| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,762,503 | T→A | 5.2% | intergenic (+19/‑122) | gpmI → / → PP_5057 | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase/M23/M37 family peptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,762,503 | 0 | T | A | 5.2% | 226.0 / 2.4 | 77 | intergenic (+19/‑122) | gpmI/PP_5057 | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase/M23/M37 family peptidase |
| Reads supporting (aligned to +/- strand): ref base T (41/32); new base A (2/2); total (43/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.02e-01 | |||||||||||
TGGGCAAGCGCAACGTGAAAGTGCGCGAGGGCGGCGTGCTGGCCGACGTGGCGCCAACCATGCTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGCCCTGATCCTCCTAGC > NC_002947/5762357‑5762650 | tGGGCAAGCGCAACGTGAAAGTGCGCGAGGGCGGCGTGCTGGCCGACGTGGCGCCAACCATGCTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑Tg < 5:347640/149‑1 (MQ=255) aaGCGCAACGTGAAAGTGCGCGAGGGCGGCGTGCTGGCCGACGTGGCGCCAACCATGCTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGATATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGcc > 5:92181/1‑149 (MQ=255) aaGCGCAACGTGAAAGTGCGCGAGGGCGGCGTGCTGGCCGACGTGGCGCCAACCATGCTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGcc < 5:64862/149‑1 (MQ=255) gcgcAACGTGAAAGTGCGCGAGGGCGGCGTGCTGGCCGACGTGGCGCCAACCATGCTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGccc > 6:283876/1‑148 (MQ=255) gcAACGTGAAAGTGCGCGAGGGCGGCGTGCTGGCCGACGTGGCGCCAACCATGCTGAAGCTGCGGGGGCTGGAACAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGt‑t < 8:83665/139‑1 (MQ=255) aaCGTGAAAGTGCGCGAGGGCGGCGTGCTGGCCGACGTGGCGCCAACCATGCTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAAtt < 1:286330/149‑1 (MQ=255) cGTGAAAGTGCGCGAGGGCGGCGTGCTGGCCGACGTGGCGCCAACCATGCTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTg > 7:115017/1‑148 (MQ=255) gTGAAAGTGCGCGAGGGCGGCGTGCTGGCCGACGTGGCGCCAACCATGCTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGca > 6:385138/1‑149 (MQ=255) tGAAAGTGCGCGAGGGCGGCGTGCTGGCCGACGTGGCGCCAACCATTCTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGAACGGTACCTCGATTCTGGTCGACGCCTGAATAGTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGca < 1:47937/149‑1 (MQ=255) tGAAAGTGCGCGAGGGCGGCGTGCTGGCCGACGTGGCGCCAACCATGCTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGca > 8:201896/1‑148 (MQ=255) aaaGTGCGCGAGGGCGGCGTGCTGGCCGACGTGGCGCCAACCATGCTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCATTTGCACAt < 4:180962/149‑1 (MQ=255) gTGCGCGAGGGCGGCGTGCTGGCCGACGTGGCGCCAACCATGCTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGaa > 5:150711/1‑149 (MQ=255) gcgAGGGCGGCGTGCTGGCCGATGTGGCGCCAACCATGCTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTc > 3:204509/1‑148 (MQ=255) gcgAGGGCGGCGTGCTGGCCGACGTGGCGCCAACCATGCTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGCCCGGTACCTCGATTCTGGTCGCCGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTcc > 7:155276/1‑149 (MQ=255) gcgAGGGCGGCGTGCTGGCCGACGTGGCGCCAACCATGCTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTc > 3:363232/1‑148 (MQ=255) gAGGGCGGCGTGCTGGCCGACGTGGCGCCAACCATGCTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTc > 8:277459/1‑146 (MQ=255) gAGGGCGGCGTGCTGGCCGACGTGGCGCCAACCATGCTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GT‑GAAAGGGGCTGCGT‑TGCAGCCCCAATTGc < 1:356328/135‑1 (MQ=255) gAGGGCGGCGTGCTGGCCGACGTGGCGCCAACCATGCTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GT‑GAAAGGGGCTGCGT‑TGCAGCCCCAATTGc > 2:356328/1‑135 (MQ=255) gTGCTGGCCGACGTGGCGCCAACCATGCTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGcc < 4:321505/149‑1 (MQ=255) gCCGACGTGGCGCCAACCATGCTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTg > 5:255724/1‑149 (MQ=255) cGACGTGGCGCCAACCATGCTGAAGCTGCTGGGGCTGGAAAAGCCGAATGGAAATGCCCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTg > 1:86442/1‑148 (MQ=255) ccAACCATGCTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCTATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGa < 7:300057/149‑1 (MQ=255) cAACCATGCTGACGCTGCTGGGGCTGGAAAAGCCG‑GGGGAAATGACCGTGACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAg < 8:330341/149‑1 (MQ=255) cATGCTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGt > 4:211396/1‑149 (MQ=255) aTGCTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGCCCGGTACCTCGAGTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGtt > 6:301016/1‑149 (MQ=255) cTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCT‑CGCTGCGGATGCAGGGGGGCGtttgt < 4:204509/149‑3 (MQ=255) cTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGttttt > 4:97964/1‑149 (MQ=255) cTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGttttt > 8:91294/1‑149 (MQ=255) tGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGtttttt > 3:44781/1‑149 (MQ=255) tGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGtttttt > 1:43121/1‑149 (MQ=255) aaGGTGGTGGTGCTTGTAAAGCCG‑GTGGAAATGACGGGTACCTAGATTCTGGTCGACGCCTGAAT‑GTCGTAAGGGGCTGCGT‑TGCAGCCCCAATTGCTCTTGTATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGttttttt < 1:289110/148‑1 (MQ=255) aaGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGttttttt < 5:283876/148‑1 (MQ=255) gctgctGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTtgc < 4:363232/149‑1 (MQ=255) gctgctGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTtgc < 8:125195/149‑1 (MQ=255) ggggCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTtgcctgcc > 1:387504/1‑148 (MQ=255) ggggCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTtgc > 6:357584/1‑143 (MQ=255) ggggCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTtgc < 5:357584/143‑1 (MQ=255) gggCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCg > 7:293655/1‑132 (MQ=255) gggCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCg < 8:293655/132‑1 (MQ=255) tGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTAGGTTCATGCCCAGGCg > 1:332737/1‑149 (MQ=255) gAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCggg < 7:201896/149‑1 (MQ=255) gAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCggg < 5:385138/149‑1 (MQ=255) aaaGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCa < 2:43121/149‑1 (MQ=255) tGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGc < 7:91294/149‑1 (MQ=255) aaaTGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAg > 1:371193/1‑149 (MQ=255) aTGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGtc > 4:212610/1‑149 (MQ=255) ccGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTcc < 2:371193/148‑1 (MQ=255) cTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTgg < 8:55772/149‑1 (MQ=255) tCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTgg > 8:330430/1‑148 (MQ=255) tCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTgg > 7:275530/1‑148 (MQ=255) tCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTgg > 3:376942/1‑148 (MQ=255) tGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGGAGCCCCAATTGCACATGAATTACAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCtt > 8:89034/1‑139 (MQ=255) tGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCa > 7:305045/1‑148 (MQ=255) tGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTACAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCtt < 7:89034/139‑1 (MQ=255) tCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAAcc < 2:86442/149‑1 (MQ=255) gACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAAccc > 7:252003/1‑148 (MQ=255) cGCCTGAAT‑GTCGAAAGGGGCTGCGTGTGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCggg > 1:204153/1‑109 (MQ=255) cGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCggg < 2:204153/108‑1 (MQ=255) cGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCACGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCAt < 6:150711/149‑1 (MQ=255) ccTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGt > 5:259569/1‑133 (MQ=255) ccTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGt < 6:259569/133‑1 (MQ=255) ccTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGc > 7:306464/1‑149 (MQ=255) tGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCtt > 1:174080/1‑149 (MQ=255) tGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCtt > 3:50716/1‑149 (MQ=255) aaT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCtt < 8:15785/147‑1 (MQ=255) aaT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTcg > 1:57477/1‑149 (MQ=255) aT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTcgc > 3:35263/1‑149 (MQ=255) t‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTcgcg > 5:16611/1‑149 (MQ=255) tCGAAAGGGGCTGCGT‑TGCAGCCCCAACTGCACATGAATTCCAGTTCAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGCCCAGTCTCCATCCTTGGTACGCCAAACCCCATGATTCgcgc > 1:278428/1‑149 (MQ=255) gAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCCGCCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGccc > 1:299955/1‑149 (MQ=255) gAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGccc < 2:387504/148‑1 (MQ=255) aattggggCTGCAA‑CGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCa > 2:124658/5‑136 (MQ=255) aattggggCTGCAA‑CGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCa < 1:124658/132‑1 (MQ=255) gggCTGCAA‑CGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAAcc < 7:290091/128‑1 (MQ=255) gggCTGCAA‑CGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAAcc > 8:290091/1‑128 (MQ=255) gCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGCCCTGAtcctc < 2:278428/149‑1 (MQ=255) gCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGCCCTGAtcctc < 7:277459/149‑1 (MQ=255) gT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGCCCTGATCCTCCTAGc < 8:252003/149‑1 (MQ=255) | TGGGCAAGCGCAACGTGAAAGTGCGCGAGGGCGGCGTGCTGGCCGACGTGGCGCCAACCATGCTGAAGCTGCTGGGGCTGGAAAAGCCG‑GTGGAAATGACCGGTACCTCGATTCTGGTCGACGCCTGAAT‑GTCGAAAGGGGCTGCGT‑TGCAGCCCCAATTGCACATGAATTCCAG‑ACAAACGCCC‑CCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGCCCTGATCCTCCTAGC > NC_002947/5762357‑5762650 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |