGGTGTGGGAGGGGGCGTGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGa < 2:8702/145‑1 (MQ=255) aaaGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTGGTCAAGACCACAAATc > 4:258592/1‑148 (MQ=255) aaaGCGATTTAATACAGTTTCCTCGATTGGGGGCTGGTGTCCAGC‑CCTTCTCGGGCGCCCCCGCACCCACTGGTACCGGCCAGTCTCTGTGGTAGCGGGCTAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCa < 7:142272/149‑1 (MQ=25) cgcTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGt < 5:288572/149‑1 (MQ=255) gcTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGtt < 6:199905/149‑1 (MQ=255) tcattcaGTTTCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAgg > 3:306604/1‑149 (MQ=255) cattcaGTTTCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAACGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGt > 6:379772/1‑149 (MQ=255) tCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTAttt > 3:187654/1‑148 (MQ=255) ccTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCGTCTTCAAGACGACAAATCAACGTTCAGGTTGCCTATTAc > 5:228518/1‑149 (MQ=255) tCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTAccc > 3:7547/1‑149 (MQ=255) tttGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGAt > 2:1299/1‑148 (MQ=255) tttGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGGGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATc < 8:220010/149‑1 (MQ=255) ggggCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGGCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAg < 8:367341/149‑1 (MQ=255) gggCTGCTGTGCAGC‑CTTCCTCGGGCGCGCCCGCTCCCACAGGAACAGGCCAGTCTCTGTGGTTGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAg < 7:49821/148‑1 (MQ=255) gggCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACCGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAgg < 4:256457/149‑1 (MQ=255) gggCTGCTGTGCAGC‑CCGTGTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAg < 5:297216/148‑1 (MQ=255) ggcctggtgTGCTGC‑CCTTGGGGGGCCGGCCGGCCCCCACCGTTCCTGTGCAGTCTCGGGGGCTGGGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAAGGTTCAGGTTGCCTATTACCCGATCAAgg < 4:262536/146‑1 (MQ=255) gcctgcggGGCCGC‑CCTTCTCGGGCGCCCCCGCCCCCACCGCTACAGTGCCGCCTCTGGGGGCGGGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAggg < 6:228518/147‑1 (MQ=255) ctgctgTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGc > 3:41351/1‑148 (MQ=255) tgtgCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAg > 4:348117/1‑141 (MQ=255) tgtgCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAg < 3:348117/141‑1 (MQ=255) tgctgc‑CCTTCTCGGGCTCGCCCGCTCCCACAGTTACTGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCgg < 5:322404/149‑1 (MQ=255) gCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGgc > 8:123930/1‑149 (MQ=255) cAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGgcg > 1:244203/1‑149 (MQ=255) aGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGACGGGCCGCCCAGCGGCCCCGTCTTCAAGACCACAAAGCAACGTTCAGGTTGGCGATTTCCCGCTCAAGGGCAACCCGgcgc > 5:233400/1‑149 (MQ=38) aGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGAGCAAGGGCAACCCGgcgc > 2:334216/1‑149 (MQ=255) cTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGAAGTCTCTGTGGGAGCGGGCGAGCACGCGCAGGGCCGCAAAGCGGCCCCGTATTCAAGACCACAAAGCAACGTTCAGGTTGCCTATTTCGCGATCAAGGGCAACCCGGCGCCGTg > 4:337751/1‑149 (MQ=255) ttCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTgc > 5:290206/1‑149 (MQ=255) ggCGCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCTAGGGCAACCCGGCGCCTTGCGCtggt < 1:11631/149‑1 (MQ=255) ggCGCGCCCGCTCCCACAGGAACAGTGCAGTCTCTGGGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCtggt < 8:223909/149‑1 (MQ=255) gCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACCGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTTTTACCCGATCAAGGGCAACCCGGCGCCTTGCGCtggtg > 3:51105/1‑149 (MQ=255) gCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCtt < 3:225340/140‑1 (MQ=255) gCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCtt > 4:225340/1‑140 (MQ=255) cTCGCCCGCTCCCACAGAGACTGCACTGTACCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCtggtgg > 4:13148/1‑149 (MQ=25) gCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCACGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCt > 1:281917/1‑149 (MQ=255) cccGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCtt > 5:245833/1‑149 (MQ=255) cccGCTCCCACAGAGACTGCACTGTACCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCtt > 4:386470/1‑149 (MQ=25) ccGCTCCCTCTGCTACAGTGCTGGGTCTGTGGGTGGGGGCGAGCCCGCGAAGGGCCGCACAGCTGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTtc < 4:51105/149‑1 (MQ=255) ccACCGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTa < 4:41351/149‑1 (MQ=255) ccACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTa > 4:246419/1‑149 (MQ=255) gTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTtcg > 4:311665/1‑138 (MQ=255) ctACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTtcg < 3:311665/137‑1 (MQ=255) tGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGcc < 1:1299/149‑1 (MQ=255) tctcTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCg > 8:68362/1‑149 (MQ=255) tctGTGGGAGCGGGCGAGGCCGCGAAGGGCCGCACAGCGGCCGCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCggg < 3:249967/149‑1 (MQ=255) | GGCCGGTTGCGCCGGCTGCAGCAGTGAGCATCCTGCCAGTGTCGCCAGGGCCGTCACGGCCAAAAGCGCTTTCATTCAGTTTCCTCGATTTGGGGCTGCTGTGCAGC‑CCTTCTCGGGCTCGCCCGCTCCCACAGGTACAGTGCAGTCTCTGTGGGAGCGGGCGAGCCCGCGAAGGGCCGCACAGCGGCCCCTTCTTCAAGACCACAAATCAACGTTCAGGTTGCCTATTACCCGATCAAGGGCAACCCGGCGCCTTGCGCTGGTGGTCTTCGTCGTACTTTTCCAGGCCTTCCGGG > NC_002947/5652825‑5653120 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |