| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,890,793 | G→T | 12.0% | intergenic (+81/+39) | PP_5164 → / ← plpB | penicillin amidase family protein/NLPA lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,890,793 | 0 | G | T | 12.0% | 197.3 / 18.0 | 82 | intergenic (+81/+39) | PP_5164/plpB | penicillin amidase family protein/NLPA lipoprotein |
| Reads supporting (aligned to +/- strand): ref base G (36/34); new base T (4/6); total (41/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.37e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.56e-01 | |||||||||||
GCGGGCGCAGATGGGGGTGATTCCGGCGCAAAGTACCTTACGGCTGGTACCCCCG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAGGGCCTTGGCCAGTTTCTGGATGGCCTCACTGTCCTTGTT > NC_002947/5890652‑5890939 | gCGGGCGCAGATGGGGGTGATTCCGGCGCAAAGTACCTTACGGCTGGTACCCCCG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCgg > 4:111499/1‑149 (MQ=255)gCGGGCGCAGATGGGGGTGATTCCGGCGCAAAGTACCTTACGGCTGGTACCCCCG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCgg > 1:379218/1‑149 (MQ=255) cGGGCGCAGATGGGGGTGATTCCGGCGCAAAGTACCTTACGGCTGGTACCCCCG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACCTTGTGTCGGc < 1:8504/149‑1 (MQ=255) gggCGCAGATGGGGGTGATTCCGGCGCAAAGTACCTTACGGCTGGTACCCCCG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACCTTGTGTCGGCg > 4:12654/1‑149 (MQ=255) gggCGCAGATGGGGGTGATTCCGGCGCAAAGTACCTTACGGCTGGTACCCCCG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCg < 6:222442/149‑1 (MQ=255) ggCGCAGATGGGGGTGATTCCGGCGCAAAGTACCTTACGGCTGGTACCCCCG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACCTTGTGTCGGCGt < 3:12654/149‑1 (MQ=255) gcgcAGATGGGGGTGATTCCGGCGCAAAGTACCTTACGGCTGGTACCCCCGCAAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGt > 1:294678/1‑149 (MQ=255) aGATGGGGGTGATTCCGGCGCAAAGTACCTTACGGCTGGTACCCCCG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGca < 3:111499/149‑1 (MQ=255) tGGGGGTGATTCGGGCGAAAAGTCCCTTACGGCTGGTACCCCCG‑AAGTACGCGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGGGCGGGCAGGGCTGAACAAAAACGCCCACACCTTGTGTCGGCGtttttctt < 2:342027/148‑7 (MQ=255) ggTGATTCCGGCGCAAAGTACCTTACGGCTGGTACCCCCG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACatat > 3:3621/1‑147 (MQ=255) ggTGATTCCGGCGCAAAGTACCTTACGGCTGGTACCCCCG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACatat > 3:9117/1‑147 (MQ=255) ggTGATTCCGGCGCAAAGTACCTTACGGCTGGTACCCCCG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTCCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACatat > 8:127809/1‑147 (MQ=255) gATTCCGGCGCAAAGTACCTTACGGCTGGTACCCCCG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGc > 1:386689/1‑149 (MQ=255) aTTCCGGCGCAAAGTACCTTACGGCTGGTACCCCCG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGc < 1:210462/148‑1 (MQ=255) aTTCCGGCGCAAAGTACCTTACGGCTGGTACCCCCG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCg > 4:291228/1‑149 (MQ=255) aTTCCGGCGCAAAGTACCTTACGGCTGGTACCCCCG‑AAGAAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCg > 1:101182/1‑149 (MQ=255) ttCCGGCGCAAAGTACCTTACGGCTGGTACCCCCG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCg < 4:350029/148‑1 (MQ=255) ttCCGGCGCAAAGTACCTTACGGCTGGTACCCCCG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGt > 6:155651/1‑149 (MQ=255) ttCCGGCGCAAAGTACCTTACGGCTGGTACCCCCG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTACGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGt < 4:117272/149‑1 (MQ=255) ggCGCAAAGTACCTTACGGCTGGTACCCCCG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGc > 5:309902/1‑148 (MQ=255) ggCGCAAAGTACCTTACGGCTGGTACCCCCG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAACGTGTCGGCGTTGGCACATATCAGGCGTTgg > 7:151673/1‑147 (MQ=255) gcgcAAAGTACCTTACGGCTGGTACCCCCG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTa < 2:17354/149‑1 (MQ=255) gTACCTTACGGCTGGTACCCCCG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAAt < 3:334888/149‑1 (MQ=255) cTTACGGCTGGTACCCCCG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAg > 3:246975/1‑148 (MQ=255) ttACGGCTGGTACCCCCG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGaa > 5:308851/1‑149 (MQ=255) aCGGCTGGTACCCCCG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAAc < 5:399504/148‑1 (MQ=255) gTACCCCCG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAg > 3:123036/1‑149 (MQ=255) cccG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACgg > 4:151256/1‑149 (MQ=255) cccG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACgg > 6:374167/1‑149 (MQ=255) cccG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACgg > 3:271895/1‑149 (MQ=255) ccG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACgg > 1:67652/1‑148 (MQ=255) tAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTg < 2:294678/149‑1 (MQ=255) tAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTg < 5:155651/149‑1 (MQ=255) ggCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTAct > 5:33467/1‑149 (MQ=255) ctTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACAGAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTg < 7:250759/149‑1 (MQ=255) tGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCTACACACTGGGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCATAACGCCGGCAGTACGGCACCTTGGTACTTCTTgg < 2:393684/147‑1 (MQ=255) tGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAACGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTgg < 2:387654/147‑1 (MQ=255) cGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCaa < 2:67652/148‑1 (MQ=255) ggcatcTTCGCAGCAAAAGGCTTCTACGTTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCaat < 6:271318/143‑1 (MQ=255) ggCCGCTTCGCAGAATAAGGCTTCTACGTTGCTGTGCGGGCAGGGCTTAAGAAAAACGCCGACACAAGGTGTCGGCTTTTGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCaatg < 1:24798/149‑1 (MQ=255) gCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCaatg > 3:189219/1‑148 (MQ=255) tCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGt > 6:93450/1‑88 (MQ=255) tCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGt < 5:93450/88‑1 (MQ=255) aaaGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTcc > 6:164784/1‑149 (MQ=255) aaGGCTTCTACGGTGATGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAAAGAATGACTTGACATCCg > 8:222377/1‑149 (MQ=255) aGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCgg < 3:291228/149‑1 (MQ=255) aGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCgg < 2:379218/149‑1 (MQ=255) gCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGc < 5:334955/149‑1 (MQ=255) gCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGc > 7:368647/1‑149 (MQ=255) cGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGt < 4:271895/146‑1 (MQ=255) ggTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAAGGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATTCCTTGACTTCCGGGCTGGTCAgg < 6:308851/149‑1 (MQ=255) ggTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAgg < 6:309902/149‑1 (MQ=255) ggTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAgg > 8:34736/1‑149 (MQ=255) tgCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAGGGCCTTgg > 3:18388/1‑149 (MQ=255) tgCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAGGGCCTTg < 1:261930/148‑1 (MQ=255) tgCGGGCAGGCCAGAAGACAAACGCCCACACACGCTGTCGGCGTAGGCACATATCAGGCGTTGCTAGCT‑AAATCAGACCGCCGGCATTAATGCACGTAGGTTCTTCTTGGCAATGTTAGGCTTGACTTCCGGGCTTGTCAGGGCCTTg < 6:106394/148‑1 (MQ=255) aGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAGGGCCTTGGCCAGtt > 8:252545/1‑148 (MQ=255) gggCTTAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGACGGCAGTACGGCACCTTTGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAGGGCCTTGGCCAGTTTc < 3:230318/149‑1 (MQ=255) gggCTCAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTTCGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAGGGCCTTGGCCAGTTTc < 7:127809/149‑1 (MQ=255) ggCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAGGGCCTTGGCCAGTTTCt < 8:368647/149‑1 (MQ=255) tGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAGGGCCtt > 5:243025/1‑135 (MQ=255) tGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAGGGCCtt < 6:243025/135‑1 (MQ=255) tGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAGGGCCTTGGCCAGTTTCt < 2:148682/146‑1 (MQ=255) tGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAGGGCCTTGGCCAGTTTCt > 1:148682/1‑146 (MQ=255) gaagaaAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAGGGCCTTGGCCAGTTTCTGGAt > 2:63163/1‑149 (MQ=255) gaagaaAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGAGAAAATCAGAACGACCGCAGTACGGCACCTTGGTAATTCTTGGCAATGAATGCATTGACTTCCGGGCTGGTCCGGGCCTTGGCCAGTTTCTGGa > 1:106796/1‑149 (MQ=255) aagaaAAACGCCGACACAAGGTGTCGGCGTTGGAACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTTGTACTTCTTGGCAATGCATGCCTTGACTTCCGGGCTGGTCAGGGCCTTGGCCAGTTTCTGGATg > 4:226348/1‑149 (MQ=255) agaaAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAGGGCCTTGGCCAGTTTCTGGATgg < 5:374167/149‑1 (MQ=255) caaCGCCGACACCTTGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAGGGCCTTGGCCAGTTTCTGGAt < 2:27764/142‑1 (MQ=255) caaCGCCGACACCTTGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAGGGCCTTGGCCAGTTTCTGGAt > 1:27764/2‑143 (MQ=255) caaCGCCGACACCTTGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAGGGCCTTGGCCAGTTTCTGGATGGCCTc > 5:393038/2‑149 (MQ=255) aCGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAgg > 2:161411/1‑121 (MQ=255) aCGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAgg < 1:161411/121‑1 (MQ=255) cGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAGGGCCTTGGCCAGTTTCTGGATGGCCTCACt < 4:9117/149‑1 (MQ=255) cGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAGGGCCTTGGCCAGTTTCTGGATGGCCTCACt < 4:3621/149‑1 (MQ=255) gCCGACACCTTGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAGGGCCTTGGCCAGTTTCTGGATGGcc < 6:319496/143‑1 (MQ=255) gCCGACACCTTGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAGGGCCTTGGCCAGTTTCTGGATGGcc > 5:319496/1‑143 (MQ=255) cacaAGGTGTCGGCGTTGGCACATATCATGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAGGGCCTTGGCCAGTTTCTGGATGGCCTCACTGTCCtt < 8:151673/149‑1 (MQ=255) cacaAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAGGGCCTTGGCCAGTTTCTGGATGGCCTCACTGTCCtt < 1:63163/149‑1 (MQ=255) caAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAGGGCCTTGGCCAGTTTCTGGATGGCCTCACTGTCCttgt > 8:89100/1‑149 (MQ=255) aaGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAGGGCCTTGGCCAGTTTCTGGATGGCCTCACTGTCCttgtt > 7:144232/1‑149 (MQ=255) aaGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAGGGCCTTGGCCAGTTTCTGGATGGCCTCACTGTCCttgtt > 8:53784/1‑149 (MQ=255) | GCGGGCGCAGATGGGGGTGATTCCGGCGCAAAGTACCTTACGGCTGGTACCCCCG‑AAGTAAGAGGCTGCTTTGCGGCCGCTTCGCAGCAAAAGGCTTCTACGGTGCTGTGCGGGCAGGGCTGAAGAAAAACGCCGACACAAGGTGTCGGCGTTGGCACATATCAGGCGTTGCTAGCG‑AAATCAGAACGCCGGCAGTACGGCACCTTGGTACTTCTTGGCAATGAATGCCTTGACTTCCGGGCTGGTCAGGGCCTTGGCCAGTTTCTGGATGGCCTCACTGTCCTTGTT > NC_002947/5890652‑5890939 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |