| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,070,778 | A→T | 6.3% | intergenic (‑134/+29) | PP_5324 ← / ← phoU | two‑component system response regulator/phosphate transport‑associated protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,070,778 | 0 | A | T | 6.3% | 274.1 / 7.6 | 95 | intergenic (‑134/+29) | PP_5324/phoU | two‑component system response regulator/phosphate transport‑associated protein |
| Reads supporting (aligned to +/- strand): ref base A (51/37); new base T (3/3); total (54/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.25e-01 | |||||||||||
CACTTTACTCATCGATACTCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTCGGTGCCGCGCACCA > NC_002947/6070633‑6070925 | cACTTTACTCATCGATACTCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAgg < 1:291024/148‑1 (MQ=255) cTTTACTCATCGATACTCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCg > 1:196359/1‑149 (MQ=255) tttACTCATCGATACTCCTTTTGAATCCCGTCTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCgg > 5:124956/1‑149 (MQ=255) ttACTCATCGATACTCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCggg > 4:296324/1‑149 (MQ=255) aCTCATCTATACTCCTTTTGAATCCCGACTAGCCTTCTGCCAATGATGGCCACTTGCTACAACCTGGTCTCGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGACGGCTCTCGACCGCAAACGAAAACGCCCGGCCTTGGCCGGGc < 4:163165/148‑1 (MQ=255) aCTCATCGATACTCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGc < 6:52691/148‑1 (MQ=255) cTCATCGATACTCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCTTGGCCGGGCg < 6:360679/148‑1 (MQ=255) aTCGATACTCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGa > 1:177064/1‑149 (MQ=255) tCGATACTCCTTTTGAATCCCGCCTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGAt < 6:147055/149‑1 (MQ=255) tCGATACTCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGAt < 6:153309/149‑1 (MQ=255) tCGATACTCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGAt < 3:306873/149‑1 (MQ=255) gATACTCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGACGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATg > 4:374958/1‑148 (MQ=255) aTACTCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCt > 5:64448/1‑149 (MQ=255) tCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCgg > 4:373760/1‑148 (MQ=255) tCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCgg > 1:160535/1‑148 (MQ=255) cTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCGTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGa < 3:302683/148‑1 (MQ=255) cTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGa < 5:386148/148‑1 (MQ=255) cTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAg > 2:265573/1‑149 (MQ=255) ttttGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAg > 3:116990/1‑148 (MQ=255) ttttGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAg > 3:278400/1‑148 (MQ=255) ttttGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAg > 3:295600/1‑148 (MQ=255) tttGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGc > 6:269442/1‑148 (MQ=255) gAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAAcc > 4:105511/1‑149 (MQ=255) aTCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACct > 5:55795/1‑148 (MQ=255) tCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACctta > 8:49310/1‑149 (MQ=255) tCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTGCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACctta < 3:330862/149‑1 (MQ=255) cggACTAGCCTACTGCAAATGATGGCCACTTCCTACAACCTGGTCACGCCGGATCTTCTTCAGATCGTTCGCGGGTGCCTGCCGGCTCTAGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACcttac < 7:133067/146‑1 (MQ=255) ccGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACcttac < 7:49310/148‑1 (MQ=255) cTAGGCTACTGCCAATGATGGCCACTTGCTTCAACCTGGTCACGCCGGGACTTCTTCACATCGTTGGCGGGTGCCTGCCGGCTCTCGACCGCATACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATc < 2:13352/149‑1 (MQ=255) ccTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCgg > 6:215994/1‑128 (MQ=255) ccTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCgg < 5:215994/128‑1 (MQ=255) ccTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGt > 7:147418/1‑147 (MQ=255) cTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGCCCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCATCCTTACTTATCGt > 6:292763/1‑146 (MQ=255) tACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACAAAAACGCCCGGCCAAgg > 6:171354/1‑108 (MQ=255) tACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACAAAAACGCCCGGCCAAgg < 5:171354/108‑1 (MQ=255) tcTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACTAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAg < 7:165913/146‑1 (MQ=255) ccAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAg > 8:165913/1‑143 (MQ=255) ccAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCAc < 6:124956/149‑1 (MQ=255) cAATGAAGGCCACTTGCTACAACGTCCGCACGCCGGTACTTCTTGACATGTTTCGCGGGTGCCTGGCGGCTCTCGACCGCAAACGAAAACGCCCTGCAAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCAcc < 5:148242/149‑1 (MQ=255) atgatgGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCg > 1:395578/1‑149 (MQ=255) atgGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACTGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGaa < 7:9111/149‑1 (MQ=255) gcccACTTGCTACAACGTGGACACGCCGGCATTTCTTCACATCTTCCGCGGGTCCCTCCCGGCTCTCTCCCCCAAACCAAACCCCCCGCCCACGCCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACa < 2:395578/147‑1 (MQ=255) cTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGc < 2:160535/149‑1 (MQ=255) gCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGcc < 2:122200/147‑1 (MQ=255) tACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCtttt > 5:130738/1‑149 (MQ=255) tACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCttt > 7:56306/1‑148 (MQ=255) cAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAAGCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCg > 5:333449/1‑149 (MQ=255) cTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGt < 5:269442/149‑1 (MQ=255) gTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACAtt < 5:332597/132‑1 (MQ=255) gTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACAtt > 6:332597/1‑132 (MQ=255) gTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTgg > 5:395648/1‑149 (MQ=255) gTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTgg > 1:291343/1‑149 (MQ=255) gTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACCCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTgg > 2:374715/1‑149 (MQ=255) aCGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGa < 3:296324/149‑1 (MQ=255) aCGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGa > 7:217024/1‑149 (MQ=255) cGCCGGGACTTCTTCACATCGTTCGCGGGGGCCTGCCGGCGCTCTACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGAc < 4:278400/149‑1 (MQ=255) gCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGAca < 3:373760/149‑1 (MQ=255) gCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGAca < 7:74747/149‑1 (MQ=255) ccGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGAcag > 8:108808/1‑149 (MQ=255) cGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCTTGGCCgg < 4:107765/73‑1 (MQ=255) cGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCTTGGCCgg > 3:107765/1‑73 (MQ=255) gggACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCTACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGAcagca < 8:147418/149‑1 (MQ=255) cttcttCACATCGTTCGGGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCTGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCTTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGc < 3:105511/149‑1 (MQ=255) cttcttCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCTGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGc < 3:362174/149‑1 (MQ=255) ttcttcACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGcc > 3:267174/1‑149 (MQ=255) cttcACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCt > 5:268468/1‑149 (MQ=255) cttcACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCt > 7:234842/1‑149 (MQ=255) ttcACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTg > 4:62739/1‑149 (MQ=255) ttcACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGCAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTg > 1:132875/1‑149 (MQ=255) acaTCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCa < 3:387426/148‑1 (MQ=255) acaTCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCAc > 2:288239/1‑149 (MQ=255) aTCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTCCTTATCGTCAGCTTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACtt > 4:225389/1‑149 (MQ=255) aTCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACt > 4:121018/1‑148 (MQ=255) gcgGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGt < 4:295600/149‑1 (MQ=255) cctgccGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATgcgc < 6:130738/149‑1 (MQ=255) ccGGCTCTCGACCGCAAACGAAATCGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCtt < 8:356289/147‑1 (MQ=255) gCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGc < 7:58709/149‑1 (MQ=255) cGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCAtg > 6:152451/1‑149 (MQ=255) cGACCGCAAACGAAAACGCCCGACCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCAtg > 2:316392/1‑149 (MQ=255) gACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCAtgt < 8:217024/149‑1 (MQ=255) gACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCAtgt > 4:195694/1‑149 (MQ=255) aaaCGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCa > 5:17621/1‑149 (MQ=255) gAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTc > 3:380935/1‑149 (MQ=255) gAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTc < 2:177064/149‑1 (MQ=255) gAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTACACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTc > 3:351189/1‑149 (MQ=255) gAAAACGCCCGCCCAAGGCCGGGCGTCGATGCTCGCGAGCAACCTTACATATCGTCAGATTCACACGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCAGTCATGCGCTAGAGGCCCATGTGGAGCACGTc > 8:303402/1‑149 (MQ=255) aaaaCGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTCg < 3:62739/149‑1 (MQ=255) cGCCCGGCCTTGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTCGGTGc > 6:259097/1‑149 (MQ=255) cGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACAATAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTCGGTGc < 4:267174/149‑1 (MQ=255) gCCCGGCCTTGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTCGGTGcc > 5:378221/1‑149 (MQ=255) gCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTCGGTGcc > 1:263667/1‑149 (MQ=255) ccGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTCGGTGCcgc > 5:326047/1‑149 (MQ=255) ccGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTCGGTGCcgc > 1:160688/1‑149 (MQ=255) ccGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTCGGTGCcgc > 8:40477/1‑149 (MQ=255) ccAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTCGGTGCCGCGCAc > 4:43836/1‑149 (MQ=255) aaGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTCGGTGCCGCGCACCa < 2:263667/149‑1 (MQ=255) | CACTTTACTCATCGATACTCCTTTTGAATCCCGACTAGCCTACTGCCAATGATGGCCACTTGCTACAACCTGGTCACGCCGGGACTTCTTCACATCGTTCGCGGGTGCCTGCCGGCTCTCGACCGCAAACGAAAACGCCCGGCCAAGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTCGGTGCCGCGCACCA > NC_002947/6070633‑6070925 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |