| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,784,880 | C→A | 8.4% | intergenic (+46/‑117) | kefA → / → PP_5068 | intermediate mechanosensitive channel protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,784,880 | 0 | C | A | 8.4% | 293.1 / 13.9 | 96 | intergenic (+46/‑117) | kefA/PP_5068 | intermediate mechanosensitive channel protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (49/38); new base A (4/4); total (54/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.29e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.07e-01 | |||||||||||
TCGGTACGCCAGGTAGAGGTGTTCCTGATGGATGCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCTTCGA > NC_002947/5784733‑5785025 | tcGGTACGCCAGGTAGAGGTGTTCCTGATGGATGCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCg > 2:104745/1‑149 (MQ=255) ggTACGCCAGGTAGAGGTGTTCCTGATGGATGCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTc < 8:46982/146‑1 (MQ=255) ggTACGCCAGGTAGAGGTGTTCCTGATGGATGCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCg < 4:46048/147‑1 (MQ=255) ggTACGCCAGGTAGAGGTGTTCCTGATGGATGCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGc < 1:104745/148‑1 (MQ=255) ggTACGCCAGGTAGAGGTGTTCCTGATGGATGCGAAGGGCAGCAAGCAGCAAGTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGcc < 6:118532/149‑1 (MQ=255) gTACGCCAGGTAGAGGTGTTCCTGATGGATGCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGccc < 5:82027/149‑1 (MQ=255) cGCCAGGTAGAGGTGTTCCTGATGGATGCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTc < 1:298021/148‑1 (MQ=255) cGCCAGGTAGAGGTGTTCCTGATGGATGCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTc < 2:81982/148‑1 (MQ=255) cGCCAGGTAGAGGTGTTCCTGATGGATGCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCg > 3:24880/1‑149 (MQ=255) ccAGGTAGAGGTGTTCCTGATGGATGCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGtt > 6:27132/1‑149 (MQ=255) cAGGTAGAGGTGTTCCTGATGGATGCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCGAAGCCCTCgcag < 1:181370/149‑4 (MQ=255) gtTCCTGATGGATGCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCGAAGCCCTCgca > 5:366610/1‑135 (MQ=255) gtTCCTGATGGATGCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCGAAGCCCTCgca < 6:366610/137‑3 (MQ=255) ttCCTGATGGATGCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGATTCGCCCTCGTTCGCGGGTAAAccc > 8:322639/1‑149 (MQ=255) ccTGATGGATGCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCg > 6:108600/1‑126 (MQ=255) ccTGATGGATGCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCg < 5:108600/126‑1 (MQ=255) cTGATGGATGCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCt > 3:356954/1‑149 (MQ=255) gatggatgCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTcc > 6:374972/1‑149 (MQ=255) gatggatgCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCGAAGCCCTCgca < 8:67082/131‑3 (MQ=255) gatggatgCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCGAAGCCCTCgca > 7:67082/1‑129 (MQ=255) tggatgCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTAATGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCt > 1:51854/1‑148 (MQ=255) tgCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATc < 4:356954/149‑1 (MQ=255) gCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCg > 3:98252/1‑149 (MQ=255) cGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGccc > 1:16488/1‑118 (MQ=255) cGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGccc < 2:16488/118‑1 (MQ=255) cGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCgg < 4:24880/149‑1 (MQ=255) gAAGGGCAGCAATCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATTGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCggg < 8:161890/149‑1 (MQ=255) gAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGccc > 3:16594/1‑117 (MQ=255) gAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGccc < 4:16594/117‑1 (MQ=255) atggaagcaagcagcaaTTGATTCCTATTGAACAGCCAAAATCTGATGTCACTGCTTCGGCCTGAATTGTCTCGAATACTTTATTGTGTGCATAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGgc < 5:274427/143‑1 (MQ=255) cagcaagcagcaaTTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTgg > 5:299382/1‑149 (MQ=255) caagcagcaaTTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCg > 8:289695/1‑149 (MQ=255) agcaaTTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCtgtg < 5:27132/149‑1 (MQ=255) caaTTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTggg > 3:366412/1‑149 (MQ=255) caaTTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAAACCGATCCTAAATCGGGCGATGGCCGCTGTggg > 3:372258/1‑149 (MQ=255) gATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTgg < 4:159446/143‑1 (MQ=255) gATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTgg > 3:159446/1‑143 (MQ=255) aTTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGgggcggg < 4:98252/149‑1 (MQ=255) aTTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGgggcggg < 5:374972/149‑1 (MQ=255) aTTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGgggcggg > 2:238557/1‑149 (MQ=255) ttCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGgggcgggc > 5:57430/1‑149 (MQ=255) ttCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGgggcggg < 4:15710/148‑1 (MQ=255) ccGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCt < 4:355925/148‑1 (MQ=255) cgatttaaCAGACAAAATCGGATTGCAATGCTTCTGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCATCGTTCGCGGGTAAACCCGCTCCTAAATAGGGCTCTGGCCGCTGTGGGGGCGGGCTc < 4:372258/142‑1 (MQ=255) cGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTc < 4:366412/148‑1 (MQ=255) gATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCAc > 1:357621/1‑149 (MQ=255) gATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCAc < 2:357621/149‑1 (MQ=255) gATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCAc < 3:164320/149‑1 (MQ=255) gATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCACTGGCCGCTGTGGGGGCGGGCTCAc > 6:110927/1‑149 (MQ=255) aaCAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCcgc > 8:1301/1‑148 (MQ=255) aGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGaaa < 2:194033/149‑1 (MQ=255) gCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGCTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAg < 5:381031/149‑1 (MQ=255) cAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCACTCGTTCGCGGGTAAACCCGATCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGgc > 8:108079/1‑149 (MQ=255) aTCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGgccgc > 7:18930/1‑148 (MQ=255) aCTGCTTCGGCCTGAAGGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGccc > 6:45843/1‑148 (MQ=255) cTTCGGCCTGAATTGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGACATCGTTCGCGGGTAAACCCGCTCCTAAAACGGGCGCAGGCCGCTGTGTGGGCTGGCTCACCCCCGAAACGCCGACAAACGGCCCCATTg > 8:344175/1‑149 (MQ=255) cTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCAtt < 7:289695/148‑1 (MQ=255) cTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTg < 1:238557/149‑1 (MQ=255) cTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCCCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTg > 6:37610/1‑149 (MQ=255) ttCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTgg > 3:387389/1‑149 (MQ=255) cGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTg < 3:116184/146‑1 (MQ=255) cGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTg > 4:116184/1‑146 (MQ=255) ggCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCAc > 5:184404/1‑149 (MQ=255) gCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCAcc > 6:43742/1‑149 (MQ=255) cTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCAtt > 2:180744/1‑141 (MQ=255) cTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCAtt < 1:180744/141‑1 (MQ=255) gAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGAtt > 6:87072/1‑149 (MQ=255) gAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGAtt > 4:129310/1‑149 (MQ=255) gAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGAtt > 4:57822/1‑149 (MQ=255) aaTGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGACGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTc > 3:280990/1‑149 (MQ=255) tGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTcc > 4:137292/1‑148 (MQ=255) ggCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAg < 5:43742/149‑1 (MQ=255) ggCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAg < 3:318304/149‑1 (MQ=255) tCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAg > 4:168560/1‑149 (MQ=255) tCGAATACTTTATTGTGTGCAAAATGGCTGCGAGAGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAg > 2:38258/1‑121 (MQ=255) tCGAATACTTTATTGTGTGCAAAATGGCTGCGAGAGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAg < 1:38258/121‑1 (MQ=255) gAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGTGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAg < 5:98624/147‑1 (MQ=255) gAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAg < 7:1301/147‑1 (MQ=255) tttATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCg > 2:333274/1‑149 (MQ=255) tATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCAAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGt < 4:356622/148‑1 (MQ=255) tATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTACTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCCCGAAAGGCCGCCAAGCGGCCCCATTGGCACCCATTCCAAGGAGCACTCCCGt > 6:317467/1‑148 (MQ=255) gtgtgCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGaaa < 8:18930/148‑1 (MQ=255) tgtgCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGc > 8:192035/1‑149 (MQ=255) tgCAAAATGGCTGCGAGGGCTTGGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGccc > 7:58979/1‑149 (MQ=255) aaaTGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGa < 7:272407/149‑1 (MQ=255) aaTGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGAc > 7:145332/1‑149 (MQ=255) gcgaacGAGGGCGAAGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCaa > 2:223531/6‑149 (MQ=255) gCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCaa < 7:322639/148‑1 (MQ=255) gaacGAGGGCGAAGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACt < 1:223531/146‑1 (MQ=255) tGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTc > 3:354997/1‑149 (MQ=255) gCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTcc > 8:89388/1‑148 (MQ=255) acGAGGGCGAAGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACAGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCa > 6:194072/2‑149 (MQ=255) cGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCAc > 6:26281/1‑149 (MQ=255) ggCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCTTc > 2:222614/1‑149 (MQ=255) ggCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCTTc > 3:99931/1‑149 (MQ=255) ttCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCTTCGa > 8:113304/1‑148 (MQ=255) ttCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCTTCGa > 4:251733/1‑148 (MQ=255) | TCGGTACGCCAGGTAGAGGTGTTCCTGATGGATGCGAAGGGCAGCAAGCAGCAATTGATTCCGATGGAACAGCCAAAATCGGATGGCACTGCTTCGGCCTGAATGGGCTCGAATACTTTATTGTGTGCAAAATGGCTGCGAGGGCTTCGCCCTCGTTCGCGGGTAAACCCGCTCCTAAATCGGGCGCTGGCCGCTGTGGGGGCGGGCTCACCCGCGAAAGGCCGCCAAGCGGCCCCATTGGCACCGATTCCAAGGAGCAGTCCCGTGAAAGCCCTCGACCAACTCACCTTCGA > NC_002947/5784733‑5785025 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |