Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,930,938 C→T 5.7% A378T (GCA→ACA)  ubiH ← 2‑octaprenyl‑6‑methoxyphenyl hydroxylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,930,9380CT 5.7% 322.8 / 6.1 105A378T (GCA→ACA) ubiH2‑octaprenyl‑6‑methoxyphenyl hydroxylase
Reads supporting (aligned to +/- strand):  ref base C (54/45);  new base T (3/3);  total (57/48)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.01e-01

Only 100 of 105 total aligned reads displayed.

CGGCACCCAGGTACGGTGGGTAGAGGTTCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGCCTGGTCCAGGCGCTGGCGCTGGTGATAGGC  >  NC_002947/5930792‑5931079
                                                                                                                                                  |                                                                                                                                             
cGGCACCCAGGTACGGTGGGTAGAGGTTCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGTCg                                                                                                                                             >  1:292920/1‑149 (MQ=255)
cGGCACCCAGGTACGGTGGGTAGAGGTTCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGTCg                                                                                                                                             >  1:298018/1‑149 (MQ=255)
cGGCACCCAGGTACGGTGGGTAGAGGTTCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGTCg                                                                                                                                             >  7:29807/1‑149 (MQ=255)
cGGCACCCAGGTACGGTGGGTAGAGGTTCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCg                                                                                                                                             >  7:152458/1‑149 (MQ=255)
  gCACCCTGGTACTGTGGGTAGAGGTTCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGt                                                                                                                                           <  3:159756/149‑1 (MQ=255)
  gCACCCAGGTACGGTGGGTAGAGGTTCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGt                                                                                                                                           <  4:366488/149‑1 (MQ=255)
   cACCCAGGTACGGTGGGTAGAGGTTCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTg                                                                                                                                          <  7:349565/149‑1 (MQ=255)
    aCCCAGGTACGGTGGGTAGAGGTTCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTgg                                                                                                                                         <  6:368494/149‑1 (MQ=255)
       cAGGTACGGTGGGTAGAGGTTCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCaa                                                                                                                                      >  2:348739/1‑149 (MQ=255)
        aGGTACGGTGGGTAGAGGTTCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCaa                                                                                                                                      >  1:50388/1‑148 (MQ=255)
        aGGTACGGTGGGTAGAGGTTCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCaa                                                                                                                                      >  1:146461/1‑148 (MQ=255)
        aGGGACGGAGGGCAGAGGTTCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTGTACGCGGGGTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAAc                                                                                                                                     <  8:318788/149‑1 (MQ=255)
          gTACGGTGGGTAGAGGTTCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAg                                                                                                                                   >  1:346800/1‑149 (MQ=255)
             cGGTGGGTAGAGGTTCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTc                                                                                                                                <  3:268070/149‑1 (MQ=255)
              ggTGGGTAGAGGTTCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTc                                                                                                                                >  6:185508/1‑148 (MQ=255)
               gTGGGTAGAGGTTCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGt                                                                                                                                 >  6:276644/1‑146 (MQ=255)
               gTGGGTAGAGGTTCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGt                                                                                                                                 <  5:276644/146‑1 (MQ=255)
                tGGGTAGAGGTTCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAg                                                                                                                             >  4:374555/1‑149 (MQ=255)
                   gTAGAGGTTCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGTTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCACCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGccc                                                                                                                          <  3:31265/149‑1 (MQ=255)
                   gTAGAGGTTCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGccc                                                                                                                          <  7:255995/149‑1 (MQ=255)
                      gagGTTCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGa                                                                                                                        <  5:261517/148‑1 (MQ=255)
                      gagGTTCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAg                                                                                                                       <  5:45439/149‑1 (MQ=255)
                         gTTCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAg                                                                                                                    >  5:242902/1‑149 (MQ=255)
                         gTTCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCAAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAg                                                                                                                    >  4:215077/1‑149 (MQ=255)
                          ttCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAgg                                                                                                                   >  5:372258/1‑149 (MQ=255)
                              gCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGc                                                                                                                                        <  6:57905/124‑1 (MQ=255)
                              gCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGcc                                                                                                                 >  8:311852/1‑147 (MQ=255)
                               cATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAg                                                                                                              <  3:90568/149‑1 (MQ=255)
                                 tCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGt                                                                                                            <  3:322432/149‑1 (MQ=255)
                                   cAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGtt                                                                                                           <  8:152458/148‑1 (MQ=255)
                                    aGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGc                                                                                                         >  8:342232/1‑149 (MQ=255)
                                    aGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGc                                                                                                         >  1:308428/1‑149 (MQ=255)
                                      cgcAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGt                                                                                                       >  8:332858/1‑149 (MQ=255)
                                         agcaTGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCg                                                                                                    >  4:44611/1‑149 (MQ=255)
                                                gcgcCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCa                                                                                             <  4:172627/149‑1 (MQ=255)
                                                gcgcCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCa                                                                                             <  7:332858/149‑1 (MQ=255)
                                                  gcCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGc                                                                                           <  6:260781/149‑1 (MQ=255)
                                                     cGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAAc                                                                                        <  7:342232/149‑1 (MQ=255)
                                                      ggCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACg                                                                                       >  3:309216/1‑149 (MQ=255)
                                                        cgcgcCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGc                                                                                     <  3:374555/149‑1 (MQ=255)
                                                            ccAGTTTACGCGGGATGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCACCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGCTTGCGTCCGGCCGTCAGCAACGGCTGAt                                                                                 >  6:959/1‑149 (MQ=255)
                                                             cAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGAtt                                                                                <  6:372258/149‑1 (MQ=255)
                                                             cAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGAtt                                                                                >  7:312690/1‑149 (MQ=255)
                                                                   aCGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATtgctgc                                                                           <  8:312690/148‑1 (MQ=255)
                                                                      cgGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGaa                                                                       <  2:308428/149‑1 (MQ=255)
                                                                        ggTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGac                                                                       >  2:249687/1‑146 (MQ=255)
                                                                             cTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGTCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCgg                                                                <  2:292920/149‑1 (MQ=255)
                                                                             cTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGTCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCgg                                                                <  2:298018/149‑1 (MQ=255)
                                                                             cTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGTCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCgg                                                                <  8:29807/149‑1 (MQ=255)
                                                                              tCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCggg                                                               >  7:23608/1‑149 (MQ=255)
                                                                              tCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCggg                                                               >  5:240864/1‑149 (MQ=255)
                                                                               cATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGt                                                              >  6:47934/1‑149 (MQ=255)
                                                                                aTGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCggg                                                               <  1:353543/147‑1 (MQ=255)
                                                                                aTGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGt                                                              >  2:302689/1‑148 (MQ=255)
                                                                                   ccTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGAcc                                                          >  6:358925/1‑149 (MQ=255)
                                                                                        ccccGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTc                                                     <  2:146461/149‑1 (MQ=255)
                                                                                         cccGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCg                                                    >  4:133798/1‑149 (MQ=255)
                                                                                          ccGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCg                                                    >  5:176204/1‑148 (MQ=255)
                                                                                           cgcgGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCg                                                    >  2:357745/1‑147 (MQ=255)
                                                                                           cgcgGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGga                                                  <  2:50388/149‑1 (MQ=255)
                                                                                            gcgGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGgag                                                 <  1:348739/149‑1 (MQ=255)
                                                                                              ggATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGAtt                                                                                >  6:75901/1‑116 (MQ=255)
                                                                                              ggATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGAtt                                                                                <  5:75901/116‑1 (MQ=255)
                                                                                                aTCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGc                                             >  5:190497/1‑149 (MQ=255)
                                                                                                aTCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGGCGGAGAAGc                                             <  5:47934/149‑1 (MQ=255)
                                                                                                     ggCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATg                                        <  3:215077/149‑1 (MQ=255)
                                                                                                     ggCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATg                                        <  7:311852/149‑1 (MQ=255)
                                                                                                         ggTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCa                                    <  5:959/149‑1 (MQ=255)
                                                                                                            gCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAg                                 >  8:236924/1‑149 (MQ=255)
                                                                                                              ccAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGcc                               >  7:287969/1‑149 (MQ=255)
                                                                                                              ccAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGcc                               <  5:185508/149‑1 (MQ=255)
                                                                                                              ccAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGc                                >  4:366902/1‑148 (MQ=255)
                                                                                                              ccAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGc                                <  3:366902/148‑1 (MQ=255)
                                                                                                               cAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGCCt                              >  2:383336/1‑149 (MQ=255)
                                                                                                                  gCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGCCTGGt                           <  6:242902/149‑1 (MQ=255)
                                                                                                                      aTCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGCCTGGTCCAg                       <  5:358925/149‑1 (MQ=255)
                                                                                                                      aTCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGACAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGACAGCAACGGCTGATTGCTGCCGAACAGGCGGCTGAACTGGTCGGAGAAGCCGATGGTCATAGCATCGTCAAg                       >  4:233852/1‑149 (MQ=255)
                                                                                                                         tccTGGCGGGCGAACCAGCTTTTTTCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTTCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGAGGGTGAACTGGTCGGAGAAGCCGATGGTCATAGACTGGTCCAgtcg                    >  5:274897/2‑149 (MQ=255)
                                                                                                                         gCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGCCTGGTCCAggcg                    >  5:284693/1‑149 (MQ=255)
                                                                                                                          ccTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGCCTGGTCCAggcgc                   >  6:272072/1‑149 (MQ=255)
                                                                                                                          ccTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGCCTGGTCCAggcgc                   >  5:84949/1‑149 (MQ=255)
                                                                                                                           cTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGCCTGGTCCAggcgct                  <  5:272072/149‑1 (MQ=255)
                                                                                                                            tGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGCCTGGTCCAggcgctg                 >  5:216990/1‑149 (MQ=255)
                                                                                                                             ggcgggcgAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTc                                                     <  8:169218/112‑1 (MQ=255)
                                                                                                                                 ggcgAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGCCTGGTCCAggcgctggcgct            >  6:213799/1‑149 (MQ=255)
                                                                                                                                  gcgAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGCCTGGTCCAGgcgctggcgctg           >  3:28208/1‑149 (MQ=255)
                                                                                                                                    gAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGCCTGGTCCAGGCGCTGGCGCTGGt         >  4:180721/1‑149 (MQ=255)
                                                                                                                                    gAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGCCTGGTCCAGGCGCTGGCGCTGGt         <  7:8564/149‑1 (MQ=255)
                                                                                                                                    gAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGCCTGGTCCAGGCGCTGGCGCTGGt         >  6:356963/1‑149 (MQ=255)
                                                                                                                                        cAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGt                                      <  4:268327/116‑1 (MQ=255)
                                                                                                                                        cAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGt                                      >  3:268327/1‑116 (MQ=255)
                                                                                                                                        cAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGCCTGGTCCAGGCGCTGGCGCTGGTGa       >  5:357236/1‑147 (MQ=255)
                                                                                                                                        cAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGCCTGGTCCAGGCGCTGGCGCTGGTGa       >  4:134302/1‑147 (MQ=255)
                                                                                                                                        cAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGCCTGGTCCAGGCGCTGGCGCTGGTGa       >  3:14989/1‑147 (MQ=255)
                                                                                                                                        cAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGCCTGGTCCAGGCGCTGGCGCTGGTGATa     <  6:240864/149‑1 (MQ=255)
                                                                                                                                         aGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGTGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGCCTGGTCCAGGCGCTGGCGCTGGTGATAg    <  2:380143/149‑1 (MQ=255)
                                                                                                                                         aGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGCCTGGTCCAGGCGCTGGCGCTGGTGATAg    >  2:389236/1‑149 (MQ=255)
                                                                                                                                         aGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATACCCAGTTCCAGGCGCTCGCGCTGGAGATac    >  6:240956/1‑148 (MQ=255)
                                                                                                                                         aGCTTTTTGCCGGTGACAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGCCTGGTCCAGGCGCTGGCGCTGGTGATAg    <  3:233852/149‑1 (MQ=255)
                                                                                                                                           cTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGCCTGGTCCAGGCGCTGGCGCTGGTGATAGGc  <  7:236924/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                             
CGGCACCCAGGTACGGTGGGTAGAGGTTCAGCATCCAGCGCAGCATGCGCGCCCGGCGCGCCAGTTTACGCGGGTTGCTCATGCCTGGCCCCGCGGATCAGGGCGGGTGCCCAGGCCCATCGCCTGGCGGGCGAACCAGCTTTTTGCCGGTGGCAACAGGTCGAGCCCGAGCAGGCCAAGGTTGCGTCCGGCCGTCAGCAACGGCTGATTGCTGCCGAACAGGCGGGTGACCTGGTCGGAGAAGCCGATGGTCATAGCCTGGTCCAGGCGCTGGCGCTGGTGATAGGC  >  NC_002947/5930792‑5931079

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑